RNA–Protein interactions for RNA: ENST00000636840.1

PNKP-226, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 117 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-226ENST00000636840 KRTAP2-2Q9BYT5 123 aa3□□□□□ -1.93
PNKP-226ENST00000636840 KRTAP2-1Q9BYU5 128 aa3□□□□□ -1.93
PNKP-226ENST00000636840 PP632Q6XCG6 107 aa2.99□□□□□ -1.93
PNKP-226ENST00000636840 MT1GP13640 62 aa2.98□□□□□ -1.93
PNKP-226ENST00000636840 LCE3BQ5TA77 95 aa2.97□□□□□ -1.93
PNKP-226ENST00000636840 LCE5AQ5TCM9 118 aa2.97□□□□□ -1.93
PNKP-226ENST00000636840 KRTAP23-1A1A580 65 aa2.95□□□□□ -1.94
PNKP-226ENST00000636840 ROMO1P60602 79 aa2.95□□□□□ -1.94
PNKP-226ENST00000636840 KRTAP12-3P60328 96 aa2.94□□□□□ -1.94
PNKP-226ENST00000636840 MT1LQ93083 61 aa2.92□□□□□ -1.94
PNKP-226ENST00000636840 DSTQ03001 7570 aaKnown RBP2.91□□□□□ -1.94
PNKP-226ENST00000636840 MT1MQ8N339 61 aa2.88□□□□□ -1.95
PNKP-226ENST00000636840 KRTAP19-4Q3LI73 84 aa2.87□□□□□ -1.95
PNKP-226ENST00000636840 BRK1Q8WUW1 75 aa2.84□□□□□ -1.95
PNKP-226ENST00000636840 KRTAP15-1Q3LI76 137 aa2.82□□□□□ -1.96
PNKP-226ENST00000636840 KRTAP4-3Q9BYR4 195 aa2.77□□□□□ -1.97
PNKP-226ENST00000636840 KRTAP4-7Q9BYR0 210 aa2.75□□□□□ -1.97
PNKP-226ENST00000636840 LCE4AQ5TA78 99 aa2.74□□□□□ -1.97
PNKP-226ENST00000636840 LCE3CQ5T5A8 94 aa2.72□□□□□ -1.97
PNKP-226ENST00000636840 PMAIP1Q13794 54 aa2.71□□□□□ -1.98
PNKP-226ENST00000636840 KRTAP4-9Q9BYQ8 210 aa2.7□□□□□ -1.98
PNKP-226ENST00000636840 MT4P47944 62 aa2.66□□□□□ -1.98
PNKP-226ENST00000636840 LCE1DQ5T752 114 aa2.65□□□□□ -1.99
PNKP-226ENST00000636840 KRTAP5-4Q6L8H1 288 aa2.65□□□□□ -1.99
PNKP-226ENST00000636840 HMCN1Q96RW7 5635 aa2.62□□□□□ -1.99
PNKP-226ENST00000636840 KRTAP12-4P60329 112 aa2.61□□□□□ -1.99
PNKP-226ENST00000636840 LOC100996750A0A140TA64 210 aa2.6□□□□□ -1.99
PNKP-226ENST00000636840 PRO0628Q9UI54 55 aa2.6□□□□□ -1.99
PNKP-226ENST00000636840 KRTAP5-5Q701N2 237 aaPredicted RBP2.59□□□□□ -1.99
PNKP-226ENST00000636840 KRTAP4-6Q9BYQ5 205 aa2.57□□□□□ -2
PNKP-226ENST00000636840 SPRR5A0A1B0GTR4 108 aa2.54□□□□□ -2
PNKP-226ENST00000636840 KRTAP20-2Q3LI61 65 aa2.51□□□□□ -2.01
PNKP-226ENST00000636840 MT1AP04731 61 aa2.5□□□□□ -2.01
PNKP-226ENST00000636840 PRAC1Q96KF2 57 aa2.5□□□□□ -2.01
PNKP-226ENST00000636840 AHNAK2Q8IVF2 5795 aa2.5□□□□□ -2.01
PNKP-226ENST00000636840 GPR98Q8WXG9 6306 aa2.49□□□□□ -2.01
PNKP-226ENST00000636840 SYNE1Q8NF91 8797 aaKnown RBP2.49□□□□□ -2.01
PNKP-226ENST00000636840 KRTAP9-6A8MVA2 160 aa2.48□□□□□ -2.01
