RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 ARHGEF10O15013 1369 aa21.14■□□□□ 0.97
MBD3-201ENST00000156825 PPARDQ03181 441 aa21.14■□□□□ 0.97
MBD3-201ENST00000156825 FRMD4BQ9Y2L6 1034 aa21.14■□□□□ 0.97
MBD3-201ENST00000156825 NFE2L3Q9Y4A8 694 aa21.14■□□□□ 0.97
MBD3-201ENST00000156825 YEATS2Q9ULM3 1422 aa21.13■□□□□ 0.97
MBD3-201ENST00000156825 ERVV-2B6SEH9 535 aa21.13■□□□□ 0.97
MBD3-201ENST00000156825 NONOQ15233 471 aaKnown RBP eCLIP21.13■□□□□ 0.975e-7■■■□□ 15.6
MBD3-201ENST00000156825 MICALCLQ6ZW33 695 aa21.13■□□□□ 0.97
MBD3-201ENST00000156825 TAB2Q9NYJ8 693 aa21.13■□□□□ 0.97
MBD3-201ENST00000156825 MAP3K9P80192 1104 aa21.13■□□□□ 0.97
MBD3-201ENST00000156825 NCBP1Q09161 790 aaKnown RBP21.13■□□□□ 0.97
MBD3-201ENST00000156825 SH2D4AQ9H788 454 aa21.13■□□□□ 0.97
MBD3-201ENST00000156825 TTF2Q9UNY4 1162 aaKnown RBP21.13■□□□□ 0.97
MBD3-201ENST00000156825 B4DLN1 442 aa21.12■□□□□ 0.97
MBD3-201ENST00000156825 ARL1P40616 181 aaPredicted RBP21.12■□□□□ 0.97
MBD3-201ENST00000156825 LMBR1Q8WVP7 490 aa21.12■□□□□ 0.97
MBD3-201ENST00000156825 KIF21AQ7Z4S6 1674 aa21.12■□□□□ 0.97
MBD3-201ENST00000156825 SCNN1DP51172 638 aa21.12■□□□□ 0.97
MBD3-201ENST00000156825 PPARAQ07869 468 aa21.12■□□□□ 0.97
MBD3-201ENST00000156825 ADGRL2O95490 1459 aa21.12■□□□□ 0.97
MBD3-201ENST00000156825 FNBP1Q96RU3 617 aa21.12■□□□□ 0.97
MBD3-201ENST00000156825 RSPH14Q9UHP6 348 aa21.12■□□□□ 0.97
MBD3-201ENST00000156825 KIAA0232Q92628 1395 aa21.12■□□□□ 0.97
MBD3-201ENST00000156825 CUTAO60888 179 aa21.12■□□□□ 0.97
MBD3-201ENST00000156825 PSMB7Q99436 277 aa21.12■□□□□ 0.97
MBD3-201ENST00000156825 CALCOCO1Q9P1Z2 691 aa21.12■□□□□ 0.97
MBD3-201ENST00000156825 METP08581 1390 aa21.12■□□□□ 0.97
MBD3-201ENST00000156825 CALRP27797 417 aaKnown RBP21.12■□□□□ 0.97
MBD3-201ENST00000156825 LMBRD1Q9NUN5 540 aa21.12■□□□□ 0.97
MBD3-201ENST00000156825 IQCGQ9H095 443 aaKnown RBP21.11■□□□□ 0.97
MBD3-201ENST00000156825 GREM2Q9H772 168 aa21.11■□□□□ 0.97
MBD3-201ENST00000156825 IBTKQ9P2D0 1353 aaPredicted RBP21.11■□□□□ 0.97
MBD3-201ENST00000156825 ADCY7P51828 1080 aa21.11■□□□□ 0.97
MBD3-201ENST00000156825 DOK7Q18PE1 504 aa21.11■□□□□ 0.97
MBD3-201ENST00000156825 TMEM63CQ9P1W3 806 aa21.11■□□□□ 0.97
MBD3-201ENST00000156825 BIN2Q9UBW5 565 aaPredicted RBP21.11■□□□□ 0.97
MBD3-201ENST00000156825 RASAL2Q9UJF2 1139 aa21.11■□□□□ 0.97
MBD3-201ENST00000156825 SYNRGQ9UMZ2 1314 aa21.11■□□□□ 0.97
MBD3-201ENST00000156825 EPB41P11171 864 aaKnown RBP21.11■□□□□ 0.97
MBD3-201ENST00000156825 TICAM2Q86XR7 235 aa21.11■□□□□ 0.97
MBD3-201ENST00000156825 ZNF654Q8IZM8 581 aa21.11■□□□□ 0.97
MBD3-201ENST00000156825 OTUD6BQ8N6M0 293 aa21.11■□□□□ 0.97
MBD3-201ENST00000156825 PDE6AP16499 860 aa21.11■□□□□ 0.97
MBD3-201ENST00000156825 SPECC1LQ69YQ0 1117 aa21.11■□□□□ 0.97
MBD3-201ENST00000156825 USP40Q9NVE5 1235 aa21.11■□□□□ 0.97
MBD3-201ENST00000156825 TLR7Q9NYK1 1049 aaKnown RBP21.11■□□□□ 0.97
MBD3-201ENST00000156825 GOLGA8HP0CJ92 632 aa21.1■□□□□ 0.97
MBD3-201ENST00000156825 UNC5CLQ8IV45 518 aa21.1■□□□□ 0.97
MBD3-201ENST00000156825 ZEB2O60315 1214 aa21.1■□□□□ 0.97
MBD3-201ENST00000156825 KIAA0825Q8IV33 1275 aa21.1■□□□□ 0.97
MBD3-201ENST00000156825 TPCN1Q9ULQ1 816 aa21.1■□□□□ 0.97
MBD3-201ENST00000156825 HSPD1P10809 573 aaKnown RBP21.1■□□□□ 0.97
MBD3-201ENST00000156825 ADORA1P30542 326 aa21.1■□□□□ 0.97
MBD3-201ENST00000156825 PRPHP41219 470 aa21.1■□□□□ 0.97
MBD3-201ENST00000156825 SELENOSQ9BQE4 189 aa21.1■□□□□ 0.97
MBD3-201ENST00000156825 ARHGEF35A5YM69 484 aa21.1■□□□□ 0.97
MBD3-201ENST00000156825 KRT9P35527 623 aa21.1■□□□□ 0.97
MBD3-201ENST00000156825 DSCC1Q9BVC3 393 aa21.1■□□□□ 0.97
MBD3-201ENST00000156825 PNOCQ13519 176 aa21.09■□□□□ 0.97
MBD3-201ENST00000156825 PPIP5K2O43314 1243 aa21.09■□□□□ 0.97
MBD3-201ENST00000156825 PAK1Q13153 545 aa21.09■□□□□ 0.97
MBD3-201ENST00000156825 CNNM4Q6P4Q7 775 aa21.09■□□□□ 0.97
MBD3-201ENST00000156825 IFNL3Q8IZI9 196 aa21.09■□□□□ 0.97
MBD3-201ENST00000156825 FGAP02671 866 aa21.09■□□□□ 0.97
MBD3-201ENST00000156825 KIFC2Q96AC6 838 aa21.09■□□□□ 0.97
MBD3-201ENST00000156825 CCDC114Q96M63 670 aa21.09■□□□□ 0.97
MBD3-201ENST00000156825 BLMP54132 1417 aaPredicted RBP21.09■□□□□ 0.97
MBD3-201ENST00000156825 U2AF2P26368 475 aaKnown RBP eCLIP21.09■□□□□ 0.97
MBD3-201ENST00000156825 PHKA1P46020 1223 aa21.09■□□□□ 0.97
MBD3-201ENST00000156825 TSNARE1Q96NA8 513 aa21.09■□□□□ 0.97
MBD3-201ENST00000156825 TMOD4Q9NZQ9 345 aa21.09■□□□□ 0.97
MBD3-201ENST00000156825 GTF3C6Q969F1 213 aa21.08■□□□□ 0.97
MBD3-201ENST00000156825 CEP83Q9Y592 693 aa21.08■□□□□ 0.97
MBD3-201ENST00000156825 POSTNQ15063 836 aa21.08■□□□□ 0.97
MBD3-201ENST00000156825 HAUS3Q68CZ6 603 aa21.08■□□□□ 0.97
MBD3-201ENST00000156825 CALCRLQ16602 461 aa21.08■□□□□ 0.96
MBD3-201ENST00000156825 RDH13Q8NBN7 331 aa21.08■□□□□ 0.96
MBD3-201ENST00000156825 SERTAD1Q9UHV2 236 aa21.08■□□□□ 0.96
MBD3-201ENST00000156825 FRMPD2Q68DX3 1309 aaPredicted RBP21.08■□□□□ 0.96
MBD3-201ENST00000156825 STAMBPO95630 424 aa21.08■□□□□ 0.96
MBD3-201ENST00000156825 ZBTB38Q8NAP3 1195 aaPredicted RBP21.08■□□□□ 0.96
MBD3-201ENST00000156825 VPS18Q9P253 973 aa21.08■□□□□ 0.96
MBD3-201ENST00000156825 CETN3O15182 167 aa21.07■□□□□ 0.96
MBD3-201ENST00000156825 EVCP57679 992 aa21.07■□□□□ 0.96
MBD3-201ENST00000156825 USPL1Q5W0Q7 1092 aa21.07■□□□□ 0.96
MBD3-201ENST00000156825 USP28Q96RU2 1077 aa21.07■□□□□ 0.96
MBD3-201ENST00000156825 PPP1R7Q15435 360 aa21.07■□□□□ 0.96
MBD3-201ENST00000156825 MYSM1Q5VVJ2 828 aa21.07■□□□□ 0.96
MBD3-201ENST00000156825 CCDC63Q8NA47 563 aa21.07■□□□□ 0.96
MBD3-201ENST00000156825 PLEKHF1Q96S99 279 aa21.07■□□□□ 0.96
MBD3-201ENST00000156825 MAGI2Q86UL8 1455 aa21.07■□□□□ 0.96
MBD3-201ENST00000156825 DLGAP5Q15398 846 aa21.07■□□□□ 0.96
MBD3-201ENST00000156825 KDRP35968 1356 aa21.07■□□□□ 0.96
MBD3-201ENST00000156825 ZNF75DP51815 510 aa21.07■□□□□ 0.96
MBD3-201ENST00000156825 REXO1Q8N1G1 1221 aaKnown RBP21.07■□□□□ 0.96
MBD3-201ENST00000156825 CAPN2P17655 700 aa21.06■□□□□ 0.96
MBD3-201ENST00000156825 LRRC47Q8N1G4 583 aaKnown RBP21.06■□□□□ 0.96
MBD3-201ENST00000156825 GIMAP7Q8NHV1 300 aa21.06■□□□□ 0.96
MBD3-201ENST00000156825 ZBTB1Q9Y2K1 713 aa21.06■□□□□ 0.96
MBD3-201ENST00000156825 SMCO2A6NFE2 343 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms