RNA–Protein interactions for RNA: ENST00000638063.1

AMT-256, Transcript of aminomethyltransferase, human

TSL 5 BASIC

Gene AMT, Length 1,783 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
AMT-256	ENST00000638063	KRTAP19-7	Q3SYF9	63 aa		5.29	□□□□□ -1.56
AMT-256	ENST00000638063	KRTAP19-5	Q3LI72	72 aa		5.28	□□□□□ -1.56
AMT-256	ENST00000638063	KRTAP12-3	P60328	96 aa		5.26	□□□□□ -1.57
AMT-256	ENST00000638063	SPRR2F	Q96RM1	72 aa		5.26	□□□□□ -1.57
AMT-256	ENST00000638063	MDN1	Q9NU22	5596 aa		5.24	□□□□□ -1.57
AMT-256	ENST00000638063	MT1E	P04732	61 aa		5.21	□□□□□ -1.57
AMT-256	ENST00000638063	NDUFAF8	A1L188	74 aa		5.2	□□□□□ -1.58
AMT-256	ENST00000638063	LUZP6	Q538Z0	58 aa		5.18	□□□□□ -1.58
AMT-256	ENST00000638063	SPRR2E	P22531	72 aa		5.15	□□□□□ -1.58
AMT-256	ENST00000638063	SPRR2B	P35325	72 aa		5.15	□□□□□ -1.58
AMT-256	ENST00000638063	SPRR2A	P35326	72 aa		5.15	□□□□□ -1.58
AMT-256	ENST00000638063	KRTAP2-2	Q9BYT5	123 aa		5.14	□□□□□ -1.59
AMT-256	ENST00000638063	KRTAP2-1	Q9BYU5	128 aa		5.14	□□□□□ -1.59
AMT-256	ENST00000638063	KRTAP19-4	Q3LI73	84 aa		5.08	□□□□□ -1.6
AMT-256	ENST00000638063	KRTAP19-3	Q7Z4W3	81 aa		5.07	□□□□□ -1.6
AMT-256	ENST00000638063	MT1L	Q93083	61 aa		5.07	□□□□□ -1.6
AMT-256	ENST00000638063	LCE1A	Q5T7P2	110 aa		5.06	□□□□□ -1.6
AMT-256	ENST00000638063	MT1G	P13640	62 aa		5.03	□□□□□ -1.6
AMT-256	ENST00000638063	LCE5A	Q5TCM9	118 aa		5.01	□□□□□ -1.61
AMT-256	ENST00000638063	SPRR2D	P22532	72 aa		4.99	□□□□□ -1.61
AMT-256	ENST00000638063	MT1M	Q8N339	61 aa		4.92	□□□□□ -1.62
AMT-256	ENST00000638063	LCE3C	Q5T5A8	94 aa		4.89	□□□□□ -1.63
AMT-256	ENST00000638063	LCE3B	Q5TA77	95 aa		4.89	□□□□□ -1.63
AMT-256	ENST00000638063	KRTAP4-7	Q9BYR0	210 aa		4.81	□□□□□ -1.64
AMT-256	ENST00000638063	KRTAP4-3	Q9BYR4	195 aa		4.74	□□□□□ -1.65
AMT-256	ENST00000638063	GPR98	Q8WXG9	6306 aa		4.74	□□□□□ -1.65
AMT-256	ENST00000638063	DST	Q03001	7570 aa	Known RBP	4.71	□□□□□ -1.66
AMT-256	ENST00000638063	SPRR5	A0A1B0GTR4	108 aa		4.69	□□□□□ -1.66
AMT-256	ENST00000638063	KRTAP4-9	Q9BYQ8	210 aa		4.62	□□□□□ -1.67
AMT-256	ENST00000638063	KRTAP9-6	A8MVA2	160 aa		4.58	□□□□□ -1.68
AMT-256	ENST00000638063	LOC100996750	A0A140TA64	210 aa		4.53	□□□□□ -1.68
AMT-256	ENST00000638063	LCE1D	Q5T752	114 aa		4.49	□□□□□ -1.69
AMT-256	ENST00000638063	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.48	□□□□□ -1.69
AMT-256	ENST00000638063	LCE4A	Q5TA78	99 aa		4.42	□□□□□ -1.7
AMT-256	ENST00000638063	KRTAP5-4	Q6L8H1	288 aa		4.4	□□□□□ -1.71
AMT-256	ENST00000638063	MT4	P47944	62 aa		4.37	□□□□□ -1.71
AMT-256	ENST00000638063	KRTAP5-10	Q6L8G5	202 aa		4.36	□□□□□ -1.71
AMT-256	ENST00000638063	HMCN1	Q96RW7	5635 aa		4.35	□□□□□ -1.71
