RNA–Protein interactions for RNA: ENSMUST00000069187.11

Trim23-203, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

TSL 1 (best) BASIC

Gene Trim23, Length 3,546 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-203ENSMUST00000069187 CpzQ8R4V4 654 aa13.02□□□□□ -0.33
Trim23-203ENSMUST00000069187 Ppil4Q9CXG3 492 aaKnown RBP13.02□□□□□ -0.33
Trim23-203ENSMUST00000069187 Slurp2P0DP59 97 aa13.01□□□□□ -0.33
Trim23-203ENSMUST00000069187 Il15P48346 162 aa13.01□□□□□ -0.33
Trim23-203ENSMUST00000069187 Sptlc2P97363 560 aaKnown RBP13.01□□□□□ -0.33
Trim23-203ENSMUST00000069187 Fchsd1Q6PFY1 688 aa13.01□□□□□ -0.33
Trim23-203ENSMUST00000069187 Strip1Q8C079 837 aa13.01□□□□□ -0.33
Trim23-203ENSMUST00000069187 Lama4P97927 1816 aa13.01□□□□□ -0.33
Trim23-203ENSMUST00000069187 Ccdc85cE9Q6B2 420 aa13.01□□□□□ -0.33
Trim23-203ENSMUST00000069187 Pla2g4fQ50L41 855 aa13.01□□□□□ -0.33
Trim23-203ENSMUST00000069187 Abtb2Q7TQI7 1024 aa13.01□□□□□ -0.33
Trim23-203ENSMUST00000069187 Lrrfip2Q91WK0 415 aa13.01□□□□□ -0.33
Trim23-203ENSMUST00000069187 Gnl2Q99LH1 728 aaKnown RBP13.01□□□□□ -0.33
Trim23-203ENSMUST00000069187 Ube3bQ9ES34 1070 aa13.01□□□□□ -0.33
Trim23-203ENSMUST00000069187 FosbP13346 338 aa13.01□□□□□ -0.33
Trim23-203ENSMUST00000069187 Znhit6Q3UFB2 460 aaKnown RBP13.01□□□□□ -0.33
Trim23-203ENSMUST00000069187 Smc1bQ920F6 1248 aa13.01□□□□□ -0.33
Trim23-203ENSMUST00000069187 Pus3Q9JI38 481 aa13.01□□□□□ -0.33
Trim23-203ENSMUST00000069187 Cdc45Q9Z1X9 566 aa13.01□□□□□ -0.33
Trim23-203ENSMUST00000069187 Exoc3l2D3YUP5 789 aa13□□□□□ -0.33
Trim23-203ENSMUST00000069187 Celf1P28659 486 aaKnown RBP13□□□□□ -0.33
Trim23-203ENSMUST00000069187 Exosc10P56960 887 aaKnown RBP13□□□□□ -0.33
Trim23-203ENSMUST00000069187 Ppp1r21Q3TDD9 780 aa13□□□□□ -0.33
Trim23-203ENSMUST00000069187 Ttll12Q3UDE2 639 aa13□□□□□ -0.33
Trim23-203ENSMUST00000069187 Tubb2aQ7TMM9 445 aa13□□□□□ -0.33
Trim23-203ENSMUST00000069187 Tubb2bQ9CWF2 445 aa13□□□□□ -0.33
Trim23-203ENSMUST00000069187 IncenpQ9WU62 880 aa13□□□□□ -0.33
Trim23-203ENSMUST00000069187 Bin1O08539 588 aaKnown RBP13□□□□□ -0.33
Trim23-203ENSMUST00000069187 Usp5P56399 858 aaKnown RBP13□□□□□ -0.33
Trim23-203ENSMUST00000069187 Gm28047Q3US59 414 aa13□□□□□ -0.33
Trim23-203ENSMUST00000069187 1810065E05RikQ5NC41 235 aa13□□□□□ -0.33
