RNA–Protein interactions for RNA: ENST00000636443.1

SYNGAP1-215, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 79 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-215ENST00000636443 RPS28P62857 69 aaKnown RBP0.11□□□□□ -2.39
SYNGAP1-215ENST00000636443 NDUFA5Q16718 116 aa0.11□□□□□ -2.39
SYNGAP1-215ENST00000636443 C14orf144Q96I85 54 aa0.11□□□□□ -2.39
SYNGAP1-215ENST00000636443 TAX1BP3O14907 124 aa0.1□□□□□ -2.39
SYNGAP1-215ENST00000636443 DLEU1O43261 78 aa0.09□□□□□ -2.4
SYNGAP1-215ENST00000636443 HIST1H4AP62805 103 aaKnown RBP0.09□□□□□ -2.4
SYNGAP1-215ENST00000636443 SVBPQ8N300 66 aa0.09□□□□□ -2.4
SYNGAP1-215ENST00000636443 KRTAP23-1A1A580 65 aa0.08□□□□□ -2.4
SYNGAP1-215ENST00000636443 HSD52Q0P140 79 aa0.08□□□□□ -2.4
SYNGAP1-215ENST00000636443 PRR15LQ9BU68 103 aa0.08□□□□□ -2.4
SYNGAP1-215ENST00000636443 H3BPC8 53 aa0.07□□□□□ -2.4
SYNGAP1-215ENST00000636443 HIST1H2BKO60814 126 aa0.07□□□□□ -2.4
SYNGAP1-215ENST00000636443 HIST1H2BJP06899 126 aa0.07□□□□□ -2.4
SYNGAP1-215ENST00000636443 HIST1H2BOP23527 126 aa0.07□□□□□ -2.4
SYNGAP1-215ENST00000636443 HIST1H2BBP33778 126 aa0.07□□□□□ -2.4
SYNGAP1-215ENST00000636443 HIST1H2BDP58876 126 aa0.07□□□□□ -2.4
SYNGAP1-215ENST00000636443 HIST1H2BCP62807 126 aa0.07□□□□□ -2.4
SYNGAP1-215ENST00000636443 HIST2H2BEQ16778 126 aa0.07□□□□□ -2.4
SYNGAP1-215ENST00000636443 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.07□□□□□ -2.4
SYNGAP1-215ENST00000636443 HIST1H2BHQ93079 126 aa0.07□□□□□ -2.4
SYNGAP1-215ENST00000636443 HIST1H2BNQ99877 126 aa0.07□□□□□ -2.4
SYNGAP1-215ENST00000636443 HIST1H2BMQ99879 126 aa0.07□□□□□ -2.4
SYNGAP1-215ENST00000636443 H3BT86 120 aa0.06□□□□□ -2.4
SYNGAP1-215ENST00000636443 S100A2P29034 98 aa0.06□□□□□ -2.4
SYNGAP1-215ENST00000636443 A0A1B0GU69 56 aa0.05□□□□□ -2.4
SYNGAP1-215ENST00000636443 OCR1Q9BZK8 76 aa0.03□□□□□ -2.4
SYNGAP1-215ENST00000636443 K7ERS5 55 aa0.02□□□□□ -2.41
SYNGAP1-215ENST00000636443 S100A1P23297 94 aa0.01□□□□□ -2.41
SYNGAP1-215ENST00000636443 ATP5EP2Q5VTU8 51 aa0.01□□□□□ -2.41
SYNGAP1-215ENST00000636443 COA5Q86WW8 74 aa0.01□□□□□ -2.41
SYNGAP1-215ENST00000636443 S100A6P06703 90 aa0□□□□□ -2.41
SYNGAP1-215ENST00000636443 M0R143 59 aa-0.03□□□□□ -2.41
SYNGAP1-215ENST00000636443 CDC42SE1Q9NRR8 79 aa-0.04□□□□□ -2.42
SYNGAP1-215ENST00000636443 UQCR10Q9UDW1 63 aa-0.04□□□□□ -2.42
SYNGAP1-215ENST00000636443 SNURFQ9Y675 71 aa-0.04□□□□□ -2.42
SYNGAP1-215ENST00000636443 PRM1P04553 51 aa-0.05□□□□□ -2.42
SYNGAP1-215ENST00000636443 UQCR11O14957 56 aa-0.06□□□□□ -2.42
SYNGAP1-215ENST00000636443 C9orf118A6NHY6 69 aa-0.08□□□□□ -2.42
SYNGAP1-215ENST00000636443 ROMO1P60602 79 aa-0.08□□□□□ -2.42
SYNGAP1-215ENST00000636443 MIR22HGQ0VDD5 57 aa-0.08□□□□□ -2.42
SYNGAP1-215ENST00000636443 ETDBQ3ZM63 59 aa-0.09□□□□□ -2.42
SYNGAP1-215ENST00000636443 LINC00643Q86TS7 51 aa-0.09□□□□□ -2.42
SYNGAP1-215ENST00000636443 SMIM20Q8N5G0 67 aa-0.11□□□□□ -2.43
SYNGAP1-215ENST00000636443 PRO0461Q9UI25 63 aa-0.11□□□□□ -2.43
SYNGAP1-215ENST00000636443 FAM240AA0A1B0GVK7 77 aa-0.12□□□□□ -2.43
SYNGAP1-215ENST00000636443 Q1T7F1 81 aa-0.13□□□□□ -2.43
SYNGAP1-215ENST00000636443 PYY3Q5JQD4 70 aa-0.14□□□□□ -2.43
SYNGAP1-215ENST00000636443 COL5A1-AS1Q5SY13 56 aa-0.14□□□□□ -2.43
SYNGAP1-215ENST00000636443 F8W1H4 67 aa-0.15□□□□□ -2.43
SYNGAP1-215ENST00000636443 GTF2H5Q6ZYL4 71 aa-0.15□□□□□ -2.43
SYNGAP1-215ENST00000636443 LINC01558Q9Y6Z2 57 aa-0.16□□□□□ -2.44
SYNGAP1-215ENST00000636443 A6NED7 52 aa-0.22□□□□□ -2.44
SYNGAP1-215ENST00000636443 PSPHP1O15172 72 aa-0.22□□□□□ -2.44
SYNGAP1-215ENST00000636443 SMIM6P0DI80 62 aa-0.22□□□□□ -2.44
SYNGAP1-215ENST00000636443 J3QR89 54 aa-0.25□□□□□ -2.45
SYNGAP1-215ENST00000636443 TMEM258P61165 79 aa-0.26□□□□□ -2.45
SYNGAP1-215ENST00000636443 LUZP6Q538Z0 58 aa-0.27□□□□□ -2.45
SYNGAP1-215ENST00000636443 TMA7Q9Y2S6 64 aaKnown RBP-0.28□□□□□ -2.45
SYNGAP1-215ENST00000636443 COX7CP15954 63 aa-0.29□□□□□ -2.46
SYNGAP1-215ENST00000636443 ATP5EP56381 51 aaPredicted RBP-0.29□□□□□ -2.46
SYNGAP1-215ENST00000636443 NDUFAF8A1L188 74 aa-0.3□□□□□ -2.46
SYNGAP1-215ENST00000636443 V9GYY9 64 aa-0.3□□□□□ -2.46
SYNGAP1-215ENST00000636443 BRK1Q8WUW1 75 aa-0.34□□□□□ -2.46
SYNGAP1-215ENST00000636443 A0A1B0GV90 55 aa-0.36□□□□□ -2.47
SYNGAP1-215ENST00000636443 INE1O15225 51 aa-0.37□□□□□ -2.47
SYNGAP1-215ENST00000636443 PCP4L1A6NKN8 68 aa-0.39□□□□□ -2.47
SYNGAP1-215ENST00000636443 K7ERU9 68 aa-0.39□□□□□ -2.47
SYNGAP1-215ENST00000636443 ANAPC13Q9BS18 74 aa-0.39□□□□□ -2.47
SYNGAP1-215ENST00000636443 CCDC179H3BU77 68 aa-0.4□□□□□ -2.47
SYNGAP1-215ENST00000636443 A0A0A0MQY5 61 aa-0.41□□□□□ -2.48
SYNGAP1-215ENST00000636443 KTN1-AS1Q86SY8 53 aa-0.42□□□□□ -2.48
SYNGAP1-215ENST00000636443 PRAC1Q96KF2 57 aa-0.42□□□□□ -2.48
SYNGAP1-215ENST00000636443 H3BS24 57 aa-0.44□□□□□ -2.48
SYNGAP1-215ENST00000636443 SVIPQ8NHG7 77 aa-0.49□□□□□ -2.49
SYNGAP1-215ENST00000636443 LOC105371267A0A1B0GV96 52 aa-0.5□□□□□ -2.49
SYNGAP1-215ENST00000636443 PMAIP1Q13794 54 aa-0.52□□□□□ -2.49
SYNGAP1-215ENST00000636443 PRO0628Q9UI54 55 aa-0.52□□□□□ -2.49
SYNGAP1-215ENST00000636443 PCP4P48539 62 aa-0.53□□□□□ -2.49
Retrieved 78 of 20,778 RNA–protein pairs in 63.8 ms