AMT-256	ENST00000638063	MT1A	P04731	61 aa		4.34	□□□□□ -1.71
AMT-256	ENST00000638063	INE1	O15225	51 aa		4.32	□□□□□ -1.72
AMT-256	ENST00000638063	AHNAK2	Q8IVF2	5795 aa		4.27	□□□□□ -1.73
AMT-256	ENST00000638063	KRTAP6-1	Q3LI64	71 aa		4.25	□□□□□ -1.73
AMT-256	ENST00000638063	KRTAP5-7	Q6L8G8	165 aa		4.25	□□□□□ -1.73
AMT-256	ENST00000638063	KRTAP4-6	Q9BYQ5	205 aa		4.24	□□□□□ -1.73
AMT-256	ENST00000638063	KRTAP12-4	P60329	112 aa		4.23	□□□□□ -1.73
AMT-256	ENST00000638063	SYNE1	Q8NF91	8797 aa	Known RBP	4.21	□□□□□ -1.73
AMT-256	ENST00000638063	KRTAP5-3	Q6L8H2	238 aa		4.18	□□□□□ -1.74
AMT-256	ENST00000638063	KRTAP9-4	Q9BYQ2	154 aa		4.13	□□□□□ -1.75
AMT-256	ENST00000638063	KRTAP20-2	Q3LI61	65 aa		4.09	□□□□□ -1.75
AMT-256	ENST00000638063	KRTAP6-2	Q3LI66	62 aa		3.96	□□□□□ -1.78
AMT-256	ENST00000638063	MT3	P25713	68 aa		3.95	□□□□□ -1.78
AMT-256	ENST00000638063	KRTAP5-2	Q701N4	177 aa		3.95	□□□□□ -1.78
AMT-256	ENST00000638063	KRTAP4-11	Q9BYQ6	195 aa		3.79	□□□□□ -1.8
AMT-256	ENST00000638063	KRTAP5-8	O75690	187 aa		3.66	□□□□□ -1.82
AMT-256	ENST00000638063	LCE3D	Q9BYE3	92 aa		3.64	□□□□□ -1.83
AMT-256	ENST00000638063	MUC5AC	P98088	5654 aa		3.64	□□□□□ -1.83
AMT-256	ENST00000638063	AHNAK	Q09666	5890 aa	Known RBP	3.63	□□□□□ -1.83
AMT-256	ENST00000638063	OBSCN	Q5VST9	7968 aa		3.62	□□□□□ -1.83
AMT-256	ENST00000638063	MUC5B	Q9HC84	5762 aa	Predicted RBP	3.57	□□□□□ -1.84
AMT-256	ENST00000638063	KRTAP9-9	Q9BYP9	154 aa		3.53	□□□□□ -1.84
AMT-256	ENST00000638063	LCE3E	Q5T5B0	92 aa		3.52	□□□□□ -1.85
AMT-256	ENST00000638063	LCE1E	Q5T753	118 aa		3.52	□□□□□ -1.85
AMT-256	ENST00000638063	KRTAP5-1	Q6L8H4	278 aa		3.43	□□□□□ -1.86
AMT-256	ENST00000638063	LCE1C	Q5T751	118 aa		3.26	□□□□□ -1.89
AMT-256	ENST00000638063	LCE1B	Q5T7P3	118 aa		3.26	□□□□□ -1.89
AMT-256	ENST00000638063	KRTAP4-2	Q9BYR5	136 aa		3.24	□□□□□ -1.89
AMT-256	ENST00000638063	LCE1F	Q5T754	118 aa		3.17	□□□□□ -1.9
AMT-256	ENST00000638063	KRTAP5-6	Q6L8G9	129 aa	Predicted RBP	3.05	□□□□□ -1.92
AMT-256	ENST00000638063	PRM1	P04553	51 aa		2.93	□□□□□ -1.94
AMT-256	ENST00000638063	KRTAP5-11	Q6L8G4	156 aa		2.9	□□□□□ -1.94
AMT-256	ENST00000638063	KRTAP21-2	Q3LI59	83 aa		2.81	□□□□□ -1.96
AMT-256	ENST00000638063	KRTAP4-12	Q9BQ66	201 aa		2.77	□□□□□ -1.97
AMT-256	ENST00000638063	PHGR1	C9JFL3	82 aa		2.54	□□□□□ -2
AMT-256	ENST00000638063	KRTAP4-4	Q9BYR3	166 aa		2.44	□□□□□ -2.02
AMT-256	ENST00000638063	MUC19	Q7Z5P9	8384 aa		2.17	□□□□□ -2.06
AMT-256	ENST00000638063	KRTAP21-1	Q3LI58	79 aa		1.95	□□□□□ -2.1
AMT-256	ENST00000638063	MUC16	Q8WXI7	14507 aa		1.58	□□□□□ -2.16

Retrieved 77 of 20,778 RNA–protein pairs in 151.5 ms