RNA–Protein interactions for RNA: ENST00000216155.11

SYNGR1-201, Transcript of synaptogyrin 1, humanhuman

TSL 3 BASIC

Gene SYNGR1, Length 497 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-201ENST00000216155 UBXN2AP68543 259 aa24.23■■□□□ 1.47
SYNGR1-201ENST00000216155 UBE2Q1Q7Z7E8 422 aa24.23■■□□□ 1.47
SYNGR1-201ENST00000216155 RNF208Q9H0X6 261 aa24.23■■□□□ 1.47
SYNGR1-201ENST00000216155 BIN2Q9UBW5 565 aaPredicted RBP24.23■■□□□ 1.47
SYNGR1-201ENST00000216155 FLT3LGP49771 235 aa24.22■■□□□ 1.47
SYNGR1-201ENST00000216155 RRP1BQ14684 758 aaKnown RBP24.22■■□□□ 1.47
SYNGR1-201ENST00000216155 TEX11Q8IYF3 940 aa24.22■■□□□ 1.47
SYNGR1-201ENST00000216155 LRP2BPQ9P2M1 347 aa24.22■■□□□ 1.47
SYNGR1-201ENST00000216155 CDK5RAP2Q96SN8 1893 aa24.21■■□□□ 1.47
SYNGR1-201ENST00000216155 TNPO2O14787 897 aaKnown RBP24.21■■□□□ 1.47
SYNGR1-201ENST00000216155 POLA2Q14181 598 aa24.21■■□□□ 1.47
SYNGR1-201ENST00000216155 ANKRD13CQ8N6S4 541 aa24.21■■□□□ 1.47
SYNGR1-201ENST00000216155 PROCA1Q8NCQ7 364 aaPredicted RBP24.21■■□□□ 1.47
SYNGR1-201ENST00000216155 SH3RF3Q8TEJ3 882 aaPredicted RBP24.21■■□□□ 1.47
SYNGR1-201ENST00000216155 PNMA3Q9UL41 463 aa24.21■■□□□ 1.47
SYNGR1-201ENST00000216155 FOCADQ5VW36 1801 aa24.2■■□□□ 1.46
SYNGR1-201ENST00000216155 ADCY3O60266 1144 aa24.2■■□□□ 1.46
SYNGR1-201ENST00000216155 ELNP15502 786 aa24.2■■□□□ 1.46
SYNGR1-201ENST00000216155 CAP2P40123 477 aa24.2■■□□□ 1.46
SYNGR1-201ENST00000216155 SPP2Q13103 211 aa24.2■■□□□ 1.46
SYNGR1-201ENST00000216155 IRF5Q13568 498 aa24.2■■□□□ 1.46
SYNGR1-201ENST00000216155 TNNI3KQ59H18 835 aa24.2■■□□□ 1.46
SYNGR1-201ENST00000216155 ZNF280CQ8ND82 737 aa24.2■■□□□ 1.46
SYNGR1-201ENST00000216155 DBNDD2Q9BQY9 259 aa24.2■■□□□ 1.46
SYNGR1-201ENST00000216155 UNC93B1Q9H1C4 597 aa24.2■■□□□ 1.46
SYNGR1-201ENST00000216155 GPR108Q9NPR9 543 aa24.2■■□□□ 1.46
SYNGR1-201ENST00000216155 FPGT-TNNI3KV9GXZ4 949 aa24.2■■□□□ 1.46
SYNGR1-201ENST00000216155 RANBP2P49792 3224 aaKnown RBP24.19■■□□□ 1.46
SYNGR1-201ENST00000216155 DOCK3Q8IZD9 2030 aa24.19■■□□□ 1.46
SYNGR1-201ENST00000216155 FAM110CQ1W6H9 321 aa24.19■■□□□ 1.46
SYNGR1-201ENST00000216155 ZKSCAN2Q63HK3 967 aa24.19■■□□□ 1.46
SYNGR1-201ENST00000216155 U2AF1L4Q8WU68 220 aaKnown RBP24.19■■□□□ 1.46
