RNA–Protein interactions for RNA: ENSMUST00000085546.12

Hmgb1-201, Transcript of High mobility group protein B1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Hmgb1, Length 2,838 nt, Biotype protein coding, Subcellular localisation Axon, Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgb1-201ENSMUST00000085546 Gm9048A0A1W2P7H4 802 aa10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 A0A1W2P7S8 802 aa10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 A0A1W2P7Z8 802 aa10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Gm9046A0A1W2P855 802 aa10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Luc7l3Q5SUF2 432 aaKnown RBP10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Cdc5lQ6A068 802 aaKnown RBP10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Srek1Q8BZX4 494 aaKnown RBP10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Dnm1lQ8K1M6 742 aa10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Vstm4T1NXB5 319 aa10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 CltaO08585 235 aa10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Sstr3P30935 428 aa10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Gsdma2Q32M21 443 aa10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Ctdnep1Q3TP92 244 aa10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Trim80Q3V061 624 aa10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Pde1cQ64338 706 aa10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Asnsd1Q8BFS9 627 aa10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Acbd3Q8BMP6 525 aa10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Rps6kb1Q8BSK8 525 aa10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 GlmnQ8BZM1 596 aa10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Tmc2Q8R4P4 888 aa10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 BaatQ91X34 420 aa10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Lztfl1Q9JHQ5 299 aa10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Krt27Q9Z320 448 aa10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Sall3Q62255 1320 aa10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Etnk2A7MCT6 385 aa10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 PnnO35691 725 aaKnown RBP10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Gnat1P20612 350 aa10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Stat1P42225 749 aa10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 NcstnP57716 708 aa10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Dab2P98078 766 aa10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Atp8b2P98199 1209 aa10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Igf2bp2Q5SF07 592 aaKnown RBP10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Foxd1Q61345 456 aa10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Eif4bQ8BGD9 611 aaKnown RBP10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Anapc5Q8BTZ4 740 aa10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Leng8Q8CBY3 785 aaKnown RBP10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Atf7Q8R0S1 413 aa10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Terf2ipQ91VL8 393 aa10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Arhgef28P97433 1693 aa10.94□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Mroh1E0CZ22 1640 aa10.93□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Dnajc25A2ALW5 357 aa10.93□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Traf5P70191 558 aa10.93□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Pkn1P70268 946 aa10.93□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Mpp4Q6P7F1 635 aa10.93□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Znf513Q6PD29 541 aa10.93□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Ppp1r10Q80W00 888 aaKnown RBP10.93□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Ubl4bQ9CQ84 188 aa10.93□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Scrn1Q9CZC8 414 aa10.93□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Nsmce1Q9D720 266 aa10.93□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Scgb2b11A0A087WR49 112 aa10.93□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Rbm8a2A0A0N4SUH6 174 aa10.93□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Rexo5D3YW29 759 aa10.93□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Ccne1Q61457 408 aa10.93□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Rbm17Q8JZX4 405 aaKnown RBP10.93□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Sash3Q8K352 380 aa10.93□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Ccdc65Q8VHI7 493 aa10.93□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Slc12a5Q91V14 1138 aa10.93□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Rbm8aQ9CWZ3 174 aa10.93□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Rrs1Q9CYH6 365 aaKnown RBP10.93□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Gm21671G3UY31 267 aa10.92□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Pdrg1P59048 133 aa10.92□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Rnpc3Q3UZ01 514 aaKnown RBP10.92□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Cyfip2Q5SQX6 1253 aa10.92□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Ovgp1Q62010 721 aa10.92□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Ddx11Q6AXC6 880 aa10.92□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Ddx58Q6Q899 926 aa10.92□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Ubxn10Q8BG34 277 aa10.92□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Rufy1Q8BIJ7 712 aa10.92□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Matr3Q8K310 846 aaKnown RBP10.92□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 HnrnpmQ9D0E1 729 aaKnown RBP10.92□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Ccdc130Q9D516 385 aa10.92□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Tube1Q9D6T1 475 aa10.92□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Ascc1Q9D8Z1 356 aaKnown RBP10.92□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 PyglQ9ET01 850 aa10.92□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Spef2Q8C9J3 1734 aa10.92□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Stk36Q69ZM6 1316 aa10.92□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Fbf1A2A870 1173 aa10.92□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Usp35M0QWN7 1009 aa10.92□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Klc1O88447 541 aa10.92□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 ClgnP52194 611 aa10.92□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Ppfia3P60469 1194 aa10.92□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Xlr3bQ6P205 226 aa10.92□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Hook2Q7TMK6 716 aa10.92□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Pank4Q80YV4 820 aa10.92□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Gramd4Q8CB44 633 aa10.92□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Nup133Q8R0G9 1155 aa10.92□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Cys1Q8R4T1 145 aa10.92□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Syap1Q9D5V6 365 aa10.92□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 1700109H08RikQ9D9C0 210 aa10.92□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Lrrc34Q9DAM1 415 aa10.92□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Cul3Q9JLV5 768 aa10.92□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Ak2Q9WTP6 239 aa10.92□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 PalldQ9ET54 1408 aa10.92□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Ccdc170D3YXL0 722 aa10.91□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Tada2bD3Z4Z0 420 aaKnown RBP10.91□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Zfp105G3X9I0 524 aa10.91□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Zfpm1O35615 995 aa10.91□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Ccdc172Q810N9 267 aa10.91□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Ccdc158Q8CDI6 1109 aa10.91□□□□□ -0.66
Hmgb1-201ENSMUST00000085546 Arhgap18Q8K0Q5 663 aa10.91□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 21.1 ms