RNA–Protein interactions for RNA: ENSMUST00000038665.5

Ptchd1-201, Transcript of Patched domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptchd1, Length 2,768 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd1-201ENSMUST00000038665 Mindy4Q3UQI9 744 aa9.77□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Anp32cQ64G17 123 aa9.77□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Ttll4Q80UG8 1193 aa9.77□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Rbm28Q8CGC6 750 aaKnown RBP9.77□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Mical1Q8VDP3 1048 aa9.77□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Mei1Q9D4I2 1268 aa9.77□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 AfdnQ9QZQ1 1820 aaKnown RBP9.77□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Dnajc25A2ALW5 357 aa9.77□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Stag2O35638 1231 aa9.77□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Cnnm2Q3TWN3 875 aa9.77□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Ehmt1Q5DW34 1296 aa9.77□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 ErmnQ5EBJ4 281 aa9.77□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Prpf4bQ61136 1007 aaKnown RBP9.77□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Dnaaf2Q8BPI1 814 aa9.77□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Triml1Q8BVP1 470 aa9.77□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 MbipQ99LQ1 341 aa9.77□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Dydc2Q9D3X8 139 aa9.77□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Casz1Q9CWL2 1761 aa9.77□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 GabreA2AMW3 916 aa9.76□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Phldb3E9QAF4 648 aa9.76□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Ppef2O35385 757 aa9.76□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Gm28047Q3US59 414 aa9.76□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Ubr3Q5U430 1889 aa9.76□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Madcam1Q61826 405 aa9.76□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Vps37dQ810I0 261 aa9.76□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Clic6Q8BHB9 596 aa9.76□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 QarsQ8BML9 775 aa9.76□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Syt10Q9R0N4 523 aa9.76□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Ltn1Q6A009 1767 aa9.76□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Wdr19Q3UGF1 1341 aa9.76□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Fam184aE9PW83 1143 aa9.76□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Rsph10bE9PYQ0 876 aa9.76□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Foxp1P58462 705 aa9.76□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Psd3Q2PFD7 1037 aa9.76□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Ift122Q6NWV3 1182 aa9.76□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Gga3Q8BMI3 718 aa9.76□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Zfp202Q8C879 641 aa9.76□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Fez1Q8K0X8 392 aa9.76□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Vps16Q920Q4 839 aa9.76□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 SrrtQ99MR6 875 aaKnown RBP9.76□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Hic2Q9JLZ6 619 aaKnown RBP9.76□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Aox3G3X982 1335 aa9.76□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Mtx1P47802 317 aa9.75□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Terf1P70371 421 aa9.75□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Cplx2P84086 134 aa9.75□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Dhx40Q6PE54 779 aaKnown RBP9.75□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Tob2Q9JM55 345 aa9.75□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Slfn1Q9Z0I7 337 aa9.75□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Ccdc88aQ5SNZ0 1873 aa9.75□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 1700003F12RikA2AKE5 210 aa9.75□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Eif6O55135 245 aa9.75□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Rrp1P56183 494 aaKnown RBP9.75□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Rpusd2Q149F1 553 aa9.75□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Ckap2Q3V1H1 664 aa9.75□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Strip1Q8C079 837 aa9.75□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Mknk2Q8CDB0 459 aa9.75□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Ccdc47Q9D024 483 aaKnown RBP9.75□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Cdkl5Q3UTQ8 938 aa9.75□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Slc27a1Q60714 646 aa9.75□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Fam196bQ6GQV1 535 aa9.75□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Ccp110Q7TSH4 1004 aa9.75□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Rnf41Q8BH75 317 aa9.75□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Serpina10Q8R121 448 aa9.75□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Gpr108Q91WD0 569 aa9.75□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Txnrd3Q99MD6 652 aa9.75□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 BccipQ9CWI3 316 aa9.75□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Gtf2iQ9ESZ8 998 aaKnown RBP9.75□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Magi2Q9WVQ1 1275 aa9.75□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Zmym2Q9CU65 1376 aa9.74□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Cdc27A2A6Q5 825 aa9.74□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Atp8b5A3FIN4 1183 aa9.74□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Slc1a4O35874 532 aa9.74□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Cacnb3P54285 484 aa9.74□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Fhdc1Q3ULZ2 1149 aa9.74□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Tekt3Q6X6Z7 490 aa9.74□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Cep120Q7TSG1 988 aa9.74□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Tmem179Q8BHH9 233 aa9.74□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Znf428Q8C1M2 176 aa9.74□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Q8C6G1 249 aa9.74□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Luzp1Q8R4U7 1068 aaKnown RBP9.74□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Hps4Q99KG7 671 aa9.74□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Yeats4Q9CR11 227 aaKnown RBP9.74□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Pnpla6Q3TRM4 1355 aa9.74□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Gm43638A0A0J9YU36 694 aa9.74□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 MeiocA2AG06 965 aa9.74□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Clec11aO88200 328 aa9.74□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Grem2O88273 168 aa9.74□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Atp6v0a2P15920 856 aa9.74□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 U2af2P26369 475 aaKnown RBP9.74□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Pcsk7Q61139 770 aa9.74□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Tbc1d5Q80XQ2 815 aa9.74□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Paf1Q8K2T8 535 aa9.74□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Heg1E9Q7X6 1337 aa9.74□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Arfgef1G3X9K3 1846 aaKnown RBP9.73□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Gucy1a2F8VQK3 730 aa9.73□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Stx1aO35526 288 aa9.73□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Il7P10168 154 aa9.73□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Ccdc162pQ0VG85 912 aa9.73□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Hvcn1Q3U2S8 269 aa9.73□□□□□ -0.85
Ptchd1-201ENSMUST00000038665 Pex1Q5BL07 1284 aa9.73□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 25 ms