RNA–Protein interactions for RNA: ENST00000641811.1

PHGDH-227, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,031 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-227ENST00000641811 KRTAP19-5Q3LI72 72 aa6.39□□□□□ -1.39
PHGDH-227ENST00000641811 LCE3BQ5TA77 95 aa6.38□□□□□ -1.39
PHGDH-227ENST00000641811 TNP1P09430 55 aa6.35□□□□□ -1.39
PHGDH-227ENST00000641811 LCE5AQ5TCM9 118 aa6.34□□□□□ -1.39
PHGDH-227ENST00000641811 KRTAP19-3Q7Z4W3 81 aa6.34□□□□□ -1.39
PHGDH-227ENST00000641811 LCE3AQ5TA76 89 aa6.32□□□□□ -1.4
PHGDH-227ENST00000641811 MT1GP13640 62 aa6.19□□□□□ -1.42
PHGDH-227ENST00000641811 MT1LQ93083 61 aa6.18□□□□□ -1.42
PHGDH-227ENST00000641811 DSTQ03001 7570 aaKnown RBP6.13□□□□□ -1.43
PHGDH-227ENST00000641811 PMAIP1Q13794 54 aa6.12□□□□□ -1.43
PHGDH-227ENST00000641811 PP632Q6XCG6 107 aa6.12□□□□□ -1.43
PHGDH-227ENST00000641811 MT1MQ8N339 61 aa6.12□□□□□ -1.43
PHGDH-227ENST00000641811 ROMO1P60602 79 aa6.06□□□□□ -1.44
PHGDH-227ENST00000641811 KRTAP25-1Q3LHN0 102 aa6.06□□□□□ -1.44
PHGDH-227ENST00000641811 KRTAP12-3P60328 96 aa6.05□□□□□ -1.44
PHGDH-227ENST00000641811 KRTAP4-3Q9BYR4 195 aa6.03□□□□□ -1.44
PHGDH-227ENST00000641811 KTN1-AS1Q86SY8 53 aa5.95□□□□□ -1.46
PHGDH-227ENST00000641811 KRTAP4-9Q9BYQ8 210 aa5.94□□□□□ -1.46
PHGDH-227ENST00000641811 KRTAP4-7Q9BYR0 210 aa5.94□□□□□ -1.46
PHGDH-227ENST00000641811 GPR98Q8WXG9 6306 aa5.83□□□□□ -1.48
PHGDH-227ENST00000641811 KRTAP23-1A1A580 65 aa5.81□□□□□ -1.48
PHGDH-227ENST00000641811 LCE1DQ5T752 114 aa5.8□□□□□ -1.48
PHGDH-227ENST00000641811 LCE4AQ5TA78 99 aa5.79□□□□□ -1.48
PHGDH-227ENST00000641811 MT4P47944 62 aa5.76□□□□□ -1.49
PHGDH-227ENST00000641811 KRTAP5-4Q6L8H1 288 aa5.73□□□□□ -1.49
PHGDH-227ENST00000641811 KRTAP15-1Q3LI76 137 aa5.7□□□□□ -1.5
PHGDH-227ENST00000641811 HMCN1Q96RW7 5635 aa5.69□□□□□ -1.5
PHGDH-227ENST00000641811 PRAC1Q96KF2 57 aa5.66□□□□□ -1.5
PHGDH-227ENST00000641811 KRTAP19-4Q3LI73 84 aa5.63□□□□□ -1.51
PHGDH-227ENST00000641811 KRTAP4-6Q9BYQ5 205 aa5.62□□□□□ -1.51
PHGDH-227ENST00000641811 LOC100996750A0A140TA64 210 aa5.61□□□□□ -1.51
PHGDH-227ENST00000641811 LCE3CQ5T5A8 94 aa5.59□□□□□ -1.51
PHGDH-227ENST00000641811 KRTAP5-5Q701N2 237 aaPredicted RBP5.59□□□□□ -1.51
PHGDH-227ENST00000641811 AHNAK2Q8IVF2 5795 aa5.43□□□□□ -1.54
PHGDH-227ENST00000641811 KRTAP20-2Q3LI61 65 aa5.41□□□□□ -1.54
PHGDH-227ENST00000641811 KRTAP12-4P60329 112 aa5.39□□□□□ -1.55
PHGDH-227ENST00000641811 SPRR5A0A1B0GTR4 108 aa5.37□□□□□ -1.55
PHGDH-227ENST00000641811 KRTAP5-10Q6L8G5 202 aa5.35□□□□□ -1.55