Trim23-203ENSMUST00000069187 Klra4Q60651 263 aa13□□□□□ -0.33
Trim23-203ENSMUST00000069187 Recql4Q75NR7 1216 aaKnown RBP13□□□□□ -0.33
Trim23-203ENSMUST00000069187 Fsd1Q7TPM6 496 aa13□□□□□ -0.33
Trim23-203ENSMUST00000069187 Ptcd1Q8C2E4 695 aaKnown RBP13□□□□□ -0.33
Trim23-203ENSMUST00000069187 Arl8aQ8VEH3 186 aa13□□□□□ -0.33
Trim23-203ENSMUST00000069187 Gm3409A0A0G2JE67 319 aa13□□□□□ -0.33
Trim23-203ENSMUST00000069187 Ercc3P49135 783 aa13□□□□□ -0.33
Trim23-203ENSMUST00000069187 Plekhf1Q3TB82 279 aa13□□□□□ -0.33
Trim23-203ENSMUST00000069187 Ncaph2Q8BSP2 607 aa13□□□□□ -0.33
Trim23-203ENSMUST00000069187 PnnO35691 725 aaKnown RBP12.99□□□□□ -0.33
Trim23-203ENSMUST00000069187 Ccdc57Q6PHN1 1016 aa12.99□□□□□ -0.33
Trim23-203ENSMUST00000069187 Igsf3Q6ZQA6 1194 aa12.99□□□□□ -0.33
Trim23-203ENSMUST00000069187 Nxf7Q80SZ6 620 aaKnown RBP12.99□□□□□ -0.33
Trim23-203ENSMUST00000069187 Sh2b1Q91ZM2 756 aa12.99□□□□□ -0.33
Trim23-203ENSMUST00000069187 Magi2Q9WVQ1 1275 aa12.99□□□□□ -0.33
Trim23-203ENSMUST00000069187 Kif23E9Q5G3 953 aa12.99□□□□□ -0.33
Trim23-203ENSMUST00000069187 Cdr2P97817 455 aa12.99□□□□□ -0.33
Trim23-203ENSMUST00000069187 Apba2P98084 750 aa12.99□□□□□ -0.33
Trim23-203ENSMUST00000069187 Nek5Q7TSC3 627 aa12.99□□□□□ -0.33
Trim23-203ENSMUST00000069187 Znf771Q8BJ90 317 aa12.99□□□□□ -0.33
Trim23-203ENSMUST00000069187 Pms1Q8K119 917 aa12.99□□□□□ -0.33
Trim23-203ENSMUST00000069187 Nek9Q8K1R7 984 aa12.99□□□□□ -0.33
Trim23-203ENSMUST00000069187 Prc1Q99K43 603 aaKnown RBP12.99□□□□□ -0.33
Trim23-203ENSMUST00000069187 Tbc1d7Q9D0K0 293 aa12.99□□□□□ -0.33
Trim23-203ENSMUST00000069187 MycbpQ9EQS3 103 aa12.99□□□□□ -0.33
Trim23-203ENSMUST00000069187 Sycp2lA0A0M3U1B0 842 aa12.99□□□□□ -0.33
Trim23-203ENSMUST00000069187 NefhP19246 1090 aa12.99□□□□□ -0.33
Trim23-203ENSMUST00000069187 Tubb5P99024 444 aaKnown RBP12.99□□□□□ -0.33
Trim23-203ENSMUST00000069187 Tbx2Q60707 711 aa12.99□□□□□ -0.33
Trim23-203ENSMUST00000069187 Glg1Q61543 1175 aaKnown RBP12.99□□□□□ -0.33
Trim23-203ENSMUST00000069187 Tmem67Q8BR76 992 aa12.99□□□□□ -0.33
Trim23-203ENSMUST00000069187 Rec8Q8C5S7 591 aa12.99□□□□□ -0.33
Trim23-203ENSMUST00000069187 Evc2Q8K1G2 1220 aa12.99□□□□□ -0.33
Trim23-203ENSMUST00000069187 Appbp2Q9DAX9 585 aa12.99□□□□□ -0.33
Trim23-203ENSMUST00000069187 Pfkfb1P70266 471 aa12.98□□□□□ -0.33
