RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 CIAPIN1Q6FI81 312 aa12.36□□□□□ -0.43
CD4-201ENST00000011653 SLF2Q8IX21 1173 aa12.36□□□□□ -0.43
CD4-201ENST00000011653 NBPF3Q9H094 633 aa12.36□□□□□ -0.43
CD4-201ENST00000011653 NEDD4P46934 1319 aa12.36□□□□□ -0.43
CD4-201ENST00000011653 FAM196BA6NMK8 535 aa12.36□□□□□ -0.43
CD4-201ENST00000011653 RPS6KB1P23443 525 aa12.36□□□□□ -0.43
CD4-201ENST00000011653 MCM5P33992 734 aa12.36□□□□□ -0.43
CD4-201ENST00000011653 APOBRQ0VD83 1088 aa12.36□□□□□ -0.43
CD4-201ENST00000011653 KRT32Q14532 448 aa12.36□□□□□ -0.43
CD4-201ENST00000011653 CFAP100Q494V2 611 aa12.36□□□□□ -0.43
CD4-201ENST00000011653 FAM47AQ5JRC9 791 aa12.36□□□□□ -0.43
CD4-201ENST00000011653 CTR9Q6PD62 1173 aa12.36□□□□□ -0.43
CD4-201ENST00000011653 CCDC83Q8IWF9 413 aa12.36□□□□□ -0.43
CD4-201ENST00000011653 CCDC144CPQ8IYA2 1237 aa12.36□□□□□ -0.43
CD4-201ENST00000011653 ZSWIM6Q9HCJ5 1215 aa12.36□□□□□ -0.43
CD4-201ENST00000011653 ZKSCAN5Q9Y2L8 839 aa12.36□□□□□ -0.43
CD4-201ENST00000011653 PDS5AQ29RF7 1337 aaKnown RBP12.36□□□□□ -0.43
CD4-201ENST00000011653 FOSBP53539 338 aa12.35□□□□□ -0.43
CD4-201ENST00000011653 TERF1P54274 439 aa12.35□□□□□ -0.43
CD4-201ENST00000011653 CCT2P78371 535 aaKnown RBP12.35□□□□□ -0.43
CD4-201ENST00000011653 TACC3Q9Y6A5 838 aa12.35□□□□□ -0.43
CD4-201ENST00000011653 TCP10L2B9ZVM9 353 aa12.35□□□□□ -0.43
CD4-201ENST00000011653 PRC1O43663 620 aa12.35□□□□□ -0.43
CD4-201ENST00000011653 PLCD1P51178 756 aa12.35□□□□□ -0.43
CD4-201ENST00000011653 RSBN1LQ6PCB5 846 aaPredicted RBP12.35□□□□□ -0.43
CD4-201ENST00000011653 RNF214Q8ND24 703 aa12.35□□□□□ -0.43
CD4-201ENST00000011653 NCOA7Q8NI08 942 aa12.35□□□□□ -0.43
CD4-201ENST00000011653 PRMT6Q96LA8 375 aaPredicted RBP12.35□□□□□ -0.43
CD4-201ENST00000011653 RNF181Q9P0P0 153 aa12.35□□□□□ -0.43
CD4-201ENST00000011653 LRRC37AA6NMS7 1700 aa12.35□□□□□ -0.43
CD4-201ENST00000011653 EIF6P56537 245 aaKnown RBP12.35□□□□□ -0.43
CD4-201ENST00000011653 FOXD4L6Q3SYB3 417 aaPredicted RBP12.35□□□□□ -0.43
CD4-201ENST00000011653 CDC42EP5Q6NZY7 148 aa12.35□□□□□ -0.43
CD4-201ENST00000011653 FOXD4L3Q6VB84 417 aaPredicted RBP12.35□□□□□ -0.43
CD4-201ENST00000011653 BAZ2AQ9UIF9 1905 aaKnown RBP12.34□□□□□ -0.43
CD4-201ENST00000011653 GPR75-ASB3A0A0A6YYF3 556 aa12.34□□□□□ -0.43
CD4-201ENST00000011653 TBC1D10BQ4KMP7 808 aaPredicted RBP12.34□□□□□ -0.43
CD4-201ENST00000011653 NFXL1Q6ZNB6 911 aa12.34□□□□□ -0.43
CD4-201ENST00000011653 CYB5R4Q7L1T6 521 aa12.34□□□□□ -0.43
CD4-201ENST00000011653 DHX32Q7L7V1 743 aaKnown RBP12.34□□□□□ -0.43
CD4-201ENST00000011653 SAMD7Q7Z3H4 446 aa12.34□□□□□ -0.43
CD4-201ENST00000011653 ZFPM1Q8IX07 1006 aa12.34□□□□□ -0.43
CD4-201ENST00000011653 MYL10Q9BUA6 226 aa12.34□□□□□ -0.43
CD4-201ENST00000011653 DDX4Q9NQI0 724 aaKnown RBP12.34□□□□□ -0.43
CD4-201ENST00000011653 COL4A5P29400 1685 aa12.34□□□□□ -0.43
CD4-201ENST00000011653 MYH2Q9UKX2 1941 aa12.34□□□□□ -0.43
CD4-201ENST00000011653 RHBDL3P58872 404 aa12.34□□□□□ -0.43
CD4-201ENST00000011653 AKNAD1Q5T1N1 836 aa12.34□□□□□ -0.43
CD4-201ENST00000011653 APOBEC3HQ6NTF7 200 aaKnown RBP12.34□□□□□ -0.43
CD4-201ENST00000011653 AMOTL1Q8IY63 956 aa12.34□□□□□ -0.43
