RNA–Protein interactions for RNA: ENST00000639146.1

HADH-215, Transcript of hydroxyacyl-CoA dehydrogenase, human

TSL 5

Gene HADH, Length 1,964 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HADH-215	ENST00000639146	KRTAP5-9	P26371	169 aa		4.9	□□□□□ -1.63
HADH-215	ENST00000639146	KRTAP5-3	Q6L8H2	238 aa		4.83	□□□□□ -1.64
HADH-215	ENST00000639146	KRTAP12-3	P60328	96 aa		4.75	□□□□□ -1.65
HADH-215	ENST00000639146	SPRR2F	Q96RM1	72 aa		4.74	□□□□□ -1.65
HADH-215	ENST00000639146	KRTAP2-3	P0C7H8	128 aa		4.73	□□□□□ -1.65
HADH-215	ENST00000639146	KRTAP2-4	Q9BYR9	128 aa		4.73	□□□□□ -1.65
HADH-215	ENST00000639146	KRTAP10-12	P60413	245 aa		4.72	□□□□□ -1.65
HADH-215	ENST00000639146	SPRR2E	P22531	72 aa		4.71	□□□□□ -1.66
HADH-215	ENST00000639146	SPRR2B	P35325	72 aa		4.71	□□□□□ -1.66
HADH-215	ENST00000639146	SPRR2A	P35326	72 aa		4.71	□□□□□ -1.66
HADH-215	ENST00000639146	MT1X	P80297	61 aa		4.7	□□□□□ -1.66
HADH-215	ENST00000639146	LCE1A	Q5T7P2	110 aa		4.64	□□□□□ -1.67
HADH-215	ENST00000639146	KRTAP4-8	A0A0G2JLE6	195 aa		4.62	□□□□□ -1.67
HADH-215	ENST00000639146	KRTAP4-8	Q9BYQ9	185 aa		4.62	□□□□□ -1.67
HADH-215	ENST00000639146	KRTAP2-2	Q9BYT5	123 aa		4.58	□□□□□ -1.68
HADH-215	ENST00000639146	KRTAP2-1	Q9BYU5	128 aa		4.58	□□□□□ -1.68
HADH-215	ENST00000639146	SPRR2D	P22532	72 aa		4.54	□□□□□ -1.68
HADH-215	ENST00000639146	KRTAP10-7	P60409	375 aa	Predicted RBP	4.51	□□□□□ -1.69
HADH-215	ENST00000639146	LCE3C	Q5T5A8	94 aa		4.5	□□□□□ -1.69
HADH-215	ENST00000639146	LCE3B	Q5TA77	95 aa		4.45	□□□□□ -1.7
HADH-215	ENST00000639146	DST	Q03001	7570 aa	Known RBP	4.43	□□□□□ -1.7
HADH-215	ENST00000639146	KRTAP19-4	Q3LI73	84 aa		4.42	□□□□□ -1.7
HADH-215	ENST00000639146	KRTAP19-5	Q3LI72	72 aa		4.39	□□□□□ -1.71
HADH-215	ENST00000639146	KRTAP4-7	Q9BYR0	210 aa		4.37	□□□□□ -1.71
HADH-215	ENST00000639146	GPR98	Q8WXG9	6306 aa		4.35	□□□□□ -1.71
HADH-215	ENST00000639146	KRTAP9-6	A8MVA2	160 aa		4.27	□□□□□ -1.73
HADH-215	ENST00000639146	KRTAP4-9	Q9BYQ8	210 aa		4.26	□□□□□ -1.73
HADH-215	ENST00000639146	KRTAP19-7	Q3SYF9	63 aa		4.21	□□□□□ -1.74
HADH-215	ENST00000639146	LCE5A	Q5TCM9	118 aa		4.2	□□□□□ -1.74
HADH-215	ENST00000639146	KRTAP9-9	Q9BYP9	154 aa		4.2	□□□□□ -1.74
HADH-215	ENST00000639146	KRTAP9-4	Q9BYQ2	154 aa		4.2	□□□□□ -1.74
HADH-215	ENST00000639146	KRTAP4-2	Q9BYR5	136 aa		4.17	□□□□□ -1.74
HADH-215	ENST00000639146	MT1E	P04732	61 aa		4.16	□□□□□ -1.74
HADH-215	ENST00000639146	KRTAP19-3	Q7Z4W3	81 aa		4.15	□□□□□ -1.74
HADH-215	ENST00000639146	HMCN1	Q96RW7	5635 aa		4.12	□□□□□ -1.75
HADH-215	ENST00000639146	LCE1D	Q5T752	114 aa		4.09	□□□□□ -1.75
HADH-215	ENST00000639146	MT1L	Q93083	61 aa		4.06	□□□□□ -1.76
HADH-215	ENST00000639146	MT4	P47944	62 aa		4.04	□□□□□ -1.76
