RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 SPRR2EP22531 72 aa4.79□□□□□ -1.64
PHGDH-220ENST00000641570 SPRR2BP35325 72 aa4.79□□□□□ -1.64
PHGDH-220ENST00000641570 SPRR2AP35326 72 aa4.79□□□□□ -1.64
PHGDH-220ENST00000641570 NEBP20929 6669 aa4.77□□□□□ -1.65
PHGDH-220ENST00000641570 KRTAP19-7Q3SYF9 63 aa4.76□□□□□ -1.65
PHGDH-220ENST00000641570 MT1EP04732 61 aa4.75□□□□□ -1.65
PHGDH-220ENST00000641570 KTN1-AS1Q86SY8 53 aa4.75□□□□□ -1.65
PHGDH-220ENST00000641570 MUC12Q9UKN1 5478 aa4.71□□□□□ -1.66
PHGDH-220ENST00000641570 PRAC1Q96KF2 57 aa4.69□□□□□ -1.66
PHGDH-220ENST00000641570 KRTAP20-1Q3LI63 56 aa4.67□□□□□ -1.66
PHGDH-220ENST00000641570 MDN1Q9NU22 5596 aa4.67□□□□□ -1.66
PHGDH-220ENST00000641570 LCE1AQ5T7P2 110 aa4.66□□□□□ -1.66
PHGDH-220ENST00000641570 KRTAP19-3Q7Z4W3 81 aa4.66□□□□□ -1.66
PHGDH-220ENST00000641570 LCE1DQ5T752 114 aa4.64□□□□□ -1.67
PHGDH-220ENST00000641570 SPRR2DP22532 72 aa4.63□□□□□ -1.67
PHGDH-220ENST00000641570 KRTAP15-1Q3LI76 137 aa4.63□□□□□ -1.67
PHGDH-220ENST00000641570 MT1LQ93083 61 aa4.61□□□□□ -1.67
PHGDH-220ENST00000641570 MT1GP13640 62 aa4.6□□□□□ -1.67
PHGDH-220ENST00000641570 H3BS24 57 aa4.59□□□□□ -1.67
PHGDH-220ENST00000641570 KRTAP4-7Q9BYR0 210 aa4.59□□□□□ -1.67
PHGDH-220ENST00000641570 KRTAP19-4Q3LI73 84 aa4.57□□□□□ -1.68
PHGDH-220ENST00000641570 KRTAP2-3P0C7H8 128 aa4.55□□□□□ -1.68
PHGDH-220ENST00000641570 LCE4AQ5TA78 99 aa4.55□□□□□ -1.68
PHGDH-220ENST00000641570 LCE5AQ5TCM9 118 aa4.55□□□□□ -1.68
PHGDH-220ENST00000641570 KRTAP2-4Q9BYR9 128 aa4.55□□□□□ -1.68
PHGDH-220ENST00000641570 MT1MQ8N339 61 aa4.5□□□□□ -1.69
PHGDH-220ENST00000641570 KRTAP4-9Q9BYQ8 210 aa4.5□□□□□ -1.69
PHGDH-220ENST00000641570 LCE3CQ5T5A8 94 aa4.44□□□□□ -1.7
PHGDH-220ENST00000641570 KRTAP2-2Q9BYT5 123 aa4.4□□□□□ -1.71
PHGDH-220ENST00000641570 KRTAP2-1Q9BYU5 128 aa4.4□□□□□ -1.71
PHGDH-220ENST00000641570 KRTAP4-2Q9BYR5 136 aa4.39□□□□□ -1.71
PHGDH-220ENST00000641570 KRTAP4-11Q9BYQ6 195 aa4.35□□□□□ -1.71
PHGDH-220ENST00000641570 KRTAP4-3Q9BYR4 195 aa4.32□□□□□ -1.72
PHGDH-220ENST00000641570 GPR98Q8WXG9 6306 aa4.19□□□□□ -1.74
PHGDH-220ENST00000641570 DSTQ03001 7570 aaKnown RBP4.19□□□□□ -1.74
PHGDH-220ENST00000641570 LUZP6Q538Z0 58 aa4.09□□□□□ -1.75
PHGDH-220ENST00000641570 SPRR5A0A1B0GTR4 108 aa4.06□□□□□ -1.76
PHGDH-220ENST00000641570 KRTAP9-6A8MVA2 160 aa4.04□□□□□ -1.76
PHGDH-220ENST00000641570 KRTAP5-5Q701N2 237 aaPredicted RBP4.01□□□□□ -1.77
PHGDH-220ENST00000641570 MT4P47944 62 aa4□□□□□ -1.77
PHGDH-220ENST00000641570 KRTAP12-4P60329 112 aa3.99□□□□□ -1.77
PHGDH-220ENST00000641570 KRTAP5-4Q6L8H1 288 aa3.97□□□□□ -1.77
PHGDH-220ENST00000641570 MT1AP04731 61 aa3.95□□□□□ -1.78
PHGDH-220ENST00000641570 KRTAP5-3Q6L8H2 238 aa3.87□□□□□ -1.79
PHGDH-220ENST00000641570 KRTAP6-1Q3LI64 71 aa3.86□□□□□ -1.79
PHGDH-220ENST00000641570 HMCN1Q96RW7 5635 aa3.81□□□□□ -1.8
PHGDH-220ENST00000641570 KRTAP20-2Q3LI61 65 aa3.78□□□□□ -1.8
PHGDH-220ENST00000641570 SYNE1Q8NF91 8797 aaKnown RBP3.7□□□□□ -1.82
PHGDH-220ENST00000641570 AHNAK2Q8IVF2 5795 aa3.69□□□□□ -1.82
PHGDH-220ENST00000641570 MT3P25713 68 aa3.65□□□□□ -1.83
PHGDH-220ENST00000641570 NDUFAF8A1L188 74 aa3.64□□□□□ -1.83
PHGDH-220ENST00000641570 KRTAP6-2Q3LI66 62 aa3.64□□□□□ -1.83
PHGDH-220ENST00000641570 KRTAP5-10Q6L8G5 202 aa3.62□□□□□ -1.83
PHGDH-220ENST00000641570 KRTAP5-2Q701N4 177 aa3.54□□□□□ -1.84
PHGDH-220ENST00000641570 KRTAP5-7Q6L8G8 165 aa3.51□□□□□ -1.85
PHGDH-220ENST00000641570 LCE3DQ9BYE3 92 aa3.33□□□□□ -1.88
PHGDH-220ENST00000641570 A0A0A0MQY5 61 aa3.26□□□□□ -1.89
PHGDH-220ENST00000641570 AHNAKQ09666 5890 aaKnown RBP3.24□□□□□ -1.89
PHGDH-220ENST00000641570 LCE3EQ5T5B0 92 aa3.2□□□□□ -1.9
PHGDH-220ENST00000641570 KRTAP5-8O75690 187 aa3.18□□□□□ -1.9
PHGDH-220ENST00000641570 LCE1EQ5T753 118 aa3.18□□□□□ -1.9
PHGDH-220ENST00000641570 OBSCNQ5VST9 7968 aa3.12□□□□□ -1.91
PHGDH-220ENST00000641570 MUC5BQ9HC84 5762 aaPredicted RBP3.11□□□□□ -1.91
PHGDH-220ENST00000641570 KRTAP5-1Q6L8H4 278 aa3.09□□□□□ -1.91
PHGDH-220ENST00000641570 MUC5ACP98088 5654 aa3.09□□□□□ -1.91
PHGDH-220ENST00000641570 INE1O15225 51 aa3.05□□□□□ -1.92
PHGDH-220ENST00000641570 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
PHGDH-220ENST00000641570 LCE1CQ5T751 118 aa2.95□□□□□ -1.94
PHGDH-220ENST00000641570 KRTAP5-11Q6L8G4 156 aa2.93□□□□□ -1.94
PHGDH-220ENST00000641570 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.92□□□□□ -1.94
PHGDH-220ENST00000641570 PRM1P04553 51 aa2.65□□□□□ -1.99
PHGDH-220ENST00000641570 LCE1FQ5T754 118 aa2.5□□□□□ -2.01
PHGDH-220ENST00000641570 KRTAP21-2Q3LI59 83 aa2.49□□□□□ -2.01
PHGDH-220ENST00000641570 KRTAP4-4Q9BYR3 166 aa2.44□□□□□ -2.02
PHGDH-220ENST00000641570 PHGR1C9JFL3 82 aa2.24□□□□□ -2.05
PHGDH-220ENST00000641570 MUC19Q7Z5P9 8384 aa1.87□□□□□ -2.11
PHGDH-220ENST00000641570 KRTAP21-1Q3LI58 79 aa1.64□□□□□ -2.15
PHGDH-220ENST00000641570 MUC16Q8WXI7 14507 aa1.36□□□□□ -2.19
Retrieved 78 of 20,778 RNA–protein pairs in 222.6 ms