PNKP-226ENST00000636840 KRTAP6-1Q3LI64 71 aa2.46□□□□□ -2.02
PNKP-226ENST00000636840 KTN1-AS1Q86SY8 53 aa2.44□□□□□ -2.02
PNKP-226ENST00000636840 KRTAP9-4Q9BYQ2 154 aa2.42□□□□□ -2.02
PNKP-226ENST00000636840 KRTAP5-3Q6L8H2 238 aa2.41□□□□□ -2.02
PNKP-226ENST00000636840 KRTAP5-10Q6L8G5 202 aa2.38□□□□□ -2.03
PNKP-226ENST00000636840 SVIPQ8NHG7 77 aa2.36□□□□□ -2.03
PNKP-226ENST00000636840 MT3P25713 68 aa2.33□□□□□ -2.04
PNKP-226ENST00000636840 KRTAP6-2Q3LI66 62 aa2.33□□□□□ -2.04
PNKP-226ENST00000636840 KRTAP5-2Q701N4 177 aa2.33□□□□□ -2.04
PNKP-226ENST00000636840 KRTAP5-7Q6L8G8 165 aa2.29□□□□□ -2.04
PNKP-226ENST00000636840 KRTAP4-11Q9BYQ6 195 aa2.27□□□□□ -2.05
PNKP-226ENST00000636840 OBSCNQ5VST9 7968 aa2.25□□□□□ -2.05
PNKP-226ENST00000636840 LUZP6Q538Z0 58 aa2.22□□□□□ -2.05
PNKP-226ENST00000636840 KRTAP5-8O75690 187 aa2.16□□□□□ -2.06
PNKP-226ENST00000636840 KRTAP9-9Q9BYP9 154 aa2.1□□□□□ -2.07
PNKP-226ENST00000636840 MUC5ACP98088 5654 aa2.09□□□□□ -2.07
PNKP-226ENST00000636840 LCE1EQ5T753 118 aa2.09□□□□□ -2.07
PNKP-226ENST00000636840 KRTAP5-1Q6L8H4 278 aa2.07□□□□□ -2.08
PNKP-226ENST00000636840 AHNAKQ09666 5890 aaKnown RBP2.06□□□□□ -2.08
PNKP-226ENST00000636840 MUC5BQ9HC84 5762 aaPredicted RBP2.04□□□□□ -2.08
PNKP-226ENST00000636840 LCE3DQ9BYE3 92 aa2.02□□□□□ -2.09
PNKP-226ENST00000636840 LCE1BQ5T7P3 118 aa1.96□□□□□ -2.1
PNKP-226ENST00000636840 LCE3EQ5T5B0 92 aa1.93□□□□□ -2.1
PNKP-226ENST00000636840 LCE1CQ5T751 118 aa1.92□□□□□ -2.1
PNKP-226ENST00000636840 KRTAP4-2Q9BYR5 136 aa1.9□□□□□ -2.11
PNKP-226ENST00000636840 NDUFAF8A1L188 74 aa1.83□□□□□ -2.12
PNKP-226ENST00000636840 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.75□□□□□ -2.13
PNKP-226ENST00000636840 KRTAP5-11Q6L8G4 156 aa1.72□□□□□ -2.13
PNKP-226ENST00000636840 KRTAP4-12Q9BQ66 201 aa1.7□□□□□ -2.14
PNKP-226ENST00000636840 LCE1FQ5T754 118 aa1.68□□□□□ -2.14
PNKP-226ENST00000636840 A0A0A0MQY5 61 aa1.6□□□□□ -2.15
PNKP-226ENST00000636840 KRTAP21-2Q3LI59 83 aa1.6□□□□□ -2.15
PNKP-226ENST00000636840 INE1O15225 51 aa1.54□□□□□ -2.16
PNKP-226ENST00000636840 PRM1P04553 51 aa1.49□□□□□ -2.17
PNKP-226ENST00000636840 PHGR1C9JFL3 82 aa1.48□□□□□ -2.17
PNKP-226ENST00000636840 KRTAP4-4Q9BYR3 166 aa1.46□□□□□ -2.18
PNKP-226ENST00000636840 MUC19Q7Z5P9 8384 aa1.38□□□□□ -2.19
PNKP-226ENST00000636840 KRTAP21-1Q3LI58 79 aa1.09□□□□□ -2.23
PNKP-226ENST00000636840 H3BS24 57 aa0.99□□□□□ -2.25
PNKP-226ENST00000636840 MUC16Q8WXI7 14507 aa0.93□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 88.5 ms