RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Gprasp2Q8BUY8 826 aa20.26■□□□□ 0.83
Trim71-201ENSMUST00000111816 Abhd8Q8R0P8 439 aa20.26■□□□□ 0.83
Trim71-201ENSMUST00000111816 Prc1Q99K43 603 aaKnown RBP20.26■□□□□ 0.83
Trim71-201ENSMUST00000111816 Gucy2eP52785 1108 aa20.26■□□□□ 0.83
Trim71-201ENSMUST00000111816 Ncf1Q09014 390 aa20.26■□□□□ 0.83
Trim71-201ENSMUST00000111816 Slc10a4Q3UEZ8 437 aa20.26■□□□□ 0.83
Trim71-201ENSMUST00000111816 Psmd2Q8VDM4 908 aa20.26■□□□□ 0.83
Trim71-201ENSMUST00000111816 Abtb1Q99LJ2 478 aa20.26■□□□□ 0.83
Trim71-201ENSMUST00000111816 Fen1P39749 378 aa20.26■□□□□ 0.83
Trim71-201ENSMUST00000111816 Klhl31Q8BWA5 634 aa20.26■□□□□ 0.83
Trim71-201ENSMUST00000111816 Tmx1Q8VBT0 278 aa20.26■□□□□ 0.83
Trim71-201ENSMUST00000111816 Plekho1Q9JIY0 408 aa20.26■□□□□ 0.83
Trim71-201ENSMUST00000111816 Mcm7Q61881 719 aaKnown RBP20.26■□□□□ 0.83
Trim71-201ENSMUST00000111816 Psmb7P70195 277 aa20.26■□□□□ 0.83
Trim71-201ENSMUST00000111816 Dennd2cQ6P9P8 914 aa20.26■□□□□ 0.83
Trim71-201ENSMUST00000111816 Q9D9H8 365 aa20.26■□□□□ 0.83
Trim71-201ENSMUST00000111816 NostrinQ6WKZ7 506 aa20.26■□□□□ 0.83
Trim71-201ENSMUST00000111816 Jmjd4Q8BFT6 427 aa20.26■□□□□ 0.83
Trim71-201ENSMUST00000111816 RarsQ9D0I9 660 aaKnown RBP20.26■□□□□ 0.83
Trim71-201ENSMUST00000111816 Gm14685Q52KH6 695 aa20.25■□□□□ 0.83
Trim71-201ENSMUST00000111816 Srrm1Q52KI8 946 aaKnown RBP20.25■□□□□ 0.83
Trim71-201ENSMUST00000111816 Gnat3Q3V3I2 354 aa20.25■□□□□ 0.83
Trim71-201ENSMUST00000111816 Birc2Q62210 612 aa20.25■□□□□ 0.83
Trim71-201ENSMUST00000111816 Speer4eK7N6S8 255 aa20.25■□□□□ 0.83
Trim71-201ENSMUST00000111816 Tspyl1O88852 379 aa20.25■□□□□ 0.83
Trim71-201ENSMUST00000111816 HomezQ80W88 542 aa20.25■□□□□ 0.83
Trim71-201ENSMUST00000111816 Tmco4Q91WU4 631 aa20.25■□□□□ 0.83
Trim71-201ENSMUST00000111816 Ppp6r3Q922D4 844 aa20.25■□□□□ 0.83
Trim71-201ENSMUST00000111816 Slc13a1Q9JHI4 594 aa20.25■□□□□ 0.83
Trim71-201ENSMUST00000111816 Mrps27Q8BK72 415 aaKnown RBP20.25■□□□□ 0.83
Trim71-201ENSMUST00000111816 Tmx3Q8BXZ1 456 aa20.25■□□□□ 0.83
Trim71-201ENSMUST00000111816 Mylk2Q8VCR8 613 aa20.25■□□□□ 0.83
Trim71-201ENSMUST00000111816 Kdm5dQ62240 1548 aa20.25■□□□□ 0.83
Trim71-201ENSMUST00000111816 Gnat2P50149 354 aa20.25■□□□□ 0.83
