RNA–Protein interactions for RNA: ENSMUST00000057185.12

Pcdh1-201, Transcript of Protocadherin 1 (Fragment), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdh1, Length 3,902 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1-201ENSMUST00000057185 Bak1O08734 209 aa7.54□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Gm29666A0A087WQ99 126 aa7.54□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Ighv8-4A0A0A6YW26 117 aa7.54□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 H2al2bA9Z055 111 aa7.54□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Nbl1Q61477 178 aa7.54□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Zfp248Q640N4 576 aa7.54□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Chac1Q8R3J5 223 aa7.54□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 UrahQ9CRB3 118 aa7.54□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Wfdc15bQ9JHY4 80 aa7.54□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 FlnbQ80X90 2602 aaKnown RBP7.53□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 E030018B13RikJ3QMS9 113 aa7.53□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 P0C913 63 aa7.53□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Tmem210Q9D2F0 147 aa7.53□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Usp24B1AY13 2617 aaKnown RBP7.53□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Tcl1b4P56844 120 aa7.53□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Rbx1P62878 108 aa7.53□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Mllt11P97783 90 aa7.53□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Olfr1199Q8VF94 310 aa7.53□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Rab37Q9JKM7 223 aa7.53□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Zzef1Q5SSH7 2924 aa7.53□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Trbv13-1A0A0B4J1P8 112 aa7.53□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Insl3O09107 122 aa7.53□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 SbpP15501 199 aa7.53□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 Gm7489Q3UT34 171 aa7.53□□□□□ -1.2
Pcdh1-201ENSMUST00000057185 ColqO35348 457 aa7.52□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Atp5iQ06185 71 aaKnown RBP7.52□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Trank1Q8BV79 2999 aa7.52□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 BC106179Q8C9L1 186 aa7.52□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 PpdpfQ9CR37 115 aa7.52□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 3110018I06RikQ9CXS0 120 aa7.52□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Lyrm7Q9DA03 104 aa7.52□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 DspE9Q557 2883 aaKnown RBP7.52□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Gm45785A0A1B0GT05 94 aa7.52□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Gm26938S4R185 226 aa7.52□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Arhgap32Q811P8 2089 aa7.52□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Ighv1-77A0A0G2JGS9 117 aa7.52□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Gm35549A0A0N4SUS7 141 aa7.52□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 P01725 110 aa7.52□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Psmg4P0C7N9 123 aa7.52□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Znf239P24399 201 aa7.52□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Tex26Q0VB26 296 aa7.52□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Olfr312Q7TRZ9 308 aa7.52□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Bub3Q9WVA3 326 aa7.52□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Tctex1d4Q8CDY7 219 aa7.51□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Ighv1-9A0A0A6YW37 117 aa7.51□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Umad1E0CX23 159 aa7.51□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 H2-DMb1P35737 261 aa7.51□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Spag11Q8K4N2 71 aa7.51□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Gm28269A0A087WSG3 125 aa7.51□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Igsf23B2RTN2 239 aa7.51□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 P01726 129 aa7.51□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 P04219 140 aa7.51□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Rnf114Q9ET26 229 aa7.51□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Arid1bE9Q4N7 2244 aa7.51□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Igkv2-137A0A0B4J1H6 120 aa7.5□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Gm1968Q3T9I3 115 aa7.5□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Ifitm2Q99J93 144 aa7.5□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Ighv1-74A0A0G2JGK2 117 aa7.5□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 4930447F04RikA2AFR2 126 aa7.5□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Gm20517G3UVU6 152 aa7.5□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Ube2e1P52482 193 aa7.5□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Gm5941Q497P9 117 aa7.5□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Gm1553Q66VB7 94 aa7.5□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Mob4Q6PEB6 225 aa7.5□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Ifitm10Q8BR26 201 aa7.5□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Ormdl2Q9CQZ0 153 aa7.5□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Plac1Q9JI83 173 aa7.5□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Trav6-4A0A075B6B4 115 aa7.49□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Sap30O88574 220 aa7.49□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Sumo2P61957 95 aaKnown RBP7.49□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Sdhaf1Q3U276 118 aa7.49□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Ly6g5bQ8K1T4 194 aa7.49□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 TdhQ8K3F7 373 aa7.49□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 AamdcQ8R0P4 122 aa7.49□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Dynlrb2Q9DAJ5 96 aa7.49□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Mrps12O35680 139 aa7.49□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 P01748 117 aa7.49□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Lrcol1Q3URS3 161 aa7.49□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Foxi1Q922I5 372 aa7.49□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Dpm3Q9D1Q4 92 aa7.49□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Pgpep1Q9ESW8 209 aa7.49□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Csmd1Q923L3 3564 aa7.49□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Ovol3D3YYM0 189 aa7.49□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 B430305J03RikQ8BQQ8 176 aa7.49□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Chchd5Q9CQP3 110 aa7.49□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Gm11444F6QMA6 170 aa7.48□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Gm9513B3GLJ6 99 aa7.48□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Gm5294J3QP53 216 aa7.48□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Hist1h1tQ07133 208 aa7.48□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 5730522E02RikQ5SP45 163 aa7.48□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 E130116L18RikQ8BMV6 101 aa7.48□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 PmvkQ9D1G2 192 aa7.48□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 NbeaQ9EPN1 2936 aa7.48□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 BC067074F6RXI4 2391 aa7.48□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Vsig4F6TUL9 280 aa7.47□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Defa26Q3L180 93 aa7.47□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Ighv5-8A0A075B676 92 aa7.47□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Ighv1-23A0A0A6YVW3 117 aa7.47□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 P01811 117 aa7.47□□□□□ -1.21
Pcdh1-201ENSMUST00000057185 Cd69P37217 199 aa7.47□□□□□ -1.21
Retrieved 100 of 22,080 RNA–protein pairs in 48.6 ms