PHGDH-227ENST00000641811 KRTAP9-6A8MVA2 160 aa5.32□□□□□ -1.56
PHGDH-227ENST00000641811 SYNE1Q8NF91 8797 aaKnown RBP5.27□□□□□ -1.57
PHGDH-227ENST00000641811 KRTAP5-3Q6L8H2 238 aa5.25□□□□□ -1.57
PHGDH-227ENST00000641811 MT1AP04731 61 aa5.24□□□□□ -1.57
PHGDH-227ENST00000641811 KRTAP6-1Q3LI64 71 aa5.24□□□□□ -1.57
PHGDH-227ENST00000641811 H3BS24 57 aa5.22□□□□□ -1.57
PHGDH-227ENST00000641811 KRTAP5-7Q6L8G8 165 aa5.16□□□□□ -1.58
PHGDH-227ENST00000641811 KRTAP9-4Q9BYQ2 154 aa5.06□□□□□ -1.6
PHGDH-227ENST00000641811 KRTAP5-2Q701N4 177 aa5.04□□□□□ -1.6
PHGDH-227ENST00000641811 KRTAP6-2Q3LI66 62 aa4.98□□□□□ -1.61
PHGDH-227ENST00000641811 KRTAP4-11Q9BYQ6 195 aa4.9□□□□□ -1.63
PHGDH-227ENST00000641811 MT3P25713 68 aa4.78□□□□□ -1.64
PHGDH-227ENST00000641811 LUZP6Q538Z0 58 aa4.76□□□□□ -1.65
PHGDH-227ENST00000641811 KRTAP5-8O75690 187 aa4.73□□□□□ -1.65
PHGDH-227ENST00000641811 OBSCNQ5VST9 7968 aa4.69□□□□□ -1.66
PHGDH-227ENST00000641811 NDUFAF8A1L188 74 aa4.67□□□□□ -1.66
PHGDH-227ENST00000641811 KRTAP4-12Q9BQ66 201 aa4.57□□□□□ -1.68
PHGDH-227ENST00000641811 KRTAP5-1Q6L8H4 278 aa4.51□□□□□ -1.69
PHGDH-227ENST00000641811 MUC5ACP98088 5654 aa4.48□□□□□ -1.69
PHGDH-227ENST00000641811 AHNAKQ09666 5890 aaKnown RBP4.47□□□□□ -1.69
PHGDH-227ENST00000641811 MUC5BQ9HC84 5762 aaPredicted RBP4.45□□□□□ -1.7
PHGDH-227ENST00000641811 KRTAP9-9Q9BYP9 154 aa4.44□□□□□ -1.7
PHGDH-227ENST00000641811 A0A0A0MQY5 61 aa4.36□□□□□ -1.71
PHGDH-227ENST00000641811 LCE1EQ5T753 118 aa4.34□□□□□ -1.71
PHGDH-227ENST00000641811 LCE1BQ5T7P3 118 aa4.13□□□□□ -1.75
PHGDH-227ENST00000641811 KRTAP4-2Q9BYR5 136 aa4.13□□□□□ -1.75
PHGDH-227ENST00000641811 LCE3DQ9BYE3 92 aa4.06□□□□□ -1.76
PHGDH-227ENST00000641811 LCE1CQ5T751 118 aa4.03□□□□□ -1.76
PHGDH-227ENST00000641811 INE1O15225 51 aa4.01□□□□□ -1.77
PHGDH-227ENST00000641811 LCE3EQ5T5B0 92 aa3.83□□□□□ -1.8
PHGDH-227ENST00000641811 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.68□□□□□ -1.82
PHGDH-227ENST00000641811 KRTAP5-11Q6L8G4 156 aa3.64□□□□□ -1.83
PHGDH-227ENST00000641811 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
PHGDH-227ENST00000641811 KRTAP21-2Q3LI59 83 aa3.44□□□□□ -1.86
PHGDH-227ENST00000641811 KRTAP4-4Q9BYR3 166 aa3.17□□□□□ -1.9
PHGDH-227ENST00000641811 PHGR1C9JFL3 82 aa3.15□□□□□ -1.91
PHGDH-227ENST00000641811 PRM1P04553 51 aa3.11□□□□□ -1.91
PHGDH-227ENST00000641811 MUC19Q7Z5P9 8384 aa2.87□□□□□ -1.95
PHGDH-227ENST00000641811 KRTAP21-1Q3LI58 79 aa2.35□□□□□ -2.03
PHGDH-227ENST00000641811 MUC16Q8WXI7 14507 aa2.04□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 5.6 ms