Trim71-201ENSMUST00000111816 TmpoQ61033 693 aaKnown RBP20.25■□□□□ 0.83
Trim71-201ENSMUST00000111816 Morc2aQ69ZX6 1030 aa20.25■□□□□ 0.83
Trim71-201ENSMUST00000111816 Ddx42Q810A7 929 aaKnown RBP20.25■□□□□ 0.83
Trim71-201ENSMUST00000111816 Clec4gQ8BNX1 294 aa20.25■□□□□ 0.83
Trim71-201ENSMUST00000111816 PapolbQ9WVP6 641 aa20.25■□□□□ 0.83
Trim71-201ENSMUST00000111816 Hdac6Q9Z2V5 1149 aa20.25■□□□□ 0.83
Trim71-201ENSMUST00000111816 Zcchc8Q9CYA6 709 aaKnown RBP20.25■□□□□ 0.83
Trim71-201ENSMUST00000111816 Nlrp14Q6B966 993 aa20.25■□□□□ 0.83
Trim71-201ENSMUST00000111816 Asic2Q925H0 512 aa20.25■□□□□ 0.83
Trim71-201ENSMUST00000111816 Txndc9Q9CQ79 226 aa20.25■□□□□ 0.83
Trim71-201ENSMUST00000111816 Myh9Q8VDD5 1960 aaKnown RBP20.24■□□□□ 0.83
Trim71-201ENSMUST00000111816 Itih3Q61704 889 aa20.24■□□□□ 0.83
Trim71-201ENSMUST00000111816 Arhgap10Q6Y5D8 786 aa20.24■□□□□ 0.83
Trim71-201ENSMUST00000111816 Rtn1Q8K0T0 780 aa20.24■□□□□ 0.83
Trim71-201ENSMUST00000111816 Smarca5Q91ZW3 1051 aaKnown RBP20.24■□□□□ 0.83
Trim71-201ENSMUST00000111816 Ptgs1P22437 602 aa20.24■□□□□ 0.83
Trim71-201ENSMUST00000111816 Ccdc138Q0VF22 680 aa20.24■□□□□ 0.83
Trim71-201ENSMUST00000111816 Eps15l1Q60902 907 aaKnown RBP20.24■□□□□ 0.83
Trim71-201ENSMUST00000111816 Usp33Q8R5K2 909 aa20.24■□□□□ 0.83
Trim71-201ENSMUST00000111816 Cnot6lQ8VEG6 555 aa20.24■□□□□ 0.83
Trim71-201ENSMUST00000111816 Rgs3Q9DC04 966 aa20.24■□□□□ 0.83
Trim71-201ENSMUST00000111816 Acot9Q9R0X4 439 aaKnown RBP20.24■□□□□ 0.83
Trim71-201ENSMUST00000111816 Tbc1d4Q8BYJ6 1307 aa20.24■□□□□ 0.83
Trim71-201ENSMUST00000111816 Arhgap42B2RQE8 841 aa20.24■□□□□ 0.83
Trim71-201ENSMUST00000111816 Ppp2r5cQ60996 524 aa20.24■□□□□ 0.83
Trim71-201ENSMUST00000111816 GsnP13020 780 aa20.24■□□□□ 0.83
Trim71-201ENSMUST00000111816 Ift122Q6NWV3 1182 aa20.24■□□□□ 0.83
Trim71-201ENSMUST00000111816 Uba5Q8VE47 403 aa20.24■□□□□ 0.83
Trim71-201ENSMUST00000111816 Lrch1P62046 709 aa20.23■□□□□ 0.83
Trim71-201ENSMUST00000111816 WaplQ65Z40 1200 aaKnown RBP20.23■□□□□ 0.83
Trim71-201ENSMUST00000111816 Tnip3A0A1D5RMN0 279 aa20.23■□□□□ 0.83
Trim71-201ENSMUST00000111816 Pi16Q9ET66 489 aa20.23■□□□□ 0.83
Trim71-201ENSMUST00000111816 Slc8a3S4R2P9 928 aa20.23■□□□□ 0.83
Trim71-201ENSMUST00000111816 Soga1E1U8D0 1418 aa20.23■□□□□ 0.83
Trim71-201ENSMUST00000111816 Zranb1Q7M760 708 aa20.23■□□□□ 0.83
Trim71-201ENSMUST00000111816 Pik3ap1Q9EQ32 811 aa20.23■□□□□ 0.83
Trim71-201ENSMUST00000111816 Prdm16A2A935 1275 aa20.23■□□□□ 0.83
Trim71-201ENSMUST00000111816 Slc4a2P13808 1237 aaKnown RBP20.23■□□□□ 0.83
Trim71-201ENSMUST00000111816 C130026I21RikQ8C898 291 aa20.23■□□□□ 0.83
Trim71-201ENSMUST00000111816 Nup58Q8R332 587 aa20.23■□□□□ 0.83
Trim71-201ENSMUST00000111816 1700109H08RikQ9D9C0 210 aa20.23■□□□□ 0.83
Trim71-201ENSMUST00000111816 Zfp418Q8BFS8 652 aa20.23■□□□□ 0.83
Trim71-201ENSMUST00000111816 Pdzrn4E9PUZ9 1014 aa20.23■□□□□ 0.83
Trim71-201ENSMUST00000111816 Actn4P57780 912 aaKnown RBP20.23■□□□□ 0.83
Trim71-201ENSMUST00000111816 Krt19P19001 403 aa20.23■□□□□ 0.83
Trim71-201ENSMUST00000111816 Arhgap17Q3UIA2 846 aa20.23■□□□□ 0.83
Trim71-201ENSMUST00000111816 Nsmce1Q9D720 266 aa20.23■□□□□ 0.83
Trim71-201ENSMUST00000111816 Zmym3Q9JLM4 1370 aa20.22■□□□□ 0.83
Trim71-201ENSMUST00000111816 ParvgQ9ERD8 331 aa20.22■□□□□ 0.83
Trim71-201ENSMUST00000111816 Pdcd6ipQ9WU78 869 aaKnown RBP20.22■□□□□ 0.83
Trim71-201ENSMUST00000111816 Sh3gl2Q62420 352 aa20.22■□□□□ 0.83
Trim71-201ENSMUST00000111816 CadpsQ80TJ1 1355 aa20.22■□□□□ 0.83
Trim71-201ENSMUST00000111816 Atf7ipQ7TT18 1306 aa20.22■□□□□ 0.83
Trim71-201ENSMUST00000111816 Cdk19Q8BWD8 501 aa20.22■□□□□ 0.83
Trim71-201ENSMUST00000111816 Kdm2bQ6P1G2 1309 aa20.22■□□□□ 0.83
Trim71-201ENSMUST00000111816 Arhgap44Q5SSM3 814 aa20.22■□□□□ 0.83
Trim71-201ENSMUST00000111816 Anks6Q6GQX6 883 aa20.22■□□□□ 0.83
Trim71-201ENSMUST00000111816 Fgd4Q91ZT5 766 aa20.22■□□□□ 0.83
Trim71-201ENSMUST00000111816 Trim8Q99PJ2 551 aa20.22■□□□□ 0.83
Trim71-201ENSMUST00000111816 Sar1bQ9CQC9 198 aa20.22■□□□□ 0.83
Trim71-201ENSMUST00000111816 Tmed10Q9D1D4 219 aaKnown RBP20.22■□□□□ 0.83
Trim71-201ENSMUST00000111816 Slc14a2Q8R4T9 930 aa20.21■□□□□ 0.83
Trim71-201ENSMUST00000111816 Kcnh5Q920E3 988 aa20.21■□□□□ 0.83
Trim71-201ENSMUST00000111816 Vil1Q62468 827 aa20.21■□□□□ 0.83
Trim71-201ENSMUST00000111816 Anapc5Q8BTZ4 740 aa20.21■□□□□ 0.83
Trim71-201ENSMUST00000111816 DymQ8CHY3 669 aa20.21■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 15.6 ms