RNA–Protein interactions for RNA: ENST00000639447.1

GRN-222, Transcript of granulin precursor, human

TSL 2 BASIC

Gene GRN, Length 1,314 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GRN-222	ENST00000639447		K7ERS5	55 aa		5.45	□□□□□ -1.54
GRN-222	ENST00000639447	DST	Q03001	7570 aa	Known RBP	5.44	□□□□□ -1.54
GRN-222	ENST00000639447	SPINT4	Q6UDR6	99 aa		5.42	□□□□□ -1.54
GRN-222	ENST00000639447		A8MU10	97 aa		5.41	□□□□□ -1.54
GRN-222	ENST00000639447	KRTAP4-9	Q9BYQ8	210 aa		5.4	□□□□□ -1.55
GRN-222	ENST00000639447	KRTAP19-5	Q3LI72	72 aa		5.36	□□□□□ -1.55
GRN-222	ENST00000639447	PP632	Q6XCG6	107 aa		5.34	□□□□□ -1.55
GRN-222	ENST00000639447	MT1G	P13640	62 aa		5.33	□□□□□ -1.56
GRN-222	ENST00000639447	KRTAP12-1	P59990	96 aa		5.33	□□□□□ -1.56
GRN-222	ENST00000639447	LCE1D	Q5T752	114 aa		5.27	□□□□□ -1.57
GRN-222	ENST00000639447	MT1M	Q8N339	61 aa		5.25	□□□□□ -1.57
GRN-222	ENST00000639447	LCE4A	Q5TA78	99 aa		5.24	□□□□□ -1.57
GRN-222	ENST00000639447	MT1L	Q93083	61 aa		5.23	□□□□□ -1.57
GRN-222	ENST00000639447	MT4	P47944	62 aa		5.21	□□□□□ -1.58
GRN-222	ENST00000639447	LCE3A	Q5TA76	89 aa		5.18	□□□□□ -1.58
GRN-222	ENST00000639447	C10orf95	Q9H7T3	257 aa		5.17	□□□□□ -1.58
GRN-222	ENST00000639447	HMCN1	Q96RW7	5635 aa		5.16	□□□□□ -1.58
GRN-222	ENST00000639447	TNP1	P09430	55 aa		5.16	□□□□□ -1.58
GRN-222	ENST00000639447	ROMO1	P60602	79 aa		5.13	□□□□□ -1.59
GRN-222	ENST00000639447	KRTAP4-3	Q9BYR4	195 aa		5.12	□□□□□ -1.59
GRN-222	ENST00000639447	KRTAP5-4	Q6L8H1	288 aa		5.08	□□□□□ -1.6
GRN-222	ENST00000639447	AHNAK2	Q8IVF2	5795 aa		5.08	□□□□□ -1.6
GRN-222	ENST00000639447	PRAC1	Q96KF2	57 aa		5.04	□□□□□ -1.6
GRN-222	ENST00000639447	KRTAP4-6	Q9BYQ5	205 aa		5	□□□□□ -1.61
GRN-222	ENST00000639447	KRTAP12-3	P60328	96 aa		4.97	□□□□□ -1.61
GRN-222	ENST00000639447	KRTAP5-10	Q6L8G5	202 aa		4.97	□□□□□ -1.61
GRN-222	ENST00000639447	KRTAP4-7	Q9BYR0	210 aa		4.94	□□□□□ -1.62
GRN-222	ENST00000639447	KRTAP25-1	Q3LHN0	102 aa		4.93	□□□□□ -1.62
GRN-222	ENST00000639447		H3BS24	57 aa		4.87	□□□□□ -1.63
GRN-222	ENST00000639447	KRTAP20-2	Q3LI61	65 aa		4.83	□□□□□ -1.64
GRN-222	ENST00000639447	KRTAP5-3	Q6L8H2	238 aa		4.83	□□□□□ -1.64
GRN-222	ENST00000639447	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.81	□□□□□ -1.64
GRN-222	ENST00000639447	KRTAP5-7	Q6L8G8	165 aa		4.8	□□□□□ -1.64
GRN-222	ENST00000639447	SPRR5	A0A1B0GTR4	108 aa		4.78	□□□□□ -1.64
GRN-222	ENST00000639447	KRTAP23-1	A1A580	65 aa		4.78	□□□□□ -1.64
GRN-222	ENST00000639447	KRTAP12-4	P60329	112 aa		4.75	□□□□□ -1.65
GRN-222	ENST00000639447	LOC100996750	A0A140TA64	210 aa		4.7	□□□□□ -1.66
GRN-222	ENST00000639447	KRTAP19-4	Q3LI73	84 aa		4.66	□□□□□ -1.66
