RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Gm12185Q5NCB2 835 aa15.31■□□□□ 0.04
Nup88-201ENSMUST00000035283 LarsQ8BMJ2 1178 aa15.31■□□□□ 0.04
Nup88-201ENSMUST00000035283 Tcp11l2Q8K1H7 517 aa15.31■□□□□ 0.04
Nup88-201ENSMUST00000035283 Tspyl4Q8VD63 406 aa15.31■□□□□ 0.04
Nup88-201ENSMUST00000035283 Chaf1aQ9QWF0 911 aa15.31■□□□□ 0.04
Nup88-201ENSMUST00000035283 Myh1Q5SX40 1942 aa15.31■□□□□ 0.04
Nup88-201ENSMUST00000035283 A0A1W2P6Q8 802 aa15.31■□□□□ 0.04
Nup88-201ENSMUST00000035283 Gm9048A0A1W2P7H4 802 aa15.31■□□□□ 0.04
Nup88-201ENSMUST00000035283 A0A1W2P7S8 802 aa15.31■□□□□ 0.04
Nup88-201ENSMUST00000035283 A0A1W2P7Z8 802 aa15.31■□□□□ 0.04
Nup88-201ENSMUST00000035283 Gm9046A0A1W2P855 802 aa15.31■□□□□ 0.04
Nup88-201ENSMUST00000035283 Ces1hD3Z298 562 aa15.31■□□□□ 0.04
Nup88-201ENSMUST00000035283 Trap1aP19473 224 aa15.31■□□□□ 0.04
Nup88-201ENSMUST00000035283 LtbrP50284 415 aa15.31■□□□□ 0.04
Nup88-201ENSMUST00000035283 Rad23aP54726 363 aa15.31■□□□□ 0.04
Nup88-201ENSMUST00000035283 ItpripQ3TNL8 555 aa15.31■□□□□ 0.04
Nup88-201ENSMUST00000035283 Cdc5lQ6A068 802 aaKnown RBP15.31■□□□□ 0.04
Nup88-201ENSMUST00000035283 Pde5aQ8CG03 865 aa15.31■□□□□ 0.04
Nup88-201ENSMUST00000035283 Uap1Q91YN5 522 aa15.31■□□□□ 0.04
Nup88-201ENSMUST00000035283 Cap2Q9CYT6 476 aa15.31■□□□□ 0.04
Nup88-201ENSMUST00000035283 SelenooQ9DBC0 667 aa15.31■□□□□ 0.04
Nup88-201ENSMUST00000035283 Pik3ap1Q9EQ32 811 aa15.31■□□□□ 0.04
Nup88-201ENSMUST00000035283 GdaQ9R111 454 aa15.31■□□□□ 0.04
Nup88-201ENSMUST00000035283 Kdm3aQ6PCM1 1323 aa15.3■□□□□ 0.04
Nup88-201ENSMUST00000035283 Cyp2j7A0A140T8U1 504 aa15.3■□□□□ 0.04
Nup88-201ENSMUST00000035283 Prl3d1P18121 224 aa15.3■□□□□ 0.04
Nup88-201ENSMUST00000035283 NapbP28663 298 aa15.3■□□□□ 0.04
Nup88-201ENSMUST00000035283 Tdo2P48776 406 aa15.3■□□□□ 0.04
Nup88-201ENSMUST00000035283 Ica1lQ3TY65 431 aa15.3■□□□□ 0.04
Nup88-201ENSMUST00000035283 Agtpbp1Q641K1 1218 aa15.3■□□□□ 0.04
Nup88-201ENSMUST00000035283 Rtn1Q8K0T0 780 aa15.3■□□□□ 0.04
Nup88-201ENSMUST00000035283 Iqca1Q9CUL5 857 aa15.3■□□□□ 0.04
Nup88-201ENSMUST00000035283 Cbx8Q9QXV1 362 aa15.3■□□□□ 0.04
Nup88-201ENSMUST00000035283 Bcl9Q9D219 1425 aa15.3■□□□□ 0.04
