RNA–Protein interactions for RNA: ENSMUST00000022646.8

Nkx3-1-201, Transcript of Homeobox protein Nkx-3.1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nkx3-1, Length 3,195 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-1-201ENSMUST00000022646 Olfr119Q7TRJ5 321 aa17.24■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Mtmr6Q8VE11 617 aa17.24■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Bap1Q99PU7 728 aa17.24■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Irs4Q9Z0Y7 1216 aa17.24■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Prr29B1ARI9 187 aa17.24■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 SsbP32067 415 aaKnown RBP17.24■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Krt39Q6IFX4 482 aa17.24■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Rbm15bQ6PHZ5 887 aaKnown RBP17.24■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Klhl30Q8C3F7 581 aa17.24■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Smc2Q8CG48 1191 aaKnown RBP17.24■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Rbm28Q8CGC6 750 aaKnown RBP17.24■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Iqca1Q9CUL5 857 aa17.24■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Nfatc2ipO09130 412 aa17.23■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Cyp4x1Q6A152 507 aa17.23■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Csrnp2Q8BGQ2 534 aa17.23■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Baiap2l1Q9DBJ3 514 aa17.23■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 AfdnQ9QZQ1 1820 aaKnown RBP17.23■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Dhx8A2A4P0 1244 aaKnown RBP17.23■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Stox1B2RQL2 990 aa17.23■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 CltaO08585 235 aa17.23■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 PnnO35691 725 aaKnown RBP17.23■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 TbcaP48428 108 aaKnown RBP17.23■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Krt40Q6IFX3 439 aa17.23■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Gnl2Q99LH1 728 aaKnown RBP17.23■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Cxcl11Q9JHH5 100 aa17.23■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Diaph1O08808 1255 aa17.22■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Clic6Q8BHB9 596 aa17.22■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Ubac1Q8VDI7 409 aa17.22■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 BccipQ9CWI3 316 aa17.22■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 GdaQ9R111 454 aa17.22■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Bsdc1Q80Y55 427 aa17.22■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Acad12D3Z7X0 555 aa17.22■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Ccdc121E9Q6D3 323 aa17.22■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Phldb3E9QAF4 648 aa17.22■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Sdc2P43407 202 aa17.22■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Mapkapk5O54992 473 aa17.21■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Bcl2l12Q9D3J3 255 aa17.21■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Samd1D3YXK1 519 aa17.21■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Tpm3-rs7D3Z2H9 248 aa17.21■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Ugt1a6bK9J7B2 531 aa17.21■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Tuft1O08970 390 aa17.21■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Cyp3a25O09158 503 aa17.21■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Rtkn2Q14B46 604 aa17.21■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Ppp1r21Q3TDD9 780 aa17.21■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 C87499Q3UX49 493 aa17.21■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Ugt1a6Q64435 531 aa17.21■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Ugt1a7cQ6ZQM8 531 aa17.21■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Asnsd1Q8BFS9 627 aa17.21■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Pus7lQ8CE46 702 aa17.21■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Clstn1Q9EPL2 979 aa17.21■□□□□ 0.35
Nkx3-1-201ENSMUST00000022646 Ankrd63A2ARS0 390 aa17.2■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Prr16A3KMN5 304 aa17.2■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Prss40A6H6T1 365 aa17.2■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Pla2g4bP0C871 782 aa17.2■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 PparaP23204 468 aa17.2■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Pm20d1Q8C165 503 aa17.2■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Nhsl1Q8CAF4 1587 aa17.2■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 A0A1Y7VML8 143 aa17.2■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Pet2A2AHY8 747 aa17.2■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 PcQ05920 1178 aa17.2■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Cfap69Q8BH53 942 aa17.2■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Ankk1Q8BZ25 745 aa17.2■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Sh3bp5lQ99LH9 392 aa17.2■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Psrc1Q9D0P7 329 aa17.2■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Vps33aQ9D2N9 598 aa17.2■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Cbx6Q9DBY5 414 aa17.2■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Lgr5Q9Z1P4 907 aa17.2■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Kmt5bQ3U8K7 883 aa17.2■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Ehmt1Q5DW34 1296 aa17.2■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Abcb6Q9DC29 842 aa17.2■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Gja10Q9WUS4 505 aa17.2■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Myo3bQ1EG27 1305 aa17.19■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Gimap8Q75N62 688 aa17.19■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Lrrd1Q8C0R9 853 aa17.19■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Pde5aQ8CG03 865 aa17.19■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Tgs1Q923W1 853 aa17.19■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Tob2Q9JM55 345 aa17.19■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Rhbdl3P58873 404 aa17.19■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 SfswapQ3USH5 945 aaKnown RBP17.19■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Dpf2Q61103 391 aaKnown RBP17.19■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Arl8aQ8VEH3 186 aa17.19■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 MlphQ91V27 590 aa17.19■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Tomm22Q9CPQ3 142 aa17.19■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Wnt7aP24383 349 aa17.18■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Kif1bpQ6ZPU9 617 aa17.18■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Foxo3Q9WVH4 672 aa17.18■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Igsf9bE9PZ19 1328 aa17.18■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Myl3P09542 204 aa17.18■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Nek1P51954 1203 aa17.18■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Gabpb2P81069 414 aa17.18■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Enox1Q8BHR2 643 aaKnown RBP17.18■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Etf1Q8BWY3 437 aaKnown RBP17.18■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Wdr64Q9D565 1086 aa17.18■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Dnajc5P60904 198 aa17.18■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Smarcc1P97496 1104 aa17.18■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Ctr9Q62018 1173 aaKnown RBP17.18■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Ppp2r5bQ6PD28 497 aa17.18■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 QarsQ8BML9 775 aa17.18■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Ndufb9Q9CQJ8 179 aa17.18■□□□□ 0.34
Nkx3-1-201ENSMUST00000022646 Nmt2O70311 529 aa17.17■□□□□ 0.34
Retrieved 100 of 22,080 RNA–protein pairs in 65.2 ms