Trim23-203ENSMUST00000069187 Cct2P80314 535 aaKnown RBP12.98□□□□□ -0.33
Trim23-203ENSMUST00000069187 Clic4Q9QYB1 253 aa12.98□□□□□ -0.33
Trim23-203ENSMUST00000069187 Letm1Q9Z2I0 738 aa12.98□□□□□ -0.33
Trim23-203ENSMUST00000069187 Sall1Q9ER74 1322 aa12.98□□□□□ -0.33
Trim23-203ENSMUST00000069187 RargP18911 458 aaKnown RBP12.98□□□□□ -0.33
Trim23-203ENSMUST00000069187 Lmod1Q8BVA4 595 aa12.98□□□□□ -0.33
Trim23-203ENSMUST00000069187 Gdap1l1Q8VE33 370 aa12.98□□□□□ -0.33
Trim23-203ENSMUST00000069187 Hps3Q91VB4 1002 aa12.98□□□□□ -0.33
Trim23-203ENSMUST00000069187 Terf2ipQ91VL8 393 aa12.98□□□□□ -0.33
Trim23-203ENSMUST00000069187 RabggtaQ9JHK4 567 aa12.98□□□□□ -0.33
Trim23-203ENSMUST00000069187 Ankrd31A0A140LI88 1765 aa12.98□□□□□ -0.33
Trim23-203ENSMUST00000069187 Pramel3A2AHA7 463 aa12.97□□□□□ -0.33
Trim23-203ENSMUST00000069187 Gm7903A2AWL1 463 aa12.97□□□□□ -0.33
Trim23-203ENSMUST00000069187 AV320801A2AWL3 467 aa12.97□□□□□ -0.33
Trim23-203ENSMUST00000069187 Gm15023L7MUB4 467 aa12.97□□□□□ -0.33
Trim23-203ENSMUST00000069187 Ccng2O08918 344 aa12.97□□□□□ -0.33
Trim23-203ENSMUST00000069187 LtkP08923 888 aa12.97□□□□□ -0.33
Trim23-203ENSMUST00000069187 Spty2d1Q68FG3 682 aa12.97□□□□□ -0.33
Trim23-203ENSMUST00000069187 Atxn2lQ7TQH0 1049 aaKnown RBP12.97□□□□□ -0.33
Trim23-203ENSMUST00000069187 Cfap69Q8BH53 942 aa12.97□□□□□ -0.33
Trim23-203ENSMUST00000069187 Atad2Q8CDM1 1040 aa12.97□□□□□ -0.33
Trim23-203ENSMUST00000069187 Ppm1fQ8CGA0 452 aa12.97□□□□□ -0.33
Trim23-203ENSMUST00000069187 Map3k15A2AQW0 1331 aa12.97□□□□□ -0.33
Trim23-203ENSMUST00000069187 A0A1W2P7S8 802 aa12.97□□□□□ -0.33
Trim23-203ENSMUST00000069187 Ranbp1P34022 203 aaKnown RBP12.97□□□□□ -0.33
Trim23-203ENSMUST00000069187 Usp13Q5BKP2 858 aa12.97□□□□□ -0.33
Trim23-203ENSMUST00000069187 Jakmip3Q5DTN8 844 aa12.97□□□□□ -0.33
Trim23-203ENSMUST00000069187 Cdc5lQ6A068 802 aaKnown RBP12.97□□□□□ -0.33
Trim23-203ENSMUST00000069187 IqcgQ80W32 419 aa12.97□□□□□ -0.33
Trim23-203ENSMUST00000069187 Q8C1R3 189 aa12.97□□□□□ -0.33
Trim23-203ENSMUST00000069187 Trim55G3X8Y1 545 aa12.97□□□□□ -0.33
Trim23-203ENSMUST00000069187 Mb21d2Q8C525 428 aa12.97□□□□□ -0.33
Trim23-203ENSMUST00000069187 Emilin1Q99K41 1017 aa12.97□□□□□ -0.33
Trim23-203ENSMUST00000069187 Mrpl12Q9DB15 201 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 22,080 RNA–protein pairs in 42.8 ms