RNA–Protein interactions for RNA: ENST00000640458.1

VPS72-207, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 5 BASIC

Gene VPS72, Length 689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-207ENST00000640458 ROMO1P60602 79 aa6.92□□□□□ -1.3
VPS72-207ENST00000640458 LCE1DQ5T752 114 aa6.89□□□□□ -1.31
VPS72-207ENST00000640458 KRTAP25-1Q3LHN0 102 aa6.87□□□□□ -1.31
VPS72-207ENST00000640458 PRO0628Q9UI54 55 aa6.86□□□□□ -1.31
VPS72-207ENST00000640458 PMAIP1Q13794 54 aa6.82□□□□□ -1.32
VPS72-207ENST00000640458 KRTAP19-7Q3SYF9 63 aa6.81□□□□□ -1.32
VPS72-207ENST00000640458 LCE5AQ5TCM9 118 aa6.8□□□□□ -1.32
VPS72-207ENST00000640458 HMCN1Q96RW7 5635 aa6.78□□□□□ -1.32
VPS72-207ENST00000640458 MT4P47944 62 aa6.76□□□□□ -1.33
VPS72-207ENST00000640458 MT1EP04732 61 aa6.74□□□□□ -1.33
VPS72-207ENST00000640458 AHNAK2Q8IVF2 5795 aa6.72□□□□□ -1.33
VPS72-207ENST00000640458 KRTAP5-10Q6L8G5 202 aa6.72□□□□□ -1.33
VPS72-207ENST00000640458 KRTAP19-3Q7Z4W3 81 aa6.69□□□□□ -1.34
VPS72-207ENST00000640458 KRTAP19-5Q3LI72 72 aa6.67□□□□□ -1.34
VPS72-207ENST00000640458 LCE4AQ5TA78 99 aa6.67□□□□□ -1.34
VPS72-207ENST00000640458 KRTAP23-1A1A580 65 aa6.63□□□□□ -1.35
VPS72-207ENST00000640458 LCE3AQ5TA76 89 aa6.62□□□□□ -1.35
VPS72-207ENST00000640458 PP632Q6XCG6 107 aa6.59□□□□□ -1.35
VPS72-207ENST00000640458 KRTAP5-7Q6L8G8 165 aa6.54□□□□□ -1.36
VPS72-207ENST00000640458 MT1GP13640 62 aa6.53□□□□□ -1.36
VPS72-207ENST00000640458 KRTAP4-6Q9BYQ5 205 aa6.48□□□□□ -1.37
VPS72-207ENST00000640458 MT1LQ93083 61 aa6.46□□□□□ -1.38
VPS72-207ENST00000640458 KRTAP5-4Q6L8H1 288 aa6.42□□□□□ -1.38
VPS72-207ENST00000640458 KRTAP5-3Q6L8H2 238 aa6.42□□□□□ -1.38
VPS72-207ENST00000640458 KTN1-AS1Q86SY8 53 aa6.41□□□□□ -1.38
VPS72-207ENST00000640458 MT1MQ8N339 61 aa6.41□□□□□ -1.38
VPS72-207ENST00000640458 SPRR5A0A1B0GTR4 108 aa6.4□□□□□ -1.38
VPS72-207ENST00000640458 KRTAP12-3P60328 96 aa6.4□□□□□ -1.38
VPS72-207ENST00000640458 PRAC1Q96KF2 57 aa6.32□□□□□ -1.4
VPS72-207ENST00000640458 KRTAP4-3Q9BYR4 195 aa6.27□□□□□ -1.41
VPS72-207ENST00000640458 KRTAP15-1Q3LI76 137 aa6.21□□□□□ -1.42
VPS72-207ENST00000640458 KRTAP19-4Q3LI73 84 aa6.16□□□□□ -1.42
VPS72-207ENST00000640458 KRTAP4-7Q9BYR0 210 aa6.14□□□□□ -1.43
VPS72-207ENST00000640458 KRTAP20-2Q3LI61 65 aa6.12□□□□□ -1.43
VPS72-207ENST00000640458 SVIPQ8NHG7 77 aa6.11□□□□□ -1.43
VPS72-207ENST00000640458 LCE3CQ5T5A8 94 aa5.95□□□□□ -1.46
VPS72-207ENST00000640458 KRTAP12-4P60329 112 aa5.91□□□□□ -1.46
VPS72-207ENST00000640458 KRTAP5-5Q701N2 237 aaPredicted RBP5.87□□□□□ -1.47