HADH-215	ENST00000639146	AHNAK2	Q8IVF2	5795 aa		4.02	□□□□□ -1.77
HADH-215	ENST00000639146	MT1G	P13640	62 aa		4.01	□□□□□ -1.77
HADH-215	ENST00000639146	KRTAP4-3	Q9BYR4	195 aa		3.98	□□□□□ -1.77
HADH-215	ENST00000639146	MT1M	Q8N339	61 aa		3.98	□□□□□ -1.77
HADH-215	ENST00000639146	LCE4A	Q5TA78	99 aa		3.95	□□□□□ -1.78
HADH-215	ENST00000639146	KRTAP5-4	Q6L8H1	288 aa		3.89	□□□□□ -1.79
HADH-215	ENST00000639146	KRTAP5-10	Q6L8G5	202 aa		3.89	□□□□□ -1.79
HADH-215	ENST00000639146	KRTAP12-4	P60329	112 aa		3.86	□□□□□ -1.79
HADH-215	ENST00000639146	KRTAP4-12	Q9BQ66	201 aa		3.82	□□□□□ -1.8
HADH-215	ENST00000639146	KRTAP5-7	Q6L8G8	165 aa		3.72	□□□□□ -1.81
HADH-215	ENST00000639146	KRTAP20-2	Q3LI61	65 aa		3.7	□□□□□ -1.82
HADH-215	ENST00000639146	MT1A	P04731	61 aa		3.69	□□□□□ -1.82
HADH-215	ENST00000639146	SYNE1	Q8NF91	8797 aa	Known RBP	3.69	□□□□□ -1.82
HADH-215	ENST00000639146	KRTAP5-5	Q701N2	237 aa	Predicted RBP	3.67	□□□□□ -1.82
HADH-215	ENST00000639146	KRTAP4-11	Q9BYQ6	195 aa		3.64	□□□□□ -1.83
HADH-215	ENST00000639146	LCE3E	Q5T5B0	92 aa		3.53	□□□□□ -1.84
HADH-215	ENST00000639146	LCE3D	Q9BYE3	92 aa		3.52	□□□□□ -1.85
HADH-215	ENST00000639146	PRM1	P04553	51 aa		3.46	□□□□□ -1.86
HADH-215	ENST00000639146	OBSCN	Q5VST9	7968 aa		3.44	□□□□□ -1.86
HADH-215	ENST00000639146	KRTAP6-1	Q3LI64	71 aa		3.4	□□□□□ -1.86
HADH-215	ENST00000639146	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.38	□□□□□ -1.87
HADH-215	ENST00000639146	KRTAP5-2	Q701N4	177 aa		3.37	□□□□□ -1.87
HADH-215	ENST00000639146	AHNAK	Q09666	5890 aa	Known RBP	3.34	□□□□□ -1.88
HADH-215	ENST00000639146	KRTAP5-8	O75690	187 aa		3.33	□□□□□ -1.88
HADH-215	ENST00000639146	MUC5AC	P98088	5654 aa		3.32	□□□□□ -1.88
HADH-215	ENST00000639146	KRTAP6-2	Q3LI66	62 aa		3.27	□□□□□ -1.89
HADH-215	ENST00000639146	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.25	□□□□□ -1.89
HADH-215	ENST00000639146	KRTAP5-1	Q6L8H4	278 aa		3.09	□□□□□ -1.91
HADH-215	ENST00000639146	MT3	P25713	68 aa		3.09	□□□□□ -1.92
HADH-215	ENST00000639146	LCE1E	Q5T753	118 aa		2.81	□□□□□ -1.96
HADH-215	ENST00000639146	LCE1B	Q5T7P3	118 aa		2.75	□□□□□ -1.97
HADH-215	ENST00000639146	LCE1C	Q5T751	118 aa		2.63	□□□□□ -1.99
HADH-215	ENST00000639146	KRTAP4-4	Q9BYR3	166 aa		2.62	□□□□□ -1.99
HADH-215	ENST00000639146	KRTAP5-11	Q6L8G4	156 aa		2.4	□□□□□ -2.02
HADH-215	ENST00000639146	LCE1F	Q5T754	118 aa		2.34	□□□□□ -2.04
HADH-215	ENST00000639146	KRTAP21-1	Q3LI58	79 aa		2.29	□□□□□ -2.04
HADH-215	ENST00000639146	PHGR1	C9JFL3	82 aa		2.27	□□□□□ -2.05
HADH-215	ENST00000639146	KRTAP21-2	Q3LI59	83 aa		2.22	□□□□□ -2.05
HADH-215	ENST00000639146	MUC19	Q7Z5P9	8384 aa		2.11	□□□□□ -2.07
HADH-215	ENST00000639146	MUC16	Q8WXI7	14507 aa		1.42	□□□□□ -2.18

Retrieved 78 of 20,778 RNA–protein pairs in 82.7 ms