RNA–Protein interactions for RNA: ENST00000640748.1

ERGIC3-220, Transcript of ERGIC and golgi 3, humanhuman

TSL 5 BASIC

Gene ERGIC3, Length 832 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-220ENST00000640748 KRTAP23-1A1A580 65 aa4.74□□□□□ -1.65
ERGIC3-220ENST00000640748 SPRR2DP22532 72 aa4.74□□□□□ -1.65
ERGIC3-220ENST00000640748 KRTAP4-8Q9BYQ9 185 aa4.74□□□□□ -1.65
ERGIC3-220ENST00000640748 KRTAP10-7P60409 375 aaPredicted RBP4.64□□□□□ -1.67
ERGIC3-220ENST00000640748 LCE3BQ5TA77 95 aa4.64□□□□□ -1.67
ERGIC3-220ENST00000640748 KRTAP10-12P60413 245 aa4.63□□□□□ -1.67
ERGIC3-220ENST00000640748 LCE3AQ5TA76 89 aa4.62□□□□□ -1.67
ERGIC3-220ENST00000640748 GPR98Q8WXG9 6306 aa4.6□□□□□ -1.67
ERGIC3-220ENST00000640748 DSTQ03001 7570 aaKnown RBP4.52□□□□□ -1.69
ERGIC3-220ENST00000640748 KRTAP12-3P60328 96 aa4.44□□□□□ -1.7
ERGIC3-220ENST00000640748 KRTAP4-9Q9BYQ8 210 aa4.41□□□□□ -1.7
ERGIC3-220ENST00000640748 KRTAP19-5Q3LI72 72 aa4.39□□□□□ -1.71
ERGIC3-220ENST00000640748 LCE5AQ5TCM9 118 aa4.39□□□□□ -1.71
ERGIC3-220ENST00000640748 KRTAP15-1Q3LI76 137 aa4.37□□□□□ -1.71
ERGIC3-220ENST00000640748 KRTAP19-7Q3SYF9 63 aa4.36□□□□□ -1.71
ERGIC3-220ENST00000640748 MT1EP04732 61 aa4.32□□□□□ -1.72
ERGIC3-220ENST00000640748 KRTAP19-3Q7Z4W3 81 aa4.32□□□□□ -1.72
ERGIC3-220ENST00000640748 LCE1DQ5T752 114 aa4.28□□□□□ -1.72
ERGIC3-220ENST00000640748 HMCN1Q96RW7 5635 aa4.25□□□□□ -1.73
ERGIC3-220ENST00000640748 SPRR5A0A1B0GTR4 108 aa4.21□□□□□ -1.74
ERGIC3-220ENST00000640748 AHNAK2Q8IVF2 5795 aa4.19□□□□□ -1.74
ERGIC3-220ENST00000640748 KRTAP19-4Q3LI73 84 aa4.19□□□□□ -1.74
ERGIC3-220ENST00000640748 MT4P47944 62 aa4.18□□□□□ -1.74
ERGIC3-220ENST00000640748 MT1GP13640 62 aa4.17□□□□□ -1.74
ERGIC3-220ENST00000640748 LCE4AQ5TA78 99 aa4.17□□□□□ -1.74
ERGIC3-220ENST00000640748 MT1LQ93083 61 aa4.17□□□□□ -1.74
ERGIC3-220ENST00000640748 LCE3CQ5T5A8 94 aa4.15□□□□□ -1.75
ERGIC3-220ENST00000640748 LUZP6Q538Z0 58 aa4.13□□□□□ -1.75
ERGIC3-220ENST00000640748 KRTAP5-10Q6L8G5 202 aa4.12□□□□□ -1.75
ERGIC3-220ENST00000640748 MT1MQ8N339 61 aa4.12□□□□□ -1.75
ERGIC3-220ENST00000640748 KRTAP5-4Q6L8H1 288 aa4.1□□□□□ -1.75
ERGIC3-220ENST00000640748 KRTAP4-6Q9BYQ5 205 aa4.07□□□□□ -1.76
ERGIC3-220ENST00000640748 KRTAP4-3Q9BYR4 195 aa4.07□□□□□ -1.76
ERGIC3-220ENST00000640748 NDUFAF8A1L188 74 aa4.04□□□□□ -1.76
ERGIC3-220ENST00000640748 KRTAP4-7Q9BYR0 210 aa4.01□□□□□ -1.77
ERGIC3-220ENST00000640748 KRTAP5-7Q6L8G8 165 aa3.98□□□□□ -1.77
ERGIC3-220ENST00000640748 KRTAP5-3Q6L8H2 238 aa3.95□□□□□ -1.78
ERGIC3-220ENST00000640748 KRTAP9-6A8MVA2 160 aa3.89□□□□□ -1.79
ERGIC3-220ENST00000640748 KRTAP20-2Q3LI61 65 aa3.87□□□□□ -1.79
ERGIC3-220ENST00000640748 KRTAP5-5Q701N2 237 aaPredicted RBP3.83□□□□□ -1.8
ERGIC3-220ENST00000640748 LOC100996750A0A140TA64 210 aa3.77□□□□□ -1.81
ERGIC3-220ENST00000640748 KRTAP12-4P60329 112 aa3.72□□□□□ -1.81
ERGIC3-220ENST00000640748 SYNE1Q8NF91 8797 aaKnown RBP3.67□□□□□ -1.82
ERGIC3-220ENST00000640748 H3BS24 57 aa3.62□□□□□ -1.83
ERGIC3-220ENST00000640748 A0A0A0MQY5 61 aa3.6□□□□□ -1.83
ERGIC3-220ENST00000640748 KRTAP4-11Q9BYQ6 195 aa3.6□□□□□ -1.83
ERGIC3-220ENST00000640748 MT1AP04731 61 aa3.56□□□□□ -1.84
ERGIC3-220ENST00000640748 KRTAP5-2Q701N4 177 aa3.56□□□□□ -1.84
ERGIC3-220ENST00000640748 AHNAKQ09666 5890 aaKnown RBP3.52□□□□□ -1.85
ERGIC3-220ENST00000640748 MUC5ACP98088 5654 aa3.5□□□□□ -1.85
ERGIC3-220ENST00000640748 KRTAP5-8O75690 187 aa3.5□□□□□ -1.85
ERGIC3-220ENST00000640748 KRTAP6-1Q3LI64 71 aa3.5□□□□□ -1.85
ERGIC3-220ENST00000640748 MUC5BQ9HC84 5762 aaPredicted RBP3.48□□□□□ -1.85
ERGIC3-220ENST00000640748 OBSCNQ5VST9 7968 aa3.38□□□□□ -1.87
ERGIC3-220ENST00000640748 INE1O15225 51 aa3.37□□□□□ -1.87
ERGIC3-220ENST00000640748 KRTAP9-4Q9BYQ2 154 aa3.37□□□□□ -1.87
ERGIC3-220ENST00000640748 KRTAP6-2Q3LI66 62 aa3.36□□□□□ -1.87
ERGIC3-220ENST00000640748 KRTAP9-9Q9BYP9 154 aa3.31□□□□□ -1.88
ERGIC3-220ENST00000640748 KRTAP5-1Q6L8H4 278 aa3.24□□□□□ -1.89
ERGIC3-220ENST00000640748 MT3P25713 68 aa3.22□□□□□ -1.89
ERGIC3-220ENST00000640748 LCE3DQ9BYE3 92 aa3.13□□□□□ -1.91
ERGIC3-220ENST00000640748 LCE3EQ5T5B0 92 aa3.06□□□□□ -1.92
ERGIC3-220ENST00000640748 LCE1EQ5T753 118 aa2.97□□□□□ -1.93
ERGIC3-220ENST00000640748 KRTAP4-2Q9BYR5 136 aa2.87□□□□□ -1.95
ERGIC3-220ENST00000640748 LCE1BQ5T7P3 118 aa2.81□□□□□ -1.96
ERGIC3-220ENST00000640748 LCE1CQ5T751 118 aa2.77□□□□□ -1.97
ERGIC3-220ENST00000640748 PRM1P04553 51 aa2.68□□□□□ -1.98
ERGIC3-220ENST00000640748 KRTAP4-12Q9BQ66 201 aa2.68□□□□□ -1.98
ERGIC3-220ENST00000640748 KRTAP5-11Q6L8G4 156 aa2.56□□□□□ -2
ERGIC3-220ENST00000640748 LCE1FQ5T754 118 aa2.5□□□□□ -2.01
ERGIC3-220ENST00000640748 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.5□□□□□ -2.01
ERGIC3-220ENST00000640748 PHGR1C9JFL3 82 aa2.38□□□□□ -2.03
ERGIC3-220ENST00000640748 KRTAP21-2Q3LI59 83 aa2.3□□□□□ -2.04
ERGIC3-220ENST00000640748 KRTAP4-4Q9BYR3 166 aa2.14□□□□□ -2.07
ERGIC3-220ENST00000640748 MUC19Q7Z5P9 8384 aa2.08□□□□□ -2.08
ERGIC3-220ENST00000640748 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
ERGIC3-220ENST00000640748 MUC16Q8WXI7 14507 aa1.47□□□□□ -2.17
Retrieved 77 of 20,778 RNA–protein pairs in 184.2 ms