RNA–Protein interactions for RNA: ENST00000216639.7

VRK1-201, Transcript of vaccinia related kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VRK1, Length 1,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-201ENST00000216639 ZNF654Q8IZM8 581 aa20.26■□□□□ 0.83
VRK1-201ENST00000216639 ZC3H12CQ9C0D7 883 aaKnown RBP20.26■□□□□ 0.83
VRK1-201ENST00000216639 STK32BQ9NY57 414 aa20.26■□□□□ 0.83
VRK1-201ENST00000216639 DDX52Q9Y2R4 599 aaKnown RBP eCLIP20.26■□□□□ 0.83
VRK1-201ENST00000216639 MYH15Q9Y2K3 1946 aa20.26■□□□□ 0.83
VRK1-201ENST00000216639 FAM205AQ6ZU69 1335 aa20.26■□□□□ 0.83
VRK1-201ENST00000216639 IFNAR1P17181 557 aa20.25■□□□□ 0.83
VRK1-201ENST00000216639 DIXDC1Q155Q3 683 aa20.25■□□□□ 0.83
VRK1-201ENST00000216639 NTRK3Q16288 839 aa20.25■□□□□ 0.83
VRK1-201ENST00000216639 MSL1Q68DK7 614 aa20.25■□□□□ 0.83
VRK1-201ENST00000216639 DPP8Q6V1X1 898 aaPredicted RBP20.25■□□□□ 0.83
VRK1-201ENST00000216639 TSPY26PQ9H489 355 aa20.25■□□□□ 0.83
VRK1-201ENST00000216639 FAM217BQ9NTX9 383 aaPredicted RBP20.25■□□□□ 0.83
VRK1-201ENST00000216639 RGS17Q9UGC6 210 aaPredicted RBP20.25■□□□□ 0.83
VRK1-201ENST00000216639 FMNL1O95466 1100 aaPredicted RBP20.24■□□□□ 0.83
VRK1-201ENST00000216639 CALM1P0DP23 149 aa20.24■□□□□ 0.83
VRK1-201ENST00000216639 CALM2P0DP24 149 aa20.24■□□□□ 0.83
VRK1-201ENST00000216639 CALM3P0DP25 149 aa20.24■□□□□ 0.83
VRK1-201ENST00000216639 SLC15A2Q16348 729 aa20.24■□□□□ 0.83
VRK1-201ENST00000216639 IFIT1BQ5T764 474 aaKnown RBP20.24■□□□□ 0.83
VRK1-201ENST00000216639 POTEAQ6S8J7 498 aa20.24■□□□□ 0.83
VRK1-201ENST00000216639 CATIPQ7Z7H3 387 aa20.24■□□□□ 0.83
VRK1-201ENST00000216639 SH3RF3Q8TEJ3 882 aaPredicted RBP20.24■□□□□ 0.83
VRK1-201ENST00000216639 PRDM1O75626 825 aa20.24■□□□□ 0.83
VRK1-201ENST00000216639 FANCBQ8NB91 859 aa20.24■□□□□ 0.83
VRK1-201ENST00000216639 NUP133Q8WUM0 1156 aa20.24■□□□□ 0.83
VRK1-201ENST00000216639 PHKBQ93100 1093 aa20.24■□□□□ 0.83
VRK1-201ENST00000216639 EYA3Q99504 573 aa20.24■□□□□ 0.83
VRK1-201ENST00000216639 SLC26A6Q9BXS9 759 aa20.24■□□□□ 0.83
VRK1-201ENST00000216639 RTFDC1Q9BY42 306 aaPredicted RBP20.24■□□□□ 0.83
VRK1-201ENST00000216639 PANK2Q9BZ23 570 aa20.24■□□□□ 0.83
