RNA–Protein interactions for RNA: ENST00000641949.1

MFSD8-256, Transcript of major facilitator superfamily domain containing 8, human

BASIC

Gene MFSD8, Length 1,640 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MFSD8-256	ENST00000641949		P0C880	135 aa		3.26	□□□□□ -1.89
MFSD8-256	ENST00000641949	USH2A	O75445	5202 aa		3.26	□□□□□ -1.89
MFSD8-256	ENST00000641949	SPRR2G	Q9BYE4	73 aa		3.26	□□□□□ -1.89
MFSD8-256	ENST00000641949	SPINT4	Q6UDR6	99 aa		3.24	□□□□□ -1.89
MFSD8-256	ENST00000641949		R4GN34	69 aa		3.22	□□□□□ -1.89
MFSD8-256	ENST00000641949	SYNE2	Q8WXH0	6885 aa	Known RBP	3.2	□□□□□ -1.9
MFSD8-256	ENST00000641949	KRTAP19-8	Q3LI54	63 aa		3.19	□□□□□ -1.9
MFSD8-256	ENST00000641949	KRTAP19-6	Q3LI70	58 aa		3.19	□□□□□ -1.9
MFSD8-256	ENST00000641949		M0QZ58	72 aa		3.18	□□□□□ -1.9
MFSD8-256	ENST00000641949	MT1B	P07438	61 aa		3.17	□□□□□ -1.9
MFSD8-256	ENST00000641949	NDUFAF8	A1L188	74 aa		3.15	□□□□□ -1.9
MFSD8-256	ENST00000641949	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.15	□□□□□ -1.9
MFSD8-256	ENST00000641949	NEB	P20929	6669 aa		3.15	□□□□□ -1.91
MFSD8-256	ENST00000641949	PLAC4	Q8WY50	150 aa		3.15	□□□□□ -1.91
MFSD8-256	ENST00000641949	LCE3E	Q5T5B0	92 aa		3.12	□□□□□ -1.91
MFSD8-256	ENST00000641949	MACF1	Q9UPN3	7388 aa	Known RBP	3.1	□□□□□ -1.91
MFSD8-256	ENST00000641949	LUZP6	Q538Z0	58 aa		3.08	□□□□□ -1.92
MFSD8-256	ENST00000641949	PRO2289	Q9P1D8	64 aa		3.08	□□□□□ -1.92
MFSD8-256	ENST00000641949	KRTAP13-4	Q3LI77	160 aa		3.03	□□□□□ -1.92
MFSD8-256	ENST00000641949	LCE3A	Q5TA76	89 aa		3.03	□□□□□ -1.92
MFSD8-256	ENST00000641949	GPR98	Q8WXG9	6306 aa		3.02	□□□□□ -1.93
MFSD8-256	ENST00000641949	KRTAP20-1	Q3LI63	56 aa		3.02	□□□□□ -1.93
MFSD8-256	ENST00000641949	MT1X	P80297	61 aa		3.01	□□□□□ -1.93
MFSD8-256	ENST00000641949		A0A0D9SG42	100 aa		3.01	□□□□□ -1.93
MFSD8-256	ENST00000641949	CAMK2N1	Q7Z7J9	78 aa		2.99	□□□□□ -1.93
MFSD8-256	ENST00000641949	C10orf95	Q9H7T3	257 aa		2.99	□□□□□ -1.93
MFSD8-256	ENST00000641949	KRTAP12-2	P59991	146 aa		2.97	□□□□□ -1.93
MFSD8-256	ENST00000641949	KRTAP12-1	P59990	96 aa		2.97	□□□□□ -1.93
MFSD8-256	ENST00000641949	KRTAP6-3	Q3LI67	103 aa		2.97	□□□□□ -1.93
MFSD8-256	ENST00000641949	PP632	Q6XCG6	107 aa		2.97	□□□□□ -1.93
MFSD8-256	ENST00000641949	MUC12	Q9UKN1	5478 aa		2.91	□□□□□ -1.94
MFSD8-256	ENST00000641949	KRTAP8-1	Q8IUC2	63 aa		2.89	□□□□□ -1.95
MFSD8-256	ENST00000641949	KMT2D	O14686	5537 aa		2.86	□□□□□ -1.95
MFSD8-256	ENST00000641949	SPRR2F	Q96RM1	72 aa		2.85	□□□□□ -1.95
MFSD8-256	ENST00000641949	KRTAP5-5	Q701N2	237 aa	Predicted RBP	2.82	□□□□□ -1.96
MFSD8-256	ENST00000641949	MDN1	Q9NU22	5596 aa		2.79	□□□□□ -1.96
MFSD8-256	ENST00000641949	KRTAP2-3	P0C7H8	128 aa		2.79	□□□□□ -1.96
