RNA–Protein interactions for RNA: ENST00000636681.1

CLN5-213, Transcript of CLN5, intracellular trafficking protein, humanhuman

TSL 5

Gene CLN5, Length 1,791 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-213ENST00000636681 LCE3AQ5TA76 89 aa4.09□□□□□ -1.75
CLN5-213ENST00000636681 PMAIP1Q13794 54 aa4.07□□□□□ -1.76
CLN5-213ENST00000636681 KRTAP8-1Q8IUC2 63 aa4.07□□□□□ -1.76
CLN5-213ENST00000636681 KRTAP25-1Q3LHN0 102 aa4.06□□□□□ -1.76
CLN5-213ENST00000636681 MUC12Q9UKN1 5478 aa4.04□□□□□ -1.76
CLN5-213ENST00000636681 KRTAP9-7A8MTY7 169 aa4.04□□□□□ -1.76
CLN5-213ENST00000636681 KRTAP19-5Q3LI72 72 aa4□□□□□ -1.77
CLN5-213ENST00000636681 SPRR2FQ96RM1 72 aa4□□□□□ -1.77
CLN5-213ENST00000636681 NDUFAF8A1L188 74 aa3.99□□□□□ -1.77
CLN5-213ENST00000636681 KRTAP6-3Q3LI67 103 aa3.99□□□□□ -1.77
CLN5-213ENST00000636681 KRTAP19-7Q3SYF9 63 aa3.99□□□□□ -1.77
CLN5-213ENST00000636681 KRTAP5-9P26371 169 aa3.98□□□□□ -1.77
CLN5-213ENST00000636681 MDN1Q9NU22 5596 aa3.96□□□□□ -1.78
CLN5-213ENST00000636681 MT1EP04732 61 aa3.92□□□□□ -1.78
CLN5-213ENST00000636681 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.91□□□□□ -1.78
CLN5-213ENST00000636681 KRTAP12-3P60328 96 aa3.89□□□□□ -1.79
CLN5-213ENST00000636681 LCE5AQ5TCM9 118 aa3.86□□□□□ -1.79
CLN5-213ENST00000636681 LCE1AQ5T7P2 110 aa3.85□□□□□ -1.79
CLN5-213ENST00000636681 LUZP6Q538Z0 58 aa3.84□□□□□ -1.79
CLN5-213ENST00000636681 SPRR2EP22531 72 aa3.84□□□□□ -1.8
CLN5-213ENST00000636681 SPRR2BP35325 72 aa3.84□□□□□ -1.8
CLN5-213ENST00000636681 SPRR2AP35326 72 aa3.84□□□□□ -1.8
CLN5-213ENST00000636681 PP632Q6XCG6 107 aa3.81□□□□□ -1.8
CLN5-213ENST00000636681 LCE4AQ5TA78 99 aa3.81□□□□□ -1.8
CLN5-213ENST00000636681 MT1LQ93083 61 aa3.81□□□□□ -1.8
CLN5-213ENST00000636681 KTN1-AS1Q86SY8 53 aa3.8□□□□□ -1.8
CLN5-213ENST00000636681 KRTAP19-3Q7Z4W3 81 aa3.78□□□□□ -1.8
CLN5-213ENST00000636681 NEBP20929 6669 aa3.77□□□□□ -1.81
CLN5-213ENST00000636681 KRTAP4-3Q9BYR4 195 aa3.72□□□□□ -1.81
CLN5-213ENST00000636681 MT1GP13640 62 aa3.71□□□□□ -1.82
CLN5-213ENST00000636681 MT1MQ8N339 61 aa3.71□□□□□ -1.82
CLN5-213ENST00000636681 DSTQ03001 7570 aaKnown RBP3.7□□□□□ -1.82
CLN5-213ENST00000636681 SPRR2DP22532 72 aa3.7□□□□□ -1.82
CLN5-213ENST00000636681 LCE3CQ5T5A8 94 aa3.61□□□□□ -1.83
CLN5-213ENST00000636681 KRTAP20-1Q3LI63 56 aa3.54□□□□□ -1.84
CLN5-213ENST00000636681 KRTAP2-3P0C7H8 128 aa3.53□□□□□ -1.84
CLN5-213ENST00000636681 KRTAP2-4Q9BYR9 128 aa3.53□□□□□ -1.84
CLN5-213ENST00000636681 KRTAP9-6A8MVA2 160 aa3.51□□□□□ -1.85