Nup88-201ENSMUST00000035283 Bin2D3Z6Q9 489 aa15.29■□□□□ 0.04
Nup88-201ENSMUST00000035283 IkbkbO88351 757 aa15.29■□□□□ 0.04
Nup88-201ENSMUST00000035283 RargP18911 458 aaKnown RBP15.29■□□□□ 0.04
Nup88-201ENSMUST00000035283 Wnt7aP24383 349 aa15.29■□□□□ 0.04
Nup88-201ENSMUST00000035283 Sept1P42209 366 aa15.29■□□□□ 0.04
Nup88-201ENSMUST00000035283 Evi5P97366 809 aa15.29■□□□□ 0.04
Nup88-201ENSMUST00000035283 Fam89aQ14BJ1 175 aa15.29■□□□□ 0.04
Nup88-201ENSMUST00000035283 Ift88Q61371 824 aa15.29■□□□□ 0.04
Nup88-201ENSMUST00000035283 Hpcal4Q8BGZ1 191 aa15.29■□□□□ 0.04
Nup88-201ENSMUST00000035283 Thap2Q9D305 217 aa15.29■□□□□ 0.04
Nup88-201ENSMUST00000035283 Klhl40Q9D783 621 aa15.29■□□□□ 0.04
Nup88-201ENSMUST00000035283 Cnpy3Q9DAU1 276 aa15.29■□□□□ 0.04
Nup88-201ENSMUST00000035283 Ckap2Q3V1H1 664 aa15.29■□□□□ 0.04
Nup88-201ENSMUST00000035283 Map3k11Q80XI6 850 aa15.29■□□□□ 0.04
Nup88-201ENSMUST00000035283 Anks1bQ8BIZ1 1259 aa15.29■□□□□ 0.04
Nup88-201ENSMUST00000035283 Rbm43Q99J64 343 aa15.29■□□□□ 0.04
Nup88-201ENSMUST00000035283 Stk39Q9Z1W9 556 aa15.29■□□□□ 0.04
Nup88-201ENSMUST00000035283 Phldb3E9QAF4 648 aa15.28■□□□□ 0.04
Nup88-201ENSMUST00000035283 Znhit6Q3UFB2 460 aaKnown RBP15.28■□□□□ 0.04
Nup88-201ENSMUST00000035283 Cyp4x1Q6A152 507 aa15.28■□□□□ 0.04
Nup88-201ENSMUST00000035283 Snd1Q78PY7 910 aaKnown RBP15.28■□□□□ 0.04
Nup88-201ENSMUST00000035283 Gpr108Q91WD0 569 aa15.28■□□□□ 0.04
Nup88-201ENSMUST00000035283 Pcdha7Q91Y13 937 aa15.28■□□□□ 0.04
Nup88-201ENSMUST00000035283 Krt23Q99PS0 422 aa15.28■□□□□ 0.04
Nup88-201ENSMUST00000035283 Efcc1Q9JJF6 558 aa15.28■□□□□ 0.04
Nup88-201ENSMUST00000035283 Myh7Q91Z83 1935 aa15.28■□□□□ 0.04
Nup88-201ENSMUST00000035283 Gucy2cQ3UWA6 1072 aa15.28■□□□□ 0.04
Nup88-201ENSMUST00000035283 Gpt2Q8BGT5 522 aa15.28■□□□□ 0.04
Nup88-201ENSMUST00000035283 Cdc23Q8BGZ4 597 aa15.28■□□□□ 0.04
Nup88-201ENSMUST00000035283 Hps6Q8BLY7 805 aa15.28■□□□□ 0.04
Nup88-201ENSMUST00000035283 Ppfibp1Q8C8U0 969 aaKnown RBP15.28■□□□□ 0.04
Nup88-201ENSMUST00000035283 Pdcd6ipQ9WU78 869 aaKnown RBP15.28■□□□□ 0.04
Nup88-201ENSMUST00000035283 Myh2G3UW82 1942 aa15.28■□□□□ 0.04