VRK1-201ENST00000216639 RCOR1Q9UKL0 485 aa20.24■□□□□ 0.83
VRK1-201ENST00000216639 SUGT1Q9Y2Z0 365 aa20.24■□□□□ 0.83
VRK1-201ENST00000216639 GPR75-ASB3A0A0A6YYF3 556 aa20.23■□□□□ 0.83
VRK1-201ENST00000216639 BTDP43251 543 aa20.23■□□□□ 0.83
VRK1-201ENST00000216639 GRIK5Q16478 980 aa20.23■□□□□ 0.83
VRK1-201ENST00000216639 OTUD7BQ6GQQ9 843 aa20.23■□□□□ 0.83
VRK1-201ENST00000216639 ENAHQ8N8S7 591 aaPredicted RBP20.23■□□□□ 0.83
VRK1-201ENST00000216639 BICD2Q8TD16 824 aa20.23■□□□□ 0.83
VRK1-201ENST00000216639 ZNF622Q969S3 477 aaKnown RBP eCLIP20.23■□□□□ 0.832e-8■□□□□ 9.4
VRK1-201ENST00000216639 FAM163AQ96GL9 167 aaPredicted RBP20.23■□□□□ 0.83
VRK1-201ENST00000216639 MKRN1Q9UHC7 482 aaKnown RBP20.23■□□□□ 0.83
VRK1-201ENST00000216639 H0YIN7 160 aa20.22■□□□□ 0.83
VRK1-201ENST00000216639 RIMBP2O15034 1052 aa20.22■□□□□ 0.83
VRK1-201ENST00000216639 EZH2Q15910 746 aaKnown RBP20.22■□□□□ 0.83
VRK1-201ENST00000216639 C12orf60Q5U649 245 aa20.22■□□□□ 0.83
VRK1-201ENST00000216639 STYK1Q6J9G0 422 aa20.22■□□□□ 0.83
VRK1-201ENST00000216639 C2CD5Q86YS7 1000 aa20.22■□□□□ 0.83
VRK1-201ENST00000216639 CAMKK2Q96RR4 588 aa20.22■□□□□ 0.83
VRK1-201ENST00000216639 G3V3G9 751 aa20.22■□□□□ 0.83
VRK1-201ENST00000216639 SMIM22K7EJ46 135 aa20.22■□□□□ 0.83
VRK1-201ENST00000216639 USP17L8P0C7I0 530 aa20.22■□□□□ 0.83
VRK1-201ENST00000216639 GTF2IP78347 998 aa20.22■□□□□ 0.83
VRK1-201ENST00000216639 CEBPZQ03701 1054 aaKnown RBP20.22■□□□□ 0.83
VRK1-201ENST00000216639 GNL2Q13823 731 aaKnown RBP20.22■□□□□ 0.83
VRK1-201ENST00000216639 DCAF8Q5TAQ9 597 aa20.22■□□□□ 0.83
VRK1-201ENST00000216639 USP28Q96RU2 1077 aa20.22■□□□□ 0.83
VRK1-201ENST00000216639 RBSNQ9H1K0 784 aa20.22■□□□□ 0.83
VRK1-201ENST00000216639 RBM28Q9NW13 759 aaKnown RBP20.22■□□□□ 0.83
VRK1-201ENST00000216639 MYH2Q9UKX2 1941 aa20.21■□□□□ 0.83
VRK1-201ENST00000216639 COL11A2P13942 1736 aaPredicted RBP20.21■□□□□ 0.83
VRK1-201ENST00000216639 TSPY2A6NKD2 308 aa20.21■□□□□ 0.83
VRK1-201ENST00000216639 DDAH1O94760 285 aa20.21■□□□□ 0.83
VRK1-201ENST00000216639 CYP2D6P10635 497 aa20.21■□□□□ 0.83
VRK1-201ENST00000216639 KIF23Q02241 960 aaPredicted RBP20.21■□□□□ 0.83
VRK1-201ENST00000216639 EN1Q05925 392 aaPredicted RBP20.21■□□□□ 0.83
