RNA–Protein interactions for RNA: ENST00000009180.8

CD9-201, Transcript of CD9 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD9, Length 1,169 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-201ENST00000009180 IFNL3Q8IZI9 196 aa12.04□□□□□ -0.48
CD9-201ENST00000009180 STK11IPQ8N1F8 1099 aa12.04□□□□□ -0.48
CD9-201ENST00000009180 DYNLL2Q96FJ2 89 aa12.04□□□□□ -0.48
CD9-201ENST00000009180 DNAJC18Q9H819 358 aa12.04□□□□□ -0.48
CD9-201ENST00000009180 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.04□□□□□ -0.48
CD9-201ENST00000009180 MYH1P12882 1939 aa12.03□□□□□ -0.48
CD9-201ENST00000009180 MINDY4BA8MYZ0 360 aa12.03□□□□□ -0.48
CD9-201ENST00000009180 HLA-DOAP06340 250 aa12.03□□□□□ -0.48
CD9-201ENST00000009180 NF2P35240 595 aa12.03□□□□□ -0.48
CD9-201ENST00000009180 MFAP1P55081 439 aaKnown RBP12.03□□□□□ -0.48
CD9-201ENST00000009180 HTRA3P83110 453 aa12.03□□□□□ -0.48
CD9-201ENST00000009180 SUPT20HL1Q3ZLR7 823 aa12.03□□□□□ -0.48
CD9-201ENST00000009180 CASC1Q6TDU7 716 aa12.03□□□□□ -0.48
CD9-201ENST00000009180 SLC44A5Q8NCS7 719 aa12.03□□□□□ -0.48
CD9-201ENST00000009180 DDRGK1Q96HY6 314 aa12.03□□□□□ -0.48
CD9-201ENST00000009180 NAPBQ9H115 298 aa12.03□□□□□ -0.48
CD9-201ENST00000009180 DHX36Q9H2U1 1008 aaKnown RBP12.03□□□□□ -0.48
CD9-201ENST00000009180 GBA2Q9HCG7 927 aaPredicted RBP12.03□□□□□ -0.48
CD9-201ENST00000009180 ANGEL1Q9UNK9 670 aaKnown RBP12.03□□□□□ -0.48
CD9-201ENST00000009180 LAMB1P07942 1786 aa12.02□□□□□ -0.48
CD9-201ENST00000009180 PAPPA2Q9BXP8 1791 aa12.02□□□□□ -0.48
CD9-201ENST00000009180 UBE2Q2LH0YL09 131 aa12.02□□□□□ -0.49
CD9-201ENST00000009180 USP2O75604 605 aaPredicted RBP12.02□□□□□ -0.49
CD9-201ENST00000009180 FGAP02671 866 aa12.02□□□□□ -0.49
CD9-201ENST00000009180 C1QTNF8P60827 252 aa12.02□□□□□ -0.49
CD9-201ENST00000009180 HAND2P61296 217 aa12.02□□□□□ -0.49
CD9-201ENST00000009180 RRP1BQ14684 758 aaKnown RBP12.02□□□□□ -0.49
CD9-201ENST00000009180 SHROOM1Q2M3G4 852 aaPredicted RBP12.02□□□□□ -0.49
CD9-201ENST00000009180 C12orf60Q5U649 245 aa12.02□□□□□ -0.49
CD9-201ENST00000009180 GIMAP6Q6P9H5 292 aa12.02□□□□□ -0.49
CD9-201ENST00000009180 CRACR2BQ8N4Y2 399 aaPredicted RBP12.02□□□□□ -0.49
CD9-201ENST00000009180 NACAP1Q9BZK3 213 aa12.02□□□□□ -0.49
CD9-201ENST00000009180 LSG1Q9H089 658 aaKnown RBP12.02□□□□□ -0.49
CD9-201ENST00000009180 ANO2Q9NQ90 1003 aa12.02□□□□□ -0.49
CD9-201ENST00000009180 FRMD4AQ9P2Q2 1039 aaPredicted RBP12.02□□□□□ -0.49
CD9-201ENST00000009180 PI4KBQ9UBF8 816 aa12.02□□□□□ -0.49
CD9-201ENST00000009180 ARPP21Q9UBL0 812 aaPredicted RBP12.02□□□□□ -0.49
CD9-201ENST00000009180 TRPM7Q96QT4 1865 aa12.02□□□□□ -0.49
CD9-201ENST00000009180 OTOFQ9HC10 1997 aa12.01□□□□□ -0.49
CD9-201ENST00000009180 INPP5BP32019 993 aa12.01□□□□□ -0.49
CD9-201ENST00000009180 APLP1P51693 650 aa12.01□□□□□ -0.49
CD9-201ENST00000009180 CTDSPL2Q05D32 466 aa12.01□□□□□ -0.49
CD9-201ENST00000009180 PPARAQ07869 468 aa12.01□□□□□ -0.49
CD9-201ENST00000009180 ALX1Q15699 326 aa12.01□□□□□ -0.49
CD9-201ENST00000009180 SBK1Q52WX2 424 aa12.01□□□□□ -0.49
CD9-201ENST00000009180 TTC6Q86TZ1 520 aa12.01□□□□□ -0.49
CD9-201ENST00000009180 AMOTL1Q8IY63 956 aa12.01□□□□□ -0.49
CD9-201ENST00000009180 C2orf69Q8N8R5 385 aa12.01□□□□□ -0.49
CD9-201ENST00000009180 CLMNQ96JQ2 1002 aa12.01□□□□□ -0.49
CD9-201ENST00000009180 WRNIP1Q96S55 665 aa12.01□□□□□ -0.49
CD9-201ENST00000009180 DSCC1Q9BVC3 393 aa12.01□□□□□ -0.49
CD9-201ENST00000009180 ZNF341Q9BYN7 854 aa12.01□□□□□ -0.49
CD9-201ENST00000009180 NBPF3Q9H094 633 aa12.01□□□□□ -0.49
CD9-201ENST00000009180 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.01□□□□□ -0.49
CD9-201ENST00000009180 INCENPQ9NQS7 918 aa12.01□□□□□ -0.49
CD9-201ENST00000009180 SERPINB13Q9UIV8 391 aa12.01□□□□□ -0.49
CD9-201ENST00000009180 TACC3Q9Y6A5 838 aa12.01□□□□□ -0.49
CD9-201ENST00000009180 CEP350Q5VT06 3117 aa12.01□□□□□ -0.49
CD9-201ENST00000009180 TMEM88BA6NKF7 163 aa12□□□□□ -0.49
CD9-201ENST00000009180 PHF20L1A8MW92 1017 aa12□□□□□ -0.49
CD9-201ENST00000009180 PPP1R12BO60237 982 aaPredicted RBP12□□□□□ -0.49
CD9-201ENST00000009180 SHMT1P34896 483 aa12□□□□□ -0.49
CD9-201ENST00000009180 JAG1P78504 1218 aa12□□□□□ -0.49
CD9-201ENST00000009180 MAP3K10Q02779 954 aa12□□□□□ -0.49
CD9-201ENST00000009180 GABPAQ06546 454 aa12□□□□□ -0.49
CD9-201ENST00000009180 DCAF15Q66K64 600 aa12□□□□□ -0.49
CD9-201ENST00000009180 METTL16Q86W50 562 aaKnown RBP12□□□□□ -0.49
CD9-201ENST00000009180 TBC1D10CQ8IV04 446 aa12□□□□□ -0.49
CD9-201ENST00000009180 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12□□□□□ -0.49
CD9-201ENST00000009180 ZKSCAN4Q969J2 545 aaPredicted RBP12□□□□□ -0.49
CD9-201ENST00000009180 KLRG1Q96E93 195 aa12□□□□□ -0.49
CD9-201ENST00000009180 HOOK2Q96ED9 719 aa12□□□□□ -0.49
CD9-201ENST00000009180 TRIM34Q9BYJ4 488 aa12□□□□□ -0.49
CD9-201ENST00000009180 EHD4Q9H223 541 aa12□□□□□ -0.49
CD9-201ENST00000009180 HERC5Q9UII4 1024 aaKnown RBP12□□□□□ -0.49
CD9-201ENST00000009180 ABT1Q9ULW3 272 aaKnown RBP12□□□□□ -0.49
CD9-201ENST00000009180 RBM8AQ9Y5S9 174 aaKnown RBP12□□□□□ -0.49
CD9-201ENST00000009180 TAF6LQ9Y6J9 622 aa12□□□□□ -0.49
CD9-201ENST00000009180 ZMYM6O95789 1325 aa12□□□□□ -0.49
CD9-201ENST00000009180 ROBO3Q96MS0 1386 aa12□□□□□ -0.49
CD9-201ENST00000009180 TBC1D12O60347 775 aa11.99□□□□□ -0.49
CD9-201ENST00000009180 PRDM1O75626 825 aa11.99□□□□□ -0.49
CD9-201ENST00000009180 GDF11O95390 407 aa11.99□□□□□ -0.49
CD9-201ENST00000009180 IREB2P48200 963 aaKnown RBP11.99□□□□□ -0.49
CD9-201ENST00000009180 CDK8P49336 464 aa11.99□□□□□ -0.49
CD9-201ENST00000009180 HUNKP57058 714 aa11.99□□□□□ -0.49
CD9-201ENST00000009180 VGLL4Q14135 290 aa11.99□□□□□ -0.49
CD9-201ENST00000009180 C8orf34Q49A92 452 aa11.99□□□□□ -0.49
CD9-201ENST00000009180 PPP1R3FQ6ZSY5 799 aaPredicted RBP11.99□□□□□ -0.49
CD9-201ENST00000009180 KIAA1211Q6ZU35 1233 aa11.99□□□□□ -0.49
CD9-201ENST00000009180 C16orf86Q6ZW13 317 aa11.99□□□□□ -0.49
CD9-201ENST00000009180 ARMC9Q7Z3E5 817 aa11.99□□□□□ -0.49
CD9-201ENST00000009180 CCDC84Q86UT8 332 aaPredicted RBP11.99□□□□□ -0.49
CD9-201ENST00000009180 FOXP4Q8IVH2 680 aaPredicted RBP11.99□□□□□ -0.49
CD9-201ENST00000009180 ZNF112Q9UJU3 913 aa11.99□□□□□ -0.49
CD9-201ENST00000009180 TLL2Q9Y6L7 1015 aa11.99□□□□□ -0.49
CD9-201ENST00000009180 LAMA4Q16363 1823 aa11.98□□□□□ -0.49
CD9-201ENST00000009180 FKBP1BP68106 108 aa11.98□□□□□ -0.49
CD9-201ENST00000009180 MAP3K11Q16584 847 aa11.98□□□□□ -0.49
CD9-201ENST00000009180 LDLRAD1Q5T700 205 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms