RNA–Protein interactions for RNA: ENST00000641247.1

PHGDH-212, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 710 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-212ENST00000641247 KRTAP12-1P59990 96 aa4.17□□□□□ -1.74
PHGDH-212ENST00000641247 KRTAP13-4Q3LI77 160 aa4.17□□□□□ -1.74
PHGDH-212ENST00000641247 KRTAP8-1Q8IUC2 63 aa4.16□□□□□ -1.74
PHGDH-212ENST00000641247 KRTAP12-2P59991 146 aa4.14□□□□□ -1.75
PHGDH-212ENST00000641247 KRTAP4-8A0A0G2JLE6 195 aa4.12□□□□□ -1.75
PHGDH-212ENST00000641247 KRTAP4-8Q9BYQ9 185 aa4.12□□□□□ -1.75
PHGDH-212ENST00000641247 KRTAP4-9Q9BYQ8 210 aa4.09□□□□□ -1.75
PHGDH-212ENST00000641247 MT1XP80297 61 aa4.08□□□□□ -1.76
PHGDH-212ENST00000641247 R4GN34 69 aa4.08□□□□□ -1.76
PHGDH-212ENST00000641247 DSTQ03001 7570 aaKnown RBP4.03□□□□□ -1.76
PHGDH-212ENST00000641247 KRTAP23-1A1A580 65 aa4.03□□□□□ -1.76
PHGDH-212ENST00000641247 PRO2289Q9P1D8 64 aa3.95□□□□□ -1.78
PHGDH-212ENST00000641247 INE1O15225 51 aa3.91□□□□□ -1.78
PHGDH-212ENST00000641247 KRTAP10-7P60409 375 aaPredicted RBP3.91□□□□□ -1.78
PHGDH-212ENST00000641247 LCE1DQ5T752 114 aa3.9□□□□□ -1.79
PHGDH-212ENST00000641247 KRTAP5-10Q6L8G5 202 aa3.87□□□□□ -1.79
PHGDH-212ENST00000641247 TNP1P09430 55 aa3.84□□□□□ -1.79
PHGDH-212ENST00000641247 KRTAP10-12P60413 245 aa3.84□□□□□ -1.79
PHGDH-212ENST00000641247 SPRR5A0A1B0GTR4 108 aa3.83□□□□□ -1.8
PHGDH-212ENST00000641247 HMCN1Q96RW7 5635 aa3.82□□□□□ -1.8
PHGDH-212ENST00000641247 MT4P47944 62 aa3.79□□□□□ -1.8
PHGDH-212ENST00000641247 LCE5AQ5TCM9 118 aa3.77□□□□□ -1.81
PHGDH-212ENST00000641247 AHNAK2Q8IVF2 5795 aa3.77□□□□□ -1.81
PHGDH-212ENST00000641247 KRTAP5-7Q6L8G8 165 aa3.75□□□□□ -1.81
PHGDH-212ENST00000641247 LCE4AQ5TA78 99 aa3.7□□□□□ -1.82
PHGDH-212ENST00000641247 KRTAP19-3Q7Z4W3 81 aa3.68□□□□□ -1.82
PHGDH-212ENST00000641247 KRTAP4-6Q9BYQ5 205 aa3.68□□□□□ -1.82
PHGDH-212ENST00000641247 KRTAP19-7Q3SYF9 63 aa3.67□□□□□ -1.82
PHGDH-212ENST00000641247 KRTAP5-3Q6L8H2 238 aa3.66□□□□□ -1.82
PHGDH-212ENST00000641247 MT1EP04732 61 aa3.63□□□□□ -1.83
PHGDH-212ENST00000641247 KRTAP5-4Q6L8H1 288 aa3.61□□□□□ -1.83
PHGDH-212ENST00000641247 MT1GP13640 62 aa3.52□□□□□ -1.85
PHGDH-212ENST00000641247 KRTAP4-3Q9BYR4 195 aa3.5□□□□□ -1.85
PHGDH-212ENST00000641247 MT1MQ8N339 61 aa3.49□□□□□ -1.85
PHGDH-212ENST00000641247 LCE3AQ5TA76 89 aa3.47□□□□□ -1.85
PHGDH-212ENST00000641247 KRTAP20-2Q3LI61 65 aa3.43□□□□□ -1.86
PHGDH-212ENST00000641247 KRTAP19-5Q3LI72 72 aa3.43□□□□□ -1.86
PHGDH-212ENST00000641247 MT1LQ93083 61 aa3.39□□□□□ -1.87
PHGDH-212ENST00000641247 KRTAP12-3P60328 96 aa3.34□□□□□ -1.87
PHGDH-212ENST00000641247 KRTAP19-4Q3LI73 84 aa3.3□□□□□ -1.88
PHGDH-212ENST00000641247 SYNE1Q8NF91 8797 aaKnown RBP3.3□□□□□ -1.88
PHGDH-212ENST00000641247 KRTAP4-7Q9BYR0 210 aa3.29□□□□□ -1.88
PHGDH-212ENST00000641247 KRTAP5-5Q701N2 237 aaPredicted RBP3.27□□□□□ -1.89
PHGDH-212ENST00000641247 KRTAP4-11Q9BYQ6 195 aa3.24□□□□□ -1.89
PHGDH-212ENST00000641247 MUC5ACP98088 5654 aa3.22□□□□□ -1.89
PHGDH-212ENST00000641247 KRTAP5-8O75690 187 aa3.2□□□□□ -1.9
PHGDH-212ENST00000641247 KRTAP12-4P60329 112 aa3.2□□□□□ -1.9
PHGDH-212ENST00000641247 AHNAKQ09666 5890 aaKnown RBP3.19□□□□□ -1.9
PHGDH-212ENST00000641247 MUC5BQ9HC84 5762 aaPredicted RBP3.18□□□□□ -1.9
PHGDH-212ENST00000641247 LOC100996750A0A140TA64 210 aa3.13□□□□□ -1.91
PHGDH-212ENST00000641247 LCE3CQ5T5A8 94 aa3.12□□□□□ -1.91
PHGDH-212ENST00000641247 KRTAP5-2Q701N4 177 aa3.07□□□□□ -1.92
PHGDH-212ENST00000641247 KRTAP9-9Q9BYP9 154 aa3.02□□□□□ -1.93
PHGDH-212ENST00000641247 KRTAP9-6A8MVA2 160 aa2.94□□□□□ -1.94
PHGDH-212ENST00000641247 OBSCNQ5VST9 7968 aa2.92□□□□□ -1.94
PHGDH-212ENST00000641247 KRTAP6-1Q3LI64 71 aa2.92□□□□□ -1.94
PHGDH-212ENST00000641247 KRTAP5-1Q6L8H4 278 aa2.87□□□□□ -1.95
PHGDH-212ENST00000641247 KRTAP6-2Q3LI66 62 aa2.86□□□□□ -1.95
PHGDH-212ENST00000641247 MT1AP04731 61 aa2.85□□□□□ -1.95
PHGDH-212ENST00000641247 KRTAP9-4Q9BYQ2 154 aa2.83□□□□□ -1.96
PHGDH-212ENST00000641247 MT3P25713 68 aa2.61□□□□□ -1.99
PHGDH-212ENST00000641247 LCE3EQ5T5B0 92 aa2.51□□□□□ -2.01
PHGDH-212ENST00000641247 LCE1EQ5T753 118 aa2.5□□□□□ -2.01
PHGDH-212ENST00000641247 LCE3DQ9BYE3 92 aa2.48□□□□□ -2.01
PHGDH-212ENST00000641247 KRTAP4-2Q9BYR5 136 aa2.48□□□□□ -2.01
PHGDH-212ENST00000641247 LCE1BQ5T7P3 118 aa2.44□□□□□ -2.02
PHGDH-212ENST00000641247 KRTAP4-12Q9BQ66 201 aa2.44□□□□□ -2.02
PHGDH-212ENST00000641247 PRM1P04553 51 aa2.4□□□□□ -2.03
PHGDH-212ENST00000641247 LCE1CQ5T751 118 aa2.34□□□□□ -2.03
PHGDH-212ENST00000641247 KRTAP5-11Q6L8G4 156 aa2.28□□□□□ -2.04
PHGDH-212ENST00000641247 PHGR1C9JFL3 82 aa2.25□□□□□ -2.05
PHGDH-212ENST00000641247 LCE1FQ5T754 118 aa2.18□□□□□ -2.06
PHGDH-212ENST00000641247 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.07□□□□□ -2.08
PHGDH-212ENST00000641247 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
PHGDH-212ENST00000641247 KRTAP4-4Q9BYR3 166 aa1.87□□□□□ -2.11
PHGDH-212ENST00000641247 MUC19Q7Z5P9 8384 aa1.85□□□□□ -2.11
PHGDH-212ENST00000641247 KRTAP21-1Q3LI58 79 aa1.68□□□□□ -2.14
PHGDH-212ENST00000641247 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 6.2 ms