Nup88-201ENSMUST00000035283 A0A0U1RNP2 1173 aa15.27■□□□□ 0.04
Nup88-201ENSMUST00000035283 Krt24A1L317 512 aa15.27■□□□□ 0.04
Nup88-201ENSMUST00000035283 Cul4bA2A432 970 aaKnown RBP15.27■□□□□ 0.04
Nup88-201ENSMUST00000035283 Tpm3-rs7D3Z2H9 248 aa15.27■□□□□ 0.04
Nup88-201ENSMUST00000035283 LbrQ3U9G9 626 aaKnown RBP15.27■□□□□ 0.04
Nup88-201ENSMUST00000035283 Il17raQ60943 864 aa15.27■□□□□ 0.04
Nup88-201ENSMUST00000035283 Rasal3Q8C2K5 1041 aa15.27■□□□□ 0.04
Nup88-201ENSMUST00000035283 Txnrd1Q9JMH6 613 aa15.27■□□□□ 0.04
Nup88-201ENSMUST00000035283 Tiam2Q6ZPF3 1715 aa15.27■□□□□ 0.04
Nup88-201ENSMUST00000035283 Myh7bA2AQP0 1941 aa15.27■□□□□ 0.04
Nup88-201ENSMUST00000035283 Pde8bE9Q4S1 865 aa15.27■□□□□ 0.03
Nup88-201ENSMUST00000035283 Pbx1P41778 430 aa15.27■□□□□ 0.03
Nup88-201ENSMUST00000035283 Krt86P97861 486 aa15.27■□□□□ 0.03
Nup88-201ENSMUST00000035283 Pram1Q6BCL1 675 aa15.27■□□□□ 0.03
Nup88-201ENSMUST00000035283 Cep85Q8BMK0 761 aa15.27■□□□□ 0.03
Nup88-201ENSMUST00000035283 Hgh1Q8C3I8 393 aa15.27■□□□□ 0.03
Nup88-201ENSMUST00000035283 Q8K2W9 541 aa15.27■□□□□ 0.03
Nup88-201ENSMUST00000035283 Riok1Q922Q2 567 aa15.27■□□□□ 0.03
Nup88-201ENSMUST00000035283 Mfap3lQ9D3X9 409 aa15.27■□□□□ 0.03
Nup88-201ENSMUST00000035283 Vsnl1P62761 191 aa15.26■□□□□ 0.03
Nup88-201ENSMUST00000035283 Jakmip3Q5DTN8 844 aa15.26■□□□□ 0.03
Nup88-201ENSMUST00000035283 Sun3Q5SS91 320 aa15.26■□□□□ 0.03
Nup88-201ENSMUST00000035283 Slc27a1Q60714 646 aa15.26■□□□□ 0.03
Nup88-201ENSMUST00000035283 Slc44a1Q6X893 653 aa15.26■□□□□ 0.03
Nup88-201ENSMUST00000035283 Q8C1R3 189 aa15.26■□□□□ 0.03
Nup88-201ENSMUST00000035283 Wasf1Q8R5H6 559 aa15.26■□□□□ 0.03
Nup88-201ENSMUST00000035283 Washc1Q8VDD8 475 aa15.26■□□□□ 0.03
Nup88-201ENSMUST00000035283 Rrp1bQ91YK2 724 aaKnown RBP15.26■□□□□ 0.03
Nup88-201ENSMUST00000035283 Smc1bQ920F6 1248 aa15.26■□□□□ 0.03
Nup88-201ENSMUST00000035283 Mroh6V9GX81 722 aa15.26■□□□□ 0.03
Nup88-201ENSMUST00000035283 Cops6O88545 324 aa15.26■□□□□ 0.03
Nup88-201ENSMUST00000035283 Emc10Q3TAS6 258 aa15.26■□□□□ 0.03
Nup88-201ENSMUST00000035283 Fhod1Q6P9Q4 1197 aa15.26■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 18.8 ms