SYNGR1-201ENST00000216155 SNRKQ9NRH2 765 aa24.19■■□□□ 1.46
SYNGR1-201ENST00000216155 AATFQ9NY61 560 aaKnown RBP eCLIP24.19■■□□□ 1.46
SYNGR1-201ENST00000216155 MYO5AQ9Y4I1 1855 aaKnown RBP24.19■■□□□ 1.46
SYNGR1-201ENST00000216155 INHAP05111 366 aa24.18■■□□□ 1.46
SYNGR1-201ENST00000216155 HMGCS2P54868 508 aa24.18■■□□□ 1.46
SYNGR1-201ENST00000216155 TTC39AQ5SRH9 613 aa24.18■■□□□ 1.46
SYNGR1-201ENST00000216155 NAA16Q6N069 864 aaPredicted RBP24.18■■□□□ 1.46
SYNGR1-201ENST00000216155 SSH3Q8TE77 659 aa24.18■■□□□ 1.46
SYNGR1-201ENST00000216155 PXYLP1Q8TE99 480 aa24.18■■□□□ 1.46
SYNGR1-201ENST00000216155 TBC1D2Q9BYX2 928 aa24.18■■□□□ 1.46
SYNGR1-201ENST00000216155 HERC5Q9UII4 1024 aaKnown RBP24.18■■□□□ 1.46
SYNGR1-201ENST00000216155 TRIOBPQ9H2D6 2365 aa24.17■■□□□ 1.46
SYNGR1-201ENST00000216155 SZT2Q5T011 3432 aa24.17■■□□□ 1.46
SYNGR1-201ENST00000216155 ADGRA1Q86SQ6 560 aa24.17■■□□□ 1.46
SYNGR1-201ENST00000216155 NOL10Q9BSC4 688 aaKnown RBP24.17■■□□□ 1.46
SYNGR1-201ENST00000216155 C1orf115Q9H7X2 142 aa24.17■■□□□ 1.46
SYNGR1-201ENST00000216155 USP17L5A8MUK1 530 aa24.16■■□□□ 1.46
SYNGR1-201ENST00000216155 CYP2E1P05181 493 aaPredicted RBP24.16■■□□□ 1.46
SYNGR1-201ENST00000216155 DPF3Q92784 378 aa24.16■■□□□ 1.46
SYNGR1-201ENST00000216155 PI4KBQ9UBF8 816 aa24.16■■□□□ 1.46
SYNGR1-201ENST00000216155 FLT1P17948 1338 aa24.15■■□□□ 1.46
SYNGR1-201ENST00000216155 FARP2O94887 1054 aaPredicted RBP24.15■■□□□ 1.46
SYNGR1-201ENST00000216155 BAG3O95817 575 aa24.15■■□□□ 1.46
SYNGR1-201ENST00000216155 ATP8B2P98198 1209 aa24.15■■□□□ 1.46
SYNGR1-201ENST00000216155 OS9Q13438 667 aaPredicted RBP24.15■■□□□ 1.46
SYNGR1-201ENST00000216155 SH3D19Q5HYK7 790 aa24.15■■□□□ 1.46
SYNGR1-201ENST00000216155 CCDC158Q5M9N0 1113 aa24.15■■□□□ 1.46
SYNGR1-201ENST00000216155 COA7Q96BR5 231 aa24.15■■□□□ 1.46
SYNGR1-201ENST00000216155 DHX36Q9H2U1 1008 aaKnown RBP24.15■■□□□ 1.46
SYNGR1-201ENST00000216155 DNAJC18Q9H819 358 aa24.15■■□□□ 1.46
SYNGR1-201ENST00000216155 SGPL1O95470 568 aa24.14■■□□□ 1.45
SYNGR1-201ENST00000216155 PLCG2P16885 1265 aa24.14■■□□□ 1.45
SYNGR1-201ENST00000216155 PPP4CP60510 307 aa24.14■■□□□ 1.45
SYNGR1-201ENST00000216155 CHRDL2Q6WN34 429 aa24.14■■□□□ 1.45
SYNGR1-201ENST00000216155 MAPKAPK5Q8IW41 473 aa24.14■■□□□ 1.45
SYNGR1-201ENST00000216155 TGFBRAP1Q8WUH2 860 aa24.14■■□□□ 1.45
SYNGR1-201ENST00000216155 HTATIP2Q9BUP3 242 aa24.14■■□□□ 1.45
SYNGR1-201ENST00000216155 ASCC2Q9H1I8 757 aaPredicted RBP24.14■■□□□ 1.45
SYNGR1-201ENST00000216155 TAOK2Q9UL54 1235 aa24.14■■□□□ 1.45
SYNGR1-201ENST00000216155 SURF6O75683 361 aaKnown RBP24.13■■□□□ 1.45
SYNGR1-201ENST00000216155 GCLCP48506 637 aaPredicted RBP24.13■■□□□ 1.45
SYNGR1-201ENST00000216155 PABPC4Q13310 644 aaKnown RBP eCLIP24.13■■□□□ 1.45
SYNGR1-201ENST00000216155 ZNF512BQ96KM6 892 aaPredicted RBP24.13■■□□□ 1.45
SYNGR1-201ENST00000216155 AS3MTQ9HBK9 375 aa24.13■■□□□ 1.45
SYNGR1-201ENST00000216155 PAK6Q9NQU5 681 aaPredicted RBP24.13■■□□□ 1.45
SYNGR1-201ENST00000216155 DBNLQ9UJU6 430 aaKnown RBP24.13■■□□□ 1.45
SYNGR1-201ENST00000216155 ZAP70P43403 619 aa24.12■■□□□ 1.45
SYNGR1-201ENST00000216155 JAG1P78504 1218 aa24.12■■□□□ 1.45
SYNGR1-201ENST00000216155 MTMR2Q13614 643 aa24.12■■□□□ 1.45
SYNGR1-201ENST00000216155 SHROOM1Q2M3G4 852 aaPredicted RBP24.12■■□□□ 1.45
SYNGR1-201ENST00000216155 METTL16Q86W50 562 aaKnown RBP24.12■■□□□ 1.45
SYNGR1-201ENST00000216155 DEFB118Q96PH6 123 aa24.12■■□□□ 1.45
SYNGR1-201ENST00000216155 WDR18Q9BV38 432 aa24.12■■□□□ 1.45
SYNGR1-201ENST00000216155 PIH1D3Q9NQM4 214 aaKnown RBP24.12■■□□□ 1.45
SYNGR1-201ENST00000216155 TLR7Q9NYK1 1049 aaKnown RBP24.12■■□□□ 1.45
SYNGR1-201ENST00000216155 ASNSP08243 561 aa24.11■■□□□ 1.45
SYNGR1-201ENST00000216155 FTSJ3Q8IY81 847 aaKnown RBP24.11■■□□□ 1.45
SYNGR1-201ENST00000216155 NOP58Q9Y2X3 529 aaKnown RBP24.11■■□□□ 1.45
SYNGR1-201ENST00000216155 PLXNB2O15031 1838 aa24.11■■□□□ 1.45
SYNGR1-201ENST00000216155 RLBP1P12271 317 aa24.1■■□□□ 1.45
SYNGR1-201ENST00000216155 BACE1P56817 501 aa24.1■■□□□ 1.45
SYNGR1-201ENST00000216155 ITPRIPQ8IWB1 547 aa24.1■■□□□ 1.45
SYNGR1-201ENST00000216155 RBM27Q9P2N5 1060 aaKnown RBP24.1■■□□□ 1.45
SYNGR1-201ENST00000216155 PALD1Q9ULE6 856 aa24.1■■□□□ 1.45
SYNGR1-201ENST00000216155 CRISPLD2Q9H0B8 497 aa24.09■■□□□ 1.45
SYNGR1-201ENST00000216155 IGSF3O75054 1194 aa24.08■■□□□ 1.45
SYNGR1-201ENST00000216155 GDF11O95390 407 aa24.08■■□□□ 1.45
SYNGR1-201ENST00000216155 CRACR2BQ8N4Y2 399 aaPredicted RBP24.08■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 70 ms