CLN5-213ENST00000636681 KRTAP2-2Q9BYT5 123 aa3.44□□□□□ -1.86
CLN5-213ENST00000636681 KRTAP2-1Q9BYU5 128 aa3.44□□□□□ -1.86
CLN5-213ENST00000636681 SPRR5A0A1B0GTR4 108 aa3.38□□□□□ -1.87
CLN5-213ENST00000636681 MT3P25713 68 aa3.37□□□□□ -1.87
CLN5-213ENST00000636681 KRTAP5-4Q6L8H1 288 aa3.36□□□□□ -1.87
CLN5-213ENST00000636681 KRTAP5-5Q701N2 237 aaPredicted RBP3.35□□□□□ -1.87
CLN5-213ENST00000636681 SYNE1Q8NF91 8797 aaKnown RBP3.27□□□□□ -1.89
CLN5-213ENST00000636681 MT4P47944 62 aa3.26□□□□□ -1.89
CLN5-213ENST00000636681 KRTAP6-1Q3LI64 71 aa3.25□□□□□ -1.89
CLN5-213ENST00000636681 KRTAP4-4Q9BYR3 166 aa3.23□□□□□ -1.89
CLN5-213ENST00000636681 HMCN1Q96RW7 5635 aa3.21□□□□□ -1.89
CLN5-213ENST00000636681 MT1AP04731 61 aa3.21□□□□□ -1.9
CLN5-213ENST00000636681 KRTAP5-1Q6L8H4 278 aa3.21□□□□□ -1.9
CLN5-213ENST00000636681 KRTAP5-11Q6L8G4 156 aa3.17□□□□□ -1.9
CLN5-213ENST00000636681 LCE1FQ5T754 118 aa3.17□□□□□ -1.9
CLN5-213ENST00000636681 KRTAP12-4P60329 112 aa3.1□□□□□ -1.91
CLN5-213ENST00000636681 KRTAP20-2Q3LI61 65 aa3.1□□□□□ -1.91
CLN5-213ENST00000636681 KRTAP5-2Q701N4 177 aa3.05□□□□□ -1.92
CLN5-213ENST00000636681 KRTAP6-2Q3LI66 62 aa3.02□□□□□ -1.93
CLN5-213ENST00000636681 AHNAK2Q8IVF2 5795 aa2.94□□□□□ -1.94
CLN5-213ENST00000636681 OBSCNQ5VST9 7968 aa2.89□□□□□ -1.95
CLN5-213ENST00000636681 KRTAP5-10Q6L8G5 202 aa2.78□□□□□ -1.96
CLN5-213ENST00000636681 KRTAP5-8O75690 187 aa2.76□□□□□ -1.97
CLN5-213ENST00000636681 GPR98Q8WXG9 6306 aa2.74□□□□□ -1.97
CLN5-213ENST00000636681 LCE3EQ5T5B0 92 aa2.7□□□□□ -1.98
CLN5-213ENST00000636681 INE1O15225 51 aa2.68□□□□□ -1.98
CLN5-213ENST00000636681 LCE3DQ9BYE3 92 aa2.66□□□□□ -1.98
CLN5-213ENST00000636681 KRTAP5-7Q6L8G8 165 aa2.58□□□□□ -2
CLN5-213ENST00000636681 MUC5ACP98088 5654 aa2.54□□□□□ -2
CLN5-213ENST00000636681 LCE1EQ5T753 118 aa2.53□□□□□ -2
CLN5-213ENST00000636681 LCE1BQ5T7P3 118 aa2.47□□□□□ -2.01
CLN5-213ENST00000636681 MUC5BQ9HC84 5762 aaPredicted RBP2.38□□□□□ -2.03
CLN5-213ENST00000636681 LCE1CQ5T751 118 aa2.38□□□□□ -2.03
CLN5-213ENST00000636681 AHNAKQ09666 5890 aaKnown RBP2.25□□□□□ -2.05
CLN5-213ENST00000636681 PRM1P04553 51 aa2.18□□□□□ -2.06
CLN5-213ENST00000636681 KRTAP21-2Q3LI59 83 aa2.12□□□□□ -2.07
CLN5-213ENST00000636681 PHGR1C9JFL3 82 aa1.84□□□□□ -2.12
CLN5-213ENST00000636681 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
CLN5-213ENST00000636681 KRTAP21-1Q3LI58 79 aa1.26□□□□□ -2.21
CLN5-213ENST00000636681 MUC16Q8WXI7 14507 aa1.18□□□□□ -2.22
Retrieved 78 of 20,778 RNA–protein pairs in 57.9 ms