VRK1-201ENST00000216639 KRT40Q6A162 431 aa20.21■□□□□ 0.83
VRK1-201ENST00000216639 TGFBRAP1Q8WUH2 860 aa20.21■□□□□ 0.83
VRK1-201ENST00000216639 ZNF287Q9HBT7 754 aa20.21■□□□□ 0.83
VRK1-201ENST00000216639 DDX19AQ9NUU7 478 aaKnown RBP20.21■□□□□ 0.83
VRK1-201ENST00000216639 RTEL1Q9NZ71 1219 aa20.21■□□□□ 0.83
VRK1-201ENST00000216639 DEXIO95424 95 aa20.2■□□□□ 0.82
VRK1-201ENST00000216639 CCDC178Q5BJE1 867 aa20.2■□□□□ 0.82
VRK1-201ENST00000216639 ROBO3Q96MS0 1386 aa20.2■□□□□ 0.82
VRK1-201ENST00000216639 POLR3DP05423 398 aaPredicted RBP20.19■□□□□ 0.82
VRK1-201ENST00000216639 AKAP17AQ02040 695 aaKnown RBP20.19■□□□□ 0.82
VRK1-201ENST00000216639 MYSM1Q5VVJ2 828 aa20.19■□□□□ 0.82
VRK1-201ENST00000216639 TEX11Q8IYF3 940 aa20.19■□□□□ 0.82
VRK1-201ENST00000216639 CRACR2BQ8N4Y2 399 aaPredicted RBP20.19■□□□□ 0.82
VRK1-201ENST00000216639 PGBD1Q96JS3 809 aa20.19■□□□□ 0.82
VRK1-201ENST00000216639 NUP62CLQ9H1M0 184 aa20.19■□□□□ 0.82
VRK1-201ENST00000216639 GAKO14976 1311 aa20.19■□□□□ 0.82
VRK1-201ENST00000216639 DLEC1Q9Y238 1755 aa20.19■□□□□ 0.82
VRK1-201ENST00000216639 SF3B2Q13435 895 aaKnown RBP20.19■□□□□ 0.82
VRK1-201ENST00000216639 SAFBQ15424 915 aaKnown RBP eCLIP20.19■□□□□ 0.82
VRK1-201ENST00000216639 FBXW7Q969H0 707 aa20.19■□□□□ 0.82
VRK1-201ENST00000216639 AIFM3Q96NN9 605 aa20.19■□□□□ 0.82
VRK1-201ENST00000216639 MKNK2Q9HBH9 465 aa20.19■□□□□ 0.82
VRK1-201ENST00000216639 ANO8Q9HCE9 1232 aaPredicted RBP20.19■□□□□ 0.82
VRK1-201ENST00000216639 POLR3EQ9NVU0 708 aa20.19■□□□□ 0.82
VRK1-201ENST00000216639 NAV1Q8NEY1 1877 aa20.18■□□□□ 0.82
VRK1-201ENST00000216639 QSER1Q2KHR3 1735 aa20.18■□□□□ 0.82
VRK1-201ENST00000216639 YEATS4O95619 227 aa20.18■□□□□ 0.82
VRK1-201ENST00000216639 LIG1P18858 919 aa20.18■□□□□ 0.82
VRK1-201ENST00000216639 KCNG4Q8TDN1 519 aa20.18■□□□□ 0.82
VRK1-201ENST00000216639 CNKSR1Q969H4 720 aa20.18■□□□□ 0.82
VRK1-201ENST00000216639 RNF26Q9BY78 433 aaPredicted RBP20.18■□□□□ 0.82
VRK1-201ENST00000216639 ME1P48163 572 aa20.17■□□□□ 0.82
VRK1-201ENST00000216639 CCDC173Q0VFZ6 552 aa20.17■□□□□ 0.82
VRK1-201ENST00000216639 STK38Q15208 465 aa20.17■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms