RNA–Protein interactions for RNA: ENST00000216211.8

UPK3A-201, Transcript of uroplakin 3A, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene UPK3A, Length 1,051 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3A-201ENST00000216211 TRIM75PA6NK02 468 aa18.4■□□□□ 0.54
UPK3A-201ENST00000216211 BCRP11274 1271 aa18.4■□□□□ 0.54
UPK3A-201ENST00000216211 OSBPP22059 807 aa18.4■□□□□ 0.54
UPK3A-201ENST00000216211 NAA16Q6N069 864 aaPredicted RBP18.4■□□□□ 0.54
UPK3A-201ENST00000216211 NOL10Q9BSC4 688 aaKnown RBP18.4■□□□□ 0.54
UPK3A-201ENST00000216211 AATFQ9NY61 560 aaKnown RBP eCLIP18.4■□□□□ 0.54
UPK3A-201ENST00000216211 SRRDQ9UH36 339 aa18.4■□□□□ 0.54
UPK3A-201ENST00000216211 NOP58Q9Y2X3 529 aaKnown RBP18.4■□□□□ 0.54
UPK3A-201ENST00000216211 MYH1P12882 1939 aa18.39■□□□□ 0.53
UPK3A-201ENST00000216211 CYP2E1P05181 493 aaPredicted RBP18.39■□□□□ 0.53
UPK3A-201ENST00000216211 CCDC8Q9H0W5 538 aaPredicted RBP18.39■□□□□ 0.53
UPK3A-201ENST00000216211 TLR7Q9NYK1 1049 aaKnown RBP18.39■□□□□ 0.53
UPK3A-201ENST00000216211 HOXD10P28358 340 aa18.38■□□□□ 0.53
UPK3A-201ENST00000216211 ZAP70P43403 619 aa18.38■□□□□ 0.53
UPK3A-201ENST00000216211 ADGRA1Q86SQ6 560 aa18.38■□□□□ 0.53
UPK3A-201ENST00000216211 RAET1EQ8TD07 263 aa18.38■□□□□ 0.53
UPK3A-201ENST00000216211 SLC45A1Q9Y2W3 748 aa18.38■□□□□ 0.53
UPK3A-201ENST00000216211 ZBED9Q6R2W3 1325 aa18.38■□□□□ 0.53
UPK3A-201ENST00000216211 MYPNQ86TC9 1320 aa18.38■□□□□ 0.53
UPK3A-201ENST00000216211 DOCK3Q8IZD9 2030 aa18.37■□□□□ 0.53
UPK3A-201ENST00000216211 BAG3O95817 575 aa18.37■□□□□ 0.53
UPK3A-201ENST00000216211 RRP1BQ14684 758 aaKnown RBP18.37■□□□□ 0.53
UPK3A-201ENST00000216211 ZNF512BQ96KM6 892 aaPredicted RBP18.37■□□□□ 0.53
UPK3A-201ENST00000216211 PIH1D3Q9NQM4 214 aaKnown RBP18.37■□□□□ 0.53
UPK3A-201ENST00000216211 DBNLQ9UJU6 430 aaKnown RBP18.37■□□□□ 0.53
UPK3A-201ENST00000216211 FCGRTP55899 365 aa18.36■□□□□ 0.53
UPK3A-201ENST00000216211 PRKCZQ05513 592 aa18.36■□□□□ 0.53
UPK3A-201ENST00000216211 MTFR1Q15390 333 aa18.36■□□□□ 0.53
UPK3A-201ENST00000216211 TREML2Q5T2D2 321 aa18.36■□□□□ 0.53
UPK3A-201ENST00000216211 CEP85Q6P2H3 762 aa18.36■□□□□ 0.53
UPK3A-201ENST00000216211 MAPKAPK5Q8IW41 473 aa18.36■□□□□ 0.53
UPK3A-201ENST00000216211 PANK1Q8TE04 598 aa18.36■□□□□ 0.53
UPK3A-201ENST00000216211 TGFBRAP1Q8WUH2 860 aa18.36■□□□□ 0.53
UPK3A-201ENST00000216211 EAF2Q96CJ1 260 aaPredicted RBP18.36■□□□□ 0.53
UPK3A-201ENST00000216211 AGTPBP1Q9UPW5 1226 aa18.36■□□□□ 0.53
UPK3A-201ENST00000216211 GRK4P32298 578 aa18.35■□□□□ 0.53
UPK3A-201ENST00000216211 CAP2P40123 477 aa18.35■□□□□ 0.53
UPK3A-201ENST00000216211 PPP4CP60510 307 aa18.35■□□□□ 0.53
UPK3A-201ENST00000216211 SPP2Q13103 211 aa18.35■□□□□ 0.53
UPK3A-201ENST00000216211 PI4KBQ9UBF8 816 aa18.35■□□□□ 0.53
UPK3A-201ENST00000216211 HERC5Q9UII4 1024 aaKnown RBP18.35■□□□□ 0.53
UPK3A-201ENST00000216211 GABRQQ9UN88 632 aa18.35■□□□□ 0.53
UPK3A-201ENST00000216211 EXOC6BQ9Y2D4 811 aa18.35■□□□□ 0.53
UPK3A-201ENST00000216211 FLT1P17948 1338 aa18.34■□□□□ 0.53
UPK3A-201ENST00000216211 PLCG2P16885 1265 aa18.34■□□□□ 0.53
UPK3A-201ENST00000216211 DYNLL1P63167 89 aaKnown RBP18.34■□□□□ 0.53
UPK3A-201ENST00000216211 ZNF280CQ8ND82 737 aa18.34■□□□□ 0.53
UPK3A-201ENST00000216211 SMCR8Q8TEV9 937 aaPredicted RBP18.34■□□□□ 0.53
UPK3A-201ENST00000216211 DHX36Q9H2U1 1008 aaKnown RBP18.34■□□□□ 0.53
UPK3A-201ENST00000216211 NDUFB9Q9Y6M9 179 aa18.34■□□□□ 0.53
UPK3A-201ENST00000216211 USP17L5A8MUK1 530 aa18.33■□□□□ 0.52
UPK3A-201ENST00000216211 HMGCS2P54868 508 aa18.33■□□□□ 0.52
UPK3A-201ENST00000216211 PROCA1Q8NCQ7 364 aaPredicted RBP18.33■□□□□ 0.52
UPK3A-201ENST00000216211 TBC1D2Q9BYX2 928 aa18.33■□□□□ 0.52
UPK3A-201ENST00000216211 CYP7A1P22680 504 aa18.32■□□□□ 0.52
UPK3A-201ENST00000216211 ANKRD13CQ8N6S4 541 aa18.32■□□□□ 0.52
UPK3A-201ENST00000216211 DNAJC18Q9H819 358 aa18.32■□□□□ 0.52
UPK3A-201ENST00000216211 BIN2Q9UBW5 565 aaPredicted RBP18.32■□□□□ 0.52
UPK3A-201ENST00000216211 SAP30BPQ9UHR5 308 aaKnown RBP18.32■□□□□ 0.52
UPK3A-201ENST00000216211 PNMA3Q9UL41 463 aa18.32■□□□□ 0.52
UPK3A-201ENST00000216211 PALD1Q9ULE6 856 aa18.32■□□□□ 0.52
UPK3A-201ENST00000216211 IGSF3O75054 1194 aa18.31■□□□□ 0.52
UPK3A-201ENST00000216211 IDH1O75874 414 aaKnown RBP18.31■□□□□ 0.52
UPK3A-201ENST00000216211 CRACR2BQ8N4Y2 399 aaPredicted RBP18.31■□□□□ 0.52
UPK3A-201ENST00000216211 SHISA4Q96DD7 197 aa18.31■□□□□ 0.52
UPK3A-201ENST00000216211 AS3MTQ9HBK9 375 aa18.31■□□□□ 0.52
UPK3A-201ENST00000216211 TNPO2O14787 897 aaKnown RBP18.3■□□□□ 0.52
UPK3A-201ENST00000216211 CCL5P13501 91 aa18.3■□□□□ 0.52
UPK3A-201ENST00000216211 FLT3LGP49771 235 aa18.3■□□□□ 0.52
UPK3A-201ENST00000216211 UBXN2AP68543 259 aa18.3■□□□□ 0.52
UPK3A-201ENST00000216211 JAG1P78504 1218 aa18.3■□□□□ 0.52
UPK3A-201ENST00000216211 SHROOM1Q2M3G4 852 aaPredicted RBP18.3■□□□□ 0.52
UPK3A-201ENST00000216211 AACSQ86V21 672 aa18.3■□□□□ 0.52
UPK3A-201ENST00000216211 ERC1Q8IUD2 1116 aa18.3■□□□□ 0.52
UPK3A-201ENST00000216211 MIGA1Q8NAN2 632 aa18.3■□□□□ 0.52
UPK3A-201ENST00000216211 SLAIN1Q8ND83 568 aa18.3■□□□□ 0.52
UPK3A-201ENST00000216211 GCC1Q96CN9 775 aa18.3■□□□□ 0.52
UPK3A-201ENST00000216211 TRIM34Q9BYJ4 488 aa18.3■□□□□ 0.52
UPK3A-201ENST00000216211 ANTXR1Q9H6X2 564 aa18.3■□□□□ 0.52
UPK3A-201ENST00000216211 NAV1Q8NEY1 1877 aa18.3■□□□□ 0.52
UPK3A-201ENST00000216211 PLXNB2O15031 1838 aa18.29■□□□□ 0.52
UPK3A-201ENST00000216211 ADCY3O60266 1144 aa18.29■□□□□ 0.52
UPK3A-201ENST00000216211 GDF11O95390 407 aa18.29■□□□□ 0.52
UPK3A-201ENST00000216211 FAM110CQ1W6H9 321 aa18.29■□□□□ 0.52
UPK3A-201ENST00000216211 SH3D19Q5HYK7 790 aa18.29■□□□□ 0.52
UPK3A-201ENST00000216211 METTL16Q86W50 562 aaKnown RBP18.29■□□□□ 0.52
UPK3A-201ENST00000216211 FOXP4Q8IVH2 680 aaPredicted RBP18.29■□□□□ 0.52
UPK3A-201ENST00000216211 MAGEB6Q8N7X4 407 aa18.29■□□□□ 0.52
UPK3A-201ENST00000216211 RNF208Q9H0X6 261 aa18.29■□□□□ 0.52
UPK3A-201ENST00000216211 IL1RAPL2Q9NP60 686 aa18.29■□□□□ 0.52
UPK3A-201ENST00000216211 HLA-DOAP06340 250 aa18.28■□□□□ 0.52
UPK3A-201ENST00000216211 ASNSP08243 561 aa18.28■□□□□ 0.52
UPK3A-201ENST00000216211 ELNP15502 786 aa18.28■□□□□ 0.52
UPK3A-201ENST00000216211 PABPC4Q13310 644 aaKnown RBP eCLIP18.28■□□□□ 0.52
UPK3A-201ENST00000216211 MTMR2Q13614 643 aa18.28■□□□□ 0.52
UPK3A-201ENST00000216211 WDR18Q9BV38 432 aa18.28■□□□□ 0.52
UPK3A-201ENST00000216211 ASCC2Q9H1I8 757 aaPredicted RBP18.28■□□□□ 0.52
UPK3A-201ENST00000216211 DDX60LQ5H9U9 1706 aaKnown RBP18.27■□□□□ 0.52
UPK3A-201ENST00000216211 APBB1O00213 710 aa18.27■□□□□ 0.52
UPK3A-201ENST00000216211 USP5P45974 858 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms