RNA–Protein interactions for RNA: ENSMUST00000087883.12

Col3a1-201, Transcript of Collagen alpha-1(III) chain, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Col3a1, Length 5,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col3a1-201ENSMUST00000087883 Ctnna1P26231 906 aaKnown RBP15.52■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Pde1bQ01065 535 aa15.52■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Tut1Q8R3F9 869 aa15.52■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Lonrf3Q9D4H7 753 aa15.52■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Sept3Q9Z1S5 350 aa15.52■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Kif1bpQ6ZPU9 617 aa15.51■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Parp1P11103 1013 aaKnown RBP15.51■□□□□ 0.07
Col3a1-201ENSMUST00000087883 CtcfQ61164 736 aaKnown RBP15.51■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Naa30Q8CES0 364 aa15.51■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Actn2Q9JI91 894 aa15.51■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Enox2Q8R0Z2 598 aa15.51■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Speer3W4VSP1 261 aa15.51■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Ppp2r2cQ8BG02 447 aa15.51■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Clasp2Q8BRT1 1286 aaKnown RBP15.51■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Sult6b1P0CC03 303 aa15.5■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Cct6aP80317 531 aaKnown RBP15.5■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Lig3P97386 1015 aa15.5■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Rnf40Q3U319 1001 aa15.5■□□□□ 0.07
Col3a1-201ENSMUST00000087883 SympkQ80X82 1284 aa15.5■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Atg4a-psA0A0G2JFS9 396 aa15.5■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Nub1P54729 614 aa15.5■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Snrpa1P57784 255 aaKnown RBP15.5■□□□□ 0.07
Col3a1-201ENSMUST00000087883 RragaQ80X95 313 aa15.5■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Atg4aQ8C9S8 396 aa15.5■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Stoml1Q8CI66 399 aa15.5■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Cyp2ab1S4R196 498 aa15.5■□□□□ 0.07
Col3a1-201ENSMUST00000087883 1700006A11RikB9EHI3 544 aa15.5■□□□□ 0.07
Col3a1-201ENSMUST00000087883 GabpaQ00422 454 aa15.5■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Tmed1Q3V009 227 aa15.5■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Cacna2d2Q6PHS9 1154 aa15.5■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Kcnj14Q8JZN3 434 aa15.5■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Msantd4Q91YU3 345 aa15.5■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Eid1Q9DCR4 169 aa15.5■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Ccnt1Q9QWV9 724 aaKnown RBP15.5■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Ca8P28651 291 aa15.5■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Birc2Q62210 612 aa15.5■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Rab34Q64008 259 aa15.5■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Thap12Q9CUX1 758 aa15.5■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Psma7Q9Z2U0 248 aa15.5■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Lrrc8aQ80WG5 810 aa15.49■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Lrrd1Q8C0R9 853 aa15.49■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Ap1b1O35643 943 aaKnown RBP15.49■□□□□ 0.07
Col3a1-201ENSMUST00000087883 IkbkgO88522 412 aa15.49■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Slc26a7Q8R2Z3 656 aa15.49■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Spc24Q9D083 201 aa15.49■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Mroh9G5E8L9 891 aa15.49■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Enc1O35709 589 aa15.49■□□□□ 0.07
Col3a1-201ENSMUST00000087883 LdhaP06151 332 aaKnown RBP15.49■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Sparcl1P70663 650 aa15.49■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Zfp91Q62511 572 aa15.49■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Ccdc189Q6NZQ0 333 aa15.49■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Osbpl1aQ91XL9 950 aa15.49■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Appbp2Q9DAX9 585 aa15.49■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Gkap1Q9JMB0 366 aa15.49■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Prl3d3A0A0M6L0J6 224 aa15.49■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Eya2O08575 532 aa15.49■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Lrriq3Q14DL3 633 aa15.49■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Pcdhb2Q91Y00 799 aa15.49■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Dph5Q9CWQ0 281 aa15.49■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Dnajc10Q9DC23 793 aa15.49■□□□□ 0.07
Col3a1-201ENSMUST00000087883 BC005561E9Q5E2 1589 aa15.48■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Cyp2j7A0A140T8U1 504 aa15.48■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Prr29B1ARI9 187 aa15.48■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Pola1P33609 1465 aa15.48■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Herc4Q6PAV2 1057 aa15.48■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Znf76Q8BMU0 568 aa15.48■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Tbx22Q8K402 517 aa15.48■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Sh2b1Q91ZM2 756 aa15.48■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Tfcp2Q9ERA0 502 aa15.48■□□□□ 0.07
Col3a1-201ENSMUST00000087883 EspnlQ3UYR4 1005 aa15.48■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Tmtc2Q56A06 836 aa15.48■□□□□ 0.07
Col3a1-201ENSMUST00000087883 HscbQ8K3A0 234 aa15.48■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Pfkfb1P70266 471 aa15.48■□□□□ 0.07
Col3a1-201ENSMUST00000087883 B4galnt4Q766D5 1034 aa15.48■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Mapkbp1Q6NS57 1503 aa15.47■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Retreg2Q6NS82 541 aa15.47■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Prkab2Q6PAM0 271 aa15.47■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Ankrd13dQ6PD24 605 aa15.47■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Acot11Q8VHQ9 594 aa15.47■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Lrp2bpQ9D4C6 346 aa15.47■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Atp6v1aP50516 617 aaKnown RBP15.47■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Eya1P97767 591 aa15.47■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Swap70Q6A028 585 aaKnown RBP15.47■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Slc5a4bQ91ZP4 660 aa15.47■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Mybl2P48972 704 aa15.47■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Sp4Q62445 782 aa15.47■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Actr5Q80US4 605 aaKnown RBP15.47■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Lonp1Q8CGK3 949 aaKnown RBP15.47■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Cabp7Q91ZM8 215 aa15.47■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Arpp21Q9DCB4 807 aa15.47■□□□□ 0.07
Col3a1-201ENSMUST00000087883 A0A1W2P7S8 802 aa15.47■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Eef1bO70251 225 aaKnown RBP15.47■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Rad23aP54726 363 aa15.47■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Nsun2Q1HFZ0 757 aaKnown RBP15.47■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Cdc5lQ6A068 802 aaKnown RBP15.47■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Nup58Q8R332 587 aa15.47■□□□□ 0.07
Col3a1-201ENSMUST00000087883 EhhadhQ9DBM2 718 aa15.47■□□□□ 0.07
Col3a1-201ENSMUST00000087883 ChmQ9QXG2 665 aa15.47■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Taf4bG5E8Z2 855 aa15.46■□□□□ 0.07
Col3a1-201ENSMUST00000087883 Pde11aP0C1Q2 933 aa15.46■□□□□ 0.07
Retrieved 100 of 22,080 RNA–protein pairs in 30.7 ms