RNA–Protein interactions for RNA: ENSMUST00000200963.3

Scn8a-208, Transcript of Sodium channel protein type 8 subunit alpha, mousemouse

TSL 5 BASIC

Gene Scn8a, Length 5,814 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8a-208ENSMUST00000200963 Nup62clA2AG10 272 aa13.09□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Trove2O08848 538 aa13.09□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Herc4Q6PAV2 1057 aa13.09□□□□□ -0.31
Scn8a-208ENSMUST00000200963 IqceQ6PCQ0 778 aa13.09□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Ccdc28aQ8CEI3 192 aa13.09□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Atf7ipQ7TT18 1306 aa13.09□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Actr5Q80US4 605 aaKnown RBP13.09□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Ttc14Q9CSP9 761 aa13.09□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Otud7bB2RUR8 840 aa13.09□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Gm12185Q5NCB2 835 aa13.09□□□□□ -0.31
Scn8a-208ENSMUST00000200963 CltaO08585 235 aa13.08□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Rrp1P56183 494 aaKnown RBP13.08□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Ccdc114Q3UX62 658 aa13.08□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Tor4aQ8BH02 426 aa13.08□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Zfp202Q8C879 641 aa13.08□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Xpo5Q924C1 1204 aaKnown RBP13.08□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Sf3a3Q9D554 501 aaKnown RBP13.08□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Appbp2Q9DAX9 585 aa13.08□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Aox4Q3TYQ9 1336 aa13.08□□□□□ -0.31
Scn8a-208ENSMUST00000200963 Nub1P54729 614 aa13.08□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Stim2P83093 746 aa13.08□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Sox13Q04891 613 aa13.08□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Ppp1r12cQ3UMT1 782 aa13.08□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Kif2bQ8C0N1 668 aa13.08□□□□□ -0.32
Scn8a-208ENSMUST00000200963 HgsQ99LI8 775 aa13.08□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Cpb1B2RS76 415 aa13.08□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Ice2Q3UZ18 988 aaKnown RBP13.08□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Anks6Q6GQX6 883 aa13.08□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Cabp7Q91ZM8 215 aa13.08□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Mtss1lQ6P9S0 715 aa13.08□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Rps6ka2Q9WUT3 733 aa13.08□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Nsd3Q6P2L6 1439 aa13.08□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Iqsec3Q3TES0 1195 aa13.08□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Hirip3Q8BLH7 601 aa13.08□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Kcnj14Q8JZN3 434 aa13.08□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Galnt15Q9D2N8 638 aa13.08□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Taf4bG5E8Z2 855 aa13.07□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Miga2Q8BK03 593 aa13.07□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Tfcp2Q9ERA0 502 aa13.07□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Dnajc25A2ALW5 357 aa13.07□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Prkg1P0C605 671 aa13.07□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Eif2aQ8BJW6 581 aaKnown RBP13.07□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Pagr1bF6V0H0 108 aa13.07□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Tom1l2Q5SRX1 507 aa13.07□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Ivns1abpQ920Q8 642 aa13.07□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Pagr1aQ99L02 253 aa13.07□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Cacna2d3Q9Z1L5 1091 aa13.07□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Asxl2Q8BZ32 1370 aa13.07□□□□□ -0.32
Scn8a-208ENSMUST00000200963 DgkiD3YWQ0 1071 aa13.07□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Wdr93Q402B2 695 aa13.07□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Pde6cQ91ZQ1 861 aa13.07□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Pdzd4Q9QY39 772 aa13.07□□□□□ -0.32
Scn8a-208ENSMUST00000200963 ByslO54825 436 aaKnown RBP13.07□□□□□ -0.32
Scn8a-208ENSMUST00000200963 CrklP47941 303 aa13.07□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Cct6aP80317 531 aaKnown RBP13.07□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Gm5168Q4KL04 211 aa13.07□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Elf1Q60775 612 aa13.07□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Cyp24a1Q64441 514 aa13.07□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Zfp251Q6PCX8 632 aa13.07□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Gpcpd1Q8C0L9 675 aa13.07□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Pih1h3bQ8C6P5 218 aa13.07□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Krt18P05784 423 aa13.06□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Ftl1P29391 183 aa13.06□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Znf76Q8BMU0 568 aa13.06□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Col4a3bpQ9EQG9 624 aa13.06□□□□□ -0.32
Scn8a-208ENSMUST00000200963 MesdQ9ERE7 224 aa13.06□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Rps6ka1P18653 724 aa13.06□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Cdr2P97817 455 aa13.06□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Birc2Q62210 612 aa13.06□□□□□ -0.32
Scn8a-208ENSMUST00000200963 PaoxQ8C0L6 504 aa13.06□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Pak2Q8CIN4 524 aa13.06□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Krt71Q9R0H5 524 aa13.06□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Fyb2A2A995 729 aa13.06□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Btn2a2A4QPC6 514 aa13.06□□□□□ -0.32
Scn8a-208ENSMUST00000200963 NppbP40753 121 aa13.06□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Aifm3Q3TY86 605 aa13.06□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Pabpn1lQ5XFR0 273 aa13.06□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Rimbp2Q80U40 1072 aa13.06□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Lrrd1Q8C0R9 853 aa13.06□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Plcb1Q9Z1B3 1216 aa13.06□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Aox1O54754 1333 aa13.06□□□□□ -0.32
Scn8a-208ENSMUST00000200963 IkbkgO88522 412 aa13.06□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Cep63Q3UPP8 700 aa13.06□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Pja2Q80U04 707 aa13.06□□□□□ -0.32
Scn8a-208ENSMUST00000200963 EhhadhQ9DBM2 718 aa13.06□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Thoc2B1AZI6 1594 aaKnown RBP13.06□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Ankrd50F7BE84 1390 aa13.05□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Stk36Q69ZM6 1316 aa13.05□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Ccdc152E9PX14 254 aa13.05□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Ncf2O70145 525 aa13.05□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Ddx49Q4FZF3 480 aaKnown RBP13.05□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Cnnm4Q69ZF7 771 aa13.05□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Dhx38Q80X98 1228 aa13.05□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Dph5Q9CWQ0 281 aa13.05□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Dnm2P39054 870 aaKnown RBP13.05□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Zfp781Q0P5U5 243 aa13.05□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Tbc1d31Q6NXY1 996 aa13.05□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Pik3caP42337 1068 aa13.05□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Psmc2P46471 433 aa13.05□□□□□ -0.32
Scn8a-208ENSMUST00000200963 Znf667Q2TL60 609 aa13.05□□□□□ -0.32
Retrieved 100 of 22,080 RNA–protein pairs in 15.1 ms