GRN-222	ENST00000639447	SYNE1	Q8NF91	8797 aa	Known RBP	4.66	□□□□□ -1.66
GRN-222	ENST00000639447	KRTAP15-1	Q3LI76	137 aa		4.59	□□□□□ -1.67
GRN-222	ENST00000639447	LCE3C	Q5T5A8	94 aa		4.54	□□□□□ -1.68
GRN-222	ENST00000639447	MT1A	P04731	61 aa		4.46	□□□□□ -1.69
GRN-222	ENST00000639447	KRTAP4-11	Q9BYQ6	195 aa		4.44	□□□□□ -1.7
GRN-222	ENST00000639447	KRTAP6-1	Q3LI64	71 aa		4.43	□□□□□ -1.7
GRN-222	ENST00000639447	KRTAP5-2	Q701N4	177 aa		4.43	□□□□□ -1.7
GRN-222	ENST00000639447	NDUFAF8	A1L188	74 aa		4.39	□□□□□ -1.71
GRN-222	ENST00000639447	KRTAP9-4	Q9BYQ2	154 aa		4.3	□□□□□ -1.72
GRN-222	ENST00000639447	KRTAP5-8	O75690	187 aa		4.28	□□□□□ -1.72
GRN-222	ENST00000639447	KRTAP9-6	A8MVA2	160 aa		4.27	□□□□□ -1.73
GRN-222	ENST00000639447	KRTAP6-2	Q3LI66	62 aa		4.26	□□□□□ -1.73
GRN-222	ENST00000639447	AHNAK	Q09666	5890 aa	Known RBP	4.25	□□□□□ -1.73
GRN-222	ENST00000639447	LUZP6	Q538Z0	58 aa		4.21	□□□□□ -1.74
GRN-222	ENST00000639447	MUC5AC	P98088	5654 aa		4.2	□□□□□ -1.74
GRN-222	ENST00000639447		A0A0A0MQY5	61 aa		4.17	□□□□□ -1.74
GRN-222	ENST00000639447	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.16	□□□□□ -1.74
GRN-222	ENST00000639447	KRTAP9-9	Q9BYP9	154 aa		4.13	□□□□□ -1.75
GRN-222	ENST00000639447	OBSCN	Q5VST9	7968 aa		4.08	□□□□□ -1.76
GRN-222	ENST00000639447	MT3	P25713	68 aa		4.08	□□□□□ -1.76
GRN-222	ENST00000639447	KRTAP5-1	Q6L8H4	278 aa		3.99	□□□□□ -1.77
GRN-222	ENST00000639447	INE1	O15225	51 aa		3.79	□□□□□ -1.8
GRN-222	ENST00000639447	LCE1E	Q5T753	118 aa		3.76	□□□□□ -1.81
GRN-222	ENST00000639447	LCE1B	Q5T7P3	118 aa		3.6	□□□□□ -1.83
GRN-222	ENST00000639447	KRTAP4-2	Q9BYR5	136 aa		3.58	□□□□□ -1.84
GRN-222	ENST00000639447	LCE1C	Q5T751	118 aa		3.49	□□□□□ -1.85
GRN-222	ENST00000639447	KRTAP4-12	Q9BQ66	201 aa		3.3	□□□□□ -1.88
GRN-222	ENST00000639447	LCE3D	Q9BYE3	92 aa		3.24	□□□□□ -1.89
GRN-222	ENST00000639447	KRTAP5-11	Q6L8G4	156 aa		3.2	□□□□□ -1.9
GRN-222	ENST00000639447	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.17	□□□□□ -1.9
GRN-222	ENST00000639447	LCE1F	Q5T754	118 aa		3.14	□□□□□ -1.91
GRN-222	ENST00000639447	LCE3E	Q5T5B0	92 aa		3.05	□□□□□ -1.92
GRN-222	ENST00000639447	PHGR1	C9JFL3	82 aa		2.93	□□□□□ -1.94
GRN-222	ENST00000639447	KRTAP21-2	Q3LI59	83 aa		2.91	□□□□□ -1.94
GRN-222	ENST00000639447	KRTAP4-4	Q9BYR3	166 aa		2.69	□□□□□ -1.98
GRN-222	ENST00000639447	PRM1	P04553	51 aa		2.63	□□□□□ -1.99
GRN-222	ENST00000639447	MUC19	Q7Z5P9	8384 aa		2.56	□□□□□ -2
GRN-222	ENST00000639447	KRTAP21-1	Q3LI58	79 aa		2.22	□□□□□ -2.05
GRN-222	ENST00000639447	MUC16	Q8WXI7	14507 aa		1.83	□□□□□ -2.12

Retrieved 77 of 20,778 RNA–protein pairs in 78.3 ms