MFSD8-256	ENST00000641949	KRTAP2-4	Q9BYR9	128 aa		2.79	□□□□□ -1.96
MFSD8-256	ENST00000641949	TNP1	P09430	55 aa		2.78	□□□□□ -1.96
MFSD8-256	ENST00000641949	SPRR5	A0A1B0GTR4	108 aa		2.77	□□□□□ -1.97
MFSD8-256	ENST00000641949	SPRR2E	P22531	72 aa		2.77	□□□□□ -1.97
MFSD8-256	ENST00000641949	SPRR2B	P35325	72 aa		2.77	□□□□□ -1.97
MFSD8-256	ENST00000641949	SPRR2A	P35326	72 aa		2.77	□□□□□ -1.97
MFSD8-256	ENST00000641949	INE1	O15225	51 aa		2.75	□□□□□ -1.97
MFSD8-256	ENST00000641949	LCE1C	Q5T751	118 aa		2.71	□□□□□ -1.98
MFSD8-256	ENST00000641949	LCE1B	Q5T7P3	118 aa		2.71	□□□□□ -1.98
MFSD8-256	ENST00000641949	KRTAP19-7	Q3SYF9	63 aa		2.68	□□□□□ -1.98
MFSD8-256	ENST00000641949	SPRR2D	P22532	72 aa		2.68	□□□□□ -1.98
MFSD8-256	ENST00000641949	KRTAP19-5	Q3LI72	72 aa		2.68	□□□□□ -1.98
MFSD8-256	ENST00000641949	MT1E	P04732	61 aa		2.66	□□□□□ -1.98
MFSD8-256	ENST00000641949	KRTAP2-1	Q9BYU5	128 aa		2.66	□□□□□ -1.98
MFSD8-256	ENST00000641949	KRTAP19-3	Q7Z4W3	81 aa		2.63	□□□□□ -1.99
MFSD8-256	ENST00000641949	MT1G	P13640	62 aa		2.6	□□□□□ -1.99
MFSD8-256	ENST00000641949	KRTAP12-3	P60328	96 aa		2.6	□□□□□ -1.99
MFSD8-256	ENST00000641949	DST	Q03001	7570 aa	Known RBP	2.58	□□□□□ -2
MFSD8-256	ENST00000641949	MT1L	Q93083	61 aa		2.57	□□□□□ -2
MFSD8-256	ENST00000641949	AHNAK2	Q8IVF2	5795 aa		2.54	□□□□□ -2
MFSD8-256	ENST00000641949	MT1M	Q8N339	61 aa		2.53	□□□□□ -2
MFSD8-256	ENST00000641949	LCE3D	Q9BYE3	92 aa		2.45	□□□□□ -2.02
MFSD8-256	ENST00000641949	KRTAP5-10	Q6L8G5	202 aa		2.42	□□□□□ -2.02
MFSD8-256	ENST00000641949	KRTAP5-7	Q6L8G8	165 aa		2.42	□□□□□ -2.02
MFSD8-256	ENST00000641949	MUC19	Q7Z5P9	8384 aa		2.41	□□□□□ -2.02
MFSD8-256	ENST00000641949	MT4	P47944	62 aa		2.34	□□□□□ -2.04
MFSD8-256	ENST00000641949	AHNAK	Q09666	5890 aa	Known RBP	2.31	□□□□□ -2.04
MFSD8-256	ENST00000641949	MUC5B	Q9HC84	5762 aa	Predicted RBP	2.27	□□□□□ -2.05
MFSD8-256	ENST00000641949	KRTAP12-4	P60329	112 aa		2.26	□□□□□ -2.05
MFSD8-256	ENST00000641949	KRTAP20-2	Q3LI61	65 aa		2.2	□□□□□ -2.06
MFSD8-256	ENST00000641949	MT1A	P04731	61 aa		2.18	□□□□□ -2.06
MFSD8-256	ENST00000641949	SYNE1	Q8NF91	8797 aa	Known RBP	2.18	□□□□□ -2.06
MFSD8-256	ENST00000641949	KRTAP6-1	Q3LI64	71 aa		2.17	□□□□□ -2.06
MFSD8-256	ENST00000641949	MUC5AC	P98088	5654 aa		2.15	□□□□□ -2.06
MFSD8-256	ENST00000641949	KRTAP6-2	Q3LI66	62 aa		2.06	□□□□□ -2.08
MFSD8-256	ENST00000641949	KRTAP21-2	Q3LI59	83 aa		2.04	□□□□□ -2.08
MFSD8-256	ENST00000641949	PRM1	P04553	51 aa		1.7	□□□□□ -2.14
MFSD8-256	ENST00000641949	PHGR1	C9JFL3	82 aa		1.41	□□□□□ -2.18
MFSD8-256	ENST00000641949	KRTAP21-1	Q3LI58	79 aa		1.17	□□□□□ -2.22
MFSD8-256	ENST00000641949	MUC16	Q8WXI7	14507 aa		0.97	□□□□□ -2.25

Retrieved 77 of 20,778 RNA–protein pairs in 111.7 ms