RNA–Protein interactions for RNA: ENSMUST00000030992.12

Rnf4-201, Transcript of E3 ubiquitin-protein ligase RNF4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Rnf4, Length 2,895 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf4-201ENSMUST00000030992 Cdc5lQ6A068 802 aaKnown RBP14.6□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Kif1bpQ6ZPU9 617 aa14.6□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Dbndd1Q9CZ00 160 aa14.6□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Mrps25Q9D125 171 aaKnown RBP14.6□□□□□ -0.07
Rnf4-201ENSMUST00000030992 GakQ99KY4 1305 aa14.6□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Ltn1Q6A009 1767 aa14.6□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Prss40A6H6T1 365 aa14.6□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Slc1a4O35874 532 aa14.6□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Mapkapk5O54992 473 aa14.6□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Surf1P09925 306 aa14.6□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Celf1P28659 486 aaKnown RBP14.6□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Ppp1r21Q3TDD9 780 aa14.6□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Cdc37Q61081 379 aa14.6□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Znf653Q6YND2 615 aa14.6□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Atp12aQ9Z1W8 1035 aa14.6□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Adgra3Q7TT36 1310 aa14.6□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Acad12D3Z7X0 555 aa14.59□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Tom1O88746 492 aa14.59□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Myo1bP46735 1107 aa14.59□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Sf3b2Q3UJB0 878 aaKnown RBP14.59□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Cyp4x1Q6A152 507 aa14.59□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Panx2Q6IMP4 677 aa14.59□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Zfp251Q6PCX8 632 aa14.59□□□□□ -0.07
Rnf4-201ENSMUST00000030992 QarsQ8BML9 775 aa14.59□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Prpf3Q922U1 683 aaKnown RBP14.59□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Tfcp2Q9ERA0 502 aa14.59□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Ktn1Q61595 1327 aaKnown RBP14.59□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Zscan20B2KFW1 1030 aa14.59□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Cep135Q6P5D4 1140 aa14.59□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Map3k15A2AQW0 1331 aa14.59□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Il15P48346 162 aa14.59□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Rps8P62242 208 aaKnown RBP14.59□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Krt23Q99PS0 422 aa14.59□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Rbm33Q9CXK9 1231 aaKnown RBP14.59□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Pik3ap1Q9EQ32 811 aa14.59□□□□□ -0.07
Rnf4-201ENSMUST00000030992 Myo3bQ1EG27 1305 aa14.58□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Znf568E9PYI1 671 aa14.58□□□□□ -0.08
Rnf4-201ENSMUST00000030992 SsbP32067 415 aaKnown RBP14.58□□□□□ -0.08
Rnf4-201ENSMUST00000030992 PsdQ5DTT2 1024 aa14.58□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Luc7l2Q7TNC4 392 aaKnown RBP14.58□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Ctdspl2Q8BG15 465 aa14.58□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Kiaa0319lQ8K135 1048 aa14.58□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Bcl11bQ99PV8 884 aa14.58□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Myh13B1AR69 1938 aa14.58□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Igsf9bE9PZ19 1328 aa14.58□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Prr16A3KMN5 304 aa14.58□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Cfap69Q8BH53 942 aa14.58□□□□□ -0.08
Rnf4-201ENSMUST00000030992 HmcesQ8R1M0 353 aaKnown RBP14.58□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Ltbp1Q8CG19 1712 aa14.57□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Snapc4Q8BP86 1333 aa14.57□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Ehmt1Q5DW34 1296 aa14.57□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Usp49Q6P9L4 685 aa14.57□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Srp68Q8BMA6 625 aaKnown RBP14.57□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Tubgcp2Q921G8 905 aa14.57□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Polr2dQ9D7M8 142 aaKnown RBP14.57□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Magi2Q9WVQ1 1275 aa14.57□□□□□ -0.08
Rnf4-201ENSMUST00000030992 CoblQ5NBX1 1337 aaKnown RBP14.57□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Dhx8A2A4P0 1244 aaKnown RBP14.57□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Frat1P70339 274 aa14.57□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Plekha7Q3UIL6 1118 aaKnown RBP14.57□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Gm5592Q3V0A6 857 aa14.57□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Csrnp2Q8BGQ2 534 aa14.57□□□□□ -0.08
Rnf4-201ENSMUST00000030992 HlfQ8BW74 295 aa14.57□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Eno4Q8C042 619 aa14.57□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Smc2Q8CG48 1191 aaKnown RBP14.57□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Ubac1Q8VDI7 409 aa14.57□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Card6E9PWH2 1175 aa14.56□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Phldb3E9QAF4 648 aa14.56□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Calm1P0DP26 149 aaKnown RBP14.56□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Calm2P0DP27 149 aaKnown RBP14.56□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Calm3P0DP28 149 aaKnown RBP14.56□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Asnsd1Q8BFS9 627 aa14.56□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Dnm3Q8BZ98 863 aa14.56□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Adarb2Q9JI20 745 aa14.56□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Gm5624F6ZZG8 207 aa14.56□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Abl1P00520 1123 aa14.56□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Wnt7aP24383 349 aa14.56□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Kiaa1468Q148V7 1216 aa14.56□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Esyt2Q3TZZ7 845 aa14.56□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Nom1Q3UFM5 854 aaKnown RBP14.56□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Ift122Q6NWV3 1182 aa14.56□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Vps53Q8CCB4 832 aa14.56□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Sde2Q8K1J5 448 aaKnown RBP14.56□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Creld2Q9CYA0 350 aa14.56□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Tktl2Q9D4D4 627 aa14.56□□□□□ -0.08
Rnf4-201ENSMUST00000030992 GdaQ9R111 454 aa14.56□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Zfyve9A2A8R0 1397 aa14.56□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Znf638Q61464 1960 aaKnown RBP14.56□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Gm43738A0A0G2JEA5 862 aa14.56□□□□□ -0.08
Rnf4-201ENSMUST00000030992 A0A1Y7VML8 143 aa14.56□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Lekr1B2RVN1 116 aa14.56□□□□□ -0.08
Rnf4-201ENSMUST00000030992 PparaP23204 468 aa14.56□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Tdo2P48776 406 aa14.56□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Pknox2Q8BG99 474 aa14.56□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Larp6Q8BN59 492 aa14.56□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Aknad1E9Q8N6 675 aa14.55□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Abcf1Q6P542 837 aaKnown RBP14.55□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Mtmr6Q8VE11 617 aa14.55□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Letm1Q9Z2I0 738 aa14.55□□□□□ -0.08
Rnf4-201ENSMUST00000030992 Nmt2O70311 529 aa14.55□□□□□ -0.08
Retrieved 100 of 22,080 RNA–protein pairs in 14.9 ms