RNA–Protein interactions for RNA: ENST00000636020.1

CLN6-212, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 894 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-212ENST00000636020 A0A1B0GU33 70 aa6.67□□□□□ -1.34
CLN6-212ENST00000636020 MT1GP13640 62 aa6.65□□□□□ -1.34
CLN6-212ENST00000636020 KRTAP13-4Q3LI77 160 aa6.64□□□□□ -1.35
CLN6-212ENST00000636020 UQCR11O14957 56 aa6.58□□□□□ -1.36
CLN6-212ENST00000636020 SPATA8Q6RVD6 105 aa6.57□□□□□ -1.36
CLN6-212ENST00000636020 PP632Q6XCG6 107 aa6.57□□□□□ -1.36
CLN6-212ENST00000636020 A6NED7 52 aa6.52□□□□□ -1.37
CLN6-212ENST00000636020 MT1MQ8N339 61 aa6.52□□□□□ -1.37
CLN6-212ENST00000636020 MIR22HGQ0VDD5 57 aa6.5□□□□□ -1.37
CLN6-212ENST00000636020 A8MU10 97 aa6.46□□□□□ -1.38
CLN6-212ENST00000636020 A0A0D9SG42 100 aa6.43□□□□□ -1.38
CLN6-212ENST00000636020 KRTAP4-3Q9BYR4 195 aa6.42□□□□□ -1.38
CLN6-212ENST00000636020 CDC42SE1Q9NRR8 79 aa6.42□□□□□ -1.38
CLN6-212ENST00000636020 KRTAP19-5Q3LI72 72 aa6.41□□□□□ -1.38
CLN6-212ENST00000636020 KRTAP20-2Q3LI61 65 aa6.39□□□□□ -1.39
CLN6-212ENST00000636020 KRTAP12-1P59990 96 aa6.37□□□□□ -1.39
CLN6-212ENST00000636020 MT1LQ93083 61 aa6.35□□□□□ -1.39
CLN6-212ENST00000636020 BRK1Q8WUW1 75 aa6.32□□□□□ -1.4
CLN6-212ENST00000636020 AHNAKQ09666 5890 aaKnown RBP6.31□□□□□ -1.4
CLN6-212ENST00000636020 SPINT4Q6UDR6 99 aa6.29□□□□□ -1.4
CLN6-212ENST00000636020 CAMK2N1Q7Z7J9 78 aa6.28□□□□□ -1.4
CLN6-212ENST00000636020 K7ERS5 55 aa6.2□□□□□ -1.42
CLN6-212ENST00000636020 