VPS72-207ENST00000640458 LOC100996750A0A140TA64 210 aa5.81□□□□□ -1.48
VPS72-207ENST00000640458 SYNE1Q8NF91 8797 aaKnown RBP5.76□□□□□ -1.49
VPS72-207ENST00000640458 KRTAP4-11Q9BYQ6 195 aa5.76□□□□□ -1.49
VPS72-207ENST00000640458 AHNAKQ09666 5890 aaKnown RBP5.74□□□□□ -1.49
VPS72-207ENST00000640458 MUC5ACP98088 5654 aa5.7□□□□□ -1.5
VPS72-207ENST00000640458 MUC5BQ9HC84 5762 aaPredicted RBP5.63□□□□□ -1.51
VPS72-207ENST00000640458 KRTAP5-8O75690 187 aa5.61□□□□□ -1.51
VPS72-207ENST00000640458 KRTAP9-6A8MVA2 160 aa5.51□□□□□ -1.53
VPS72-207ENST00000640458 MT1AP04731 61 aa5.51□□□□□ -1.53
VPS72-207ENST00000640458 KRTAP5-2Q701N4 177 aa5.49□□□□□ -1.53
VPS72-207ENST00000640458 KRTAP6-1Q3LI64 71 aa5.46□□□□□ -1.54
VPS72-207ENST00000640458 KRTAP9-9Q9BYP9 154 aa5.43□□□□□ -1.54
VPS72-207ENST00000640458 LUZP6Q538Z0 58 aa5.4□□□□□ -1.54
VPS72-207ENST00000640458 OBSCNQ5VST9 7968 aa5.36□□□□□ -1.55
VPS72-207ENST00000640458 KRTAP9-4Q9BYQ2 154 aa5.32□□□□□ -1.56
VPS72-207ENST00000640458 KRTAP6-2Q3LI66 62 aa5.2□□□□□ -1.58
VPS72-207ENST00000640458 KRTAP5-1Q6L8H4 278 aa5.07□□□□□ -1.6
VPS72-207ENST00000640458 MT3P25713 68 aa5.04□□□□□ -1.6
VPS72-207ENST00000640458 NDUFAF8A1L188 74 aa4.89□□□□□ -1.63
VPS72-207ENST00000640458 LCE1EQ5T753 118 aa4.6□□□□□ -1.67
VPS72-207ENST00000640458 LCE1BQ5T7P3 118 aa4.46□□□□□ -1.7
VPS72-207ENST00000640458 LCE3DQ9BYE3 92 aa4.45□□□□□ -1.7
VPS72-207ENST00000640458 KRTAP4-2Q9BYR5 136 aa4.42□□□□□ -1.7
VPS72-207ENST00000640458 A0A0A0MQY5 61 aa4.34□□□□□ -1.71
VPS72-207ENST00000640458 KRTAP4-12Q9BQ66 201 aa4.32□□□□□ -1.72
VPS72-207ENST00000640458 LCE3EQ5T5B0 92 aa4.29□□□□□ -1.72
VPS72-207ENST00000640458 LCE1CQ5T751 118 aa4.27□□□□□ -1.73
VPS72-207ENST00000640458 INE1O15225 51 aa4.11□□□□□ -1.75
VPS72-207ENST00000640458 KRTAP5-11Q6L8G4 156 aa4.03□□□□□ -1.76
VPS72-207ENST00000640458 PHGR1C9JFL3 82 aa3.98□□□□□ -1.77
VPS72-207ENST00000640458 LCE1FQ5T754 118 aa3.96□□□□□ -1.78
VPS72-207ENST00000640458 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.91□□□□□ -1.78
VPS72-207ENST00000640458 H3BS24 57 aa3.67□□□□□ -1.82
VPS72-207ENST00000640458 KRTAP21-2Q3LI59 83 aa3.61□□□□□ -1.83
VPS72-207ENST00000640458 PRM1P04553 51 aa3.54□□□□□ -1.84
VPS72-207ENST00000640458 KRTAP4-4Q9BYR3 166 aa3.36□□□□□ -1.87
VPS72-207ENST00000640458 MUC19Q7Z5P9 8384 aa3.36□□□□□ -1.87
VPS72-207ENST00000640458 KRTAP21-1Q3LI58 79 aa3.01□□□□□ -1.93
VPS72-207ENST00000640458 MUC16Q8WXI7 14507 aa2.35□□□□□ -2.03
Retrieved 77 of 20,778 RNA–protein pairs in 166.9 ms