RNA–Protein interactions for RNA: ENSMUST00000211788.1

Ptpre-208, Transcript of Receptor-type tyrosine-protein phosphatase epsilon, mousemouse

TSL 1 (best) BASIC

Gene Ptpre, Length 2,331 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptpre-208ENSMUST00000211788 Gpr108Q91WD0 569 aa12.05□□□□□ -0.48
Ptpre-208ENSMUST00000211788 NagaQ9QWR8 415 aa12.05□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Letm1Q9Z2I0 738 aa12.05□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Suclg2Q9Z2I8 433 aa12.05□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Naaladl2A0A0N4SUJ3 795 aa12.04□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Pramel3A2AHA7 463 aa12.04□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Ankrd63A2ARS0 390 aa12.04□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Gm7903A2AWL1 463 aa12.04□□□□□ -0.48
Ptpre-208ENSMUST00000211788 AV320801A2AWL3 467 aa12.04□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Ubap1lG3UW59 384 aa12.04□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Gm15023L7MUB4 467 aa12.04□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Ccng2O08918 344 aa12.04□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Hmx1O70218 332 aa12.04□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Cd3dP04235 173 aa12.04□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Dnm1P39053 867 aa12.04□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Rhbdl3P58873 404 aa12.04□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Cplx1P63040 134 aa12.04□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Ppp1r21Q3TDD9 780 aa12.04□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Spout1Q3UHX9 385 aaKnown RBP12.04□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Ppm1eQ80TL0 749 aa12.04□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Cdca8Q8BHX3 289 aa12.04□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Ranbp6Q8BIV3 1105 aa12.04□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Ttc12Q8BW49 704 aa12.04□□□□□ -0.48
Ptpre-208ENSMUST00000211788 E2f4Q8R0K9 410 aa12.04□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Zranb2Q9R020 330 aaKnown RBP12.04□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Ltbp1Q8CG19 1712 aa12.04□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Abl1P00520 1123 aa12.04□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Atp6v1aP50516 617 aaKnown RBP12.04□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Lrit1Q8K099 624 aa12.04□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Ubxn4Q8VCH8 506 aa12.04□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Hps3Q91VB4 1002 aa12.04□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Stag1Q9D3E6 1258 aa12.04□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Aox4Q3TYQ9 1336 aa12.04□□□□□ -0.48
Ptpre-208ENSMUST00000211788 C4bP01029 1738 aa12.03□□□□□ -0.48
Ptpre-208ENSMUST00000211788 FAM186AQ9D9R9 1790 aa12.03□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Nup98Q6PFD9 1816 aaKnown RBP12.03□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Pde11aP0C1Q2 933 aa12.03□□□□□ -0.48
Ptpre-208ENSMUST00000211788 CebpaP53566 359 aa12.03□□□□□ -0.48
Ptpre-208ENSMUST00000211788 CebpzP53569 1052 aaKnown RBP12.03□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Dynll1P63168 89 aa12.03□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Sptlc2P97363 560 aaKnown RBP12.03□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Krt40Q6IFX3 439 aa12.03□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Hps6Q8BLY7 805 aa12.03□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Ccz1Q8C1Y8 480 aa12.03□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Sde2Q8K1J5 448 aaKnown RBP12.03□□□□□ -0.48
Ptpre-208ENSMUST00000211788 MypopQ8R4U1 393 aa12.03□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Sirt2Q8VDQ8 389 aa12.03□□□□□ -0.48
Ptpre-208ENSMUST00000211788 RtcbQ99LF4 505 aaKnown RBP12.03□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Dusp10Q9ESS0 483 aa12.03□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Gm7347D3YYI9 267 aa12.03□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Speer4aF8VPX6 267 aa12.03□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Tuft1O08970 390 aa12.03□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Rrp1P56183 494 aaKnown RBP12.03□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Rps8P62242 208 aaKnown RBP12.03□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Gm28047Q3US59 414 aa12.03□□□□□ -0.48
Ptpre-208ENSMUST00000211788 SfswapQ3USH5 945 aaKnown RBP12.03□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Otop3Q80UF9 577 aa12.03□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Cfap69Q8BH53 942 aa12.03□□□□□ -0.48
Ptpre-208ENSMUST00000211788 WtapQ9ER69 396 aa12.03□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Duox1A2AQ92 1551 aa12.02□□□□□ -0.48
Ptpre-208ENSMUST00000211788 Dhx8A2A4P0 1244 aaKnown RBP12.02□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Pet2A2AHY8 747 aa12.02□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Ces1hD3Z298 562 aa12.02□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Ccdc121E9Q6D3 323 aa12.02□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Sema6bO54951 886 aa12.02□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Clec11aO88200 328 aa12.02□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Q3TYL0 343 aa12.02□□□□□ -0.49
Ptpre-208ENSMUST00000211788 HlfQ8BW74 295 aa12.02□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Taok3Q8BYC6 898 aa12.02□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Calcoco1Q8CGU1 691 aa12.02□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Afg3l2Q8JZQ2 802 aaKnown RBP12.02□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Brms1Q99N20 246 aa12.02□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Cxcl11Q9JHH5 100 aa12.02□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Myh15E9Q264 1925 aa12.02□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Myh4Q5SX39 1939 aa12.02□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Bnip3O55003 187 aa12.02□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Surf1P09925 306 aa12.02□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Foxp1P58462 705 aa12.02□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Zrsr2Q62377 462 aaKnown RBP12.02□□□□□ -0.49
Ptpre-208ENSMUST00000211788 HelbQ6NVF4 1074 aa12.02□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Prkag3Q8BGM7 489 aa12.02□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Rnf41Q8BH75 317 aa12.02□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Yeats4Q9CR11 227 aaKnown RBP12.02□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Telo2Q9DC40 840 aaKnown RBP12.02□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Adarb2Q9JI20 745 aa12.02□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Map2k1P31938 393 aa12.01□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Fam83bQ0VBM2 1012 aa12.01□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Spata5Q3UMC0 893 aaKnown RBP12.01□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Arid3aQ62431 601 aa12.01□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Klra3Q64329 266 aa12.01□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Trak2Q6P9N8 913 aa12.01□□□□□ -0.49
Ptpre-208ENSMUST00000211788 VmacQ8BP01 174 aa12.01□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Paf1Q8K2T8 535 aa12.01□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Cnpy3Q9DAU1 276 aa12.01□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Arhgap33Q80YF9 1305 aa12.01□□□□□ -0.49
Ptpre-208ENSMUST00000211788 A0A1W2P7S8 802 aa12□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Stx1aO35526 288 aa12□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Il15P48346 162 aa12□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Cdc5lQ6A068 802 aaKnown RBP12□□□□□ -0.49
Ptpre-208ENSMUST00000211788 Olfr118Q7TRJ6 321 aa12□□□□□ -0.49
Retrieved 100 of 22,080 RNA–protein pairs in 20.2 ms