CD4-201ENST00000011653 MKNK2Q9HBH9 465 aa12.34□□□□□ -0.43
CD4-201ENST00000011653 PRDM10Q9NQV6 1147 aa12.34□□□□□ -0.43
CD4-201ENST00000011653 TPCN1Q9ULQ1 816 aa12.34□□□□□ -0.43
CD4-201ENST00000011653 EGFRP00533 1210 aa12.33□□□□□ -0.44
CD4-201ENST00000011653 DLGAP5Q15398 846 aa12.33□□□□□ -0.44
CD4-201ENST00000011653 CSPP1Q1MSJ5 1256 aa12.33□□□□□ -0.44
CD4-201ENST00000011653 SENP2Q9HC62 589 aa12.33□□□□□ -0.44
CD4-201ENST00000011653 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.33□□□□□ -0.44
CD4-201ENST00000011653 NCOA5Q9HCD5 579 aaKnown RBP12.33□□□□□ -0.44
CD4-201ENST00000011653 ZSWIM5Q9P217 1185 aa12.33□□□□□ -0.44
CD4-201ENST00000011653 LIMCH1Q9UPQ0 1083 aa12.33□□□□□ -0.44
CD4-201ENST00000011653 IFIT3O14879 490 aaKnown RBP12.33□□□□□ -0.44
CD4-201ENST00000011653 NMT2O60551 498 aa12.33□□□□□ -0.44
CD4-201ENST00000011653 ME3Q16798 604 aa12.33□□□□□ -0.44
CD4-201ENST00000011653 USP48Q86UV5 1035 aa12.33□□□□□ -0.44
CD4-201ENST00000011653 CCDC82Q8N4S0 544 aa12.33□□□□□ -0.44
CD4-201ENST00000011653 TTC14Q96N46 770 aa12.33□□□□□ -0.44
CD4-201ENST00000011653 GDPD2Q9HCC8 539 aa12.33□□□□□ -0.44
CD4-201ENST00000011653 ATP8A2Q9NTI2 1148 aa12.33□□□□□ -0.44
CD4-201ENST00000011653 HDAC9Q9UKV0 1011 aa12.33□□□□□ -0.44
CD4-201ENST00000011653 FLT1P17948 1338 aa12.32□□□□□ -0.44
CD4-201ENST00000011653 LTBP1Q14766 1721 aa12.32□□□□□ -0.44
CD4-201ENST00000011653 RAD21O60216 631 aa12.32□□□□□ -0.44
CD4-201ENST00000011653 PTMAP06454 111 aaKnown RBP12.32□□□□□ -0.44
CD4-201ENST00000011653 GMPSP49915 693 aaPredicted RBP12.32□□□□□ -0.44
CD4-201ENST00000011653 NBPF9Q3BBW0 867 aa12.32□□□□□ -0.44
CD4-201ENST00000011653 GRIPAP1Q4V328 841 aa12.32□□□□□ -0.44
CD4-201ENST00000011653 SECISBP2LQ93073 1101 aaKnown RBP12.32□□□□□ -0.44
CD4-201ENST00000011653 ARID3AQ99856 593 aa12.32□□□□□ -0.44
CD4-201ENST00000011653 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.32□□□□□ -0.44
CD4-201ENST00000011653 SNED1Q8TER0 1413 aa12.32□□□□□ -0.44
CD4-201ENST00000011653 ZNF541Q9H0D2 1346 aa12.32□□□□□ -0.44
CD4-201ENST00000011653 GADD45BO75293 160 aaPredicted RBP12.32□□□□□ -0.44
CD4-201ENST00000011653 TOB2Q14106 344 aaPredicted RBP12.32□□□□□ -0.44
CD4-201ENST00000011653 TMEM87AQ8NBN3 555 aa12.32□□□□□ -0.44
CD4-201ENST00000011653 DDX11Q96FC9 970 aa12.32□□□□□ -0.44
CD4-201ENST00000011653 R3HCC1Q9Y3T6 440 aaKnown RBP12.32□□□□□ -0.44
CD4-201ENST00000011653 RPAP1Q9BWH6 1393 aaPredicted RBP12.31□□□□□ -0.44
CD4-201ENST00000011653 TSPY2A6NKD2 308 aa12.31□□□□□ -0.44
CD4-201ENST00000011653 DDNO94850 711 aaPredicted RBP12.31□□□□□ -0.44
CD4-201ENST00000011653 PLCG2P16885 1265 aa12.31□□□□□ -0.44
CD4-201ENST00000011653 TMEM67Q5HYA8 995 aa12.31□□□□□ -0.44
CD4-201ENST00000011653 FAM184AQ8NB25 1140 aa12.31□□□□□ -0.44
CD4-201ENST00000011653 NUP133Q8WUM0 1156 aa12.31□□□□□ -0.44
CD4-201ENST00000011653 KCNB2Q92953 911 aa12.31□□□□□ -0.44
CD4-201ENST00000011653 TM6SF1Q9BZW5 370 aa12.31□□□□□ -0.44
CD4-201ENST00000011653 WDHD1O75717 1129 aaPredicted RBP12.31□□□□□ -0.44
CD4-201ENST00000011653 VIL1P09327 827 aaKnown RBP12.31□□□□□ -0.44
CD4-201ENST00000011653 ANTXR2P58335 489 aa12.31□□□□□ -0.44
CD4-201ENST00000011653 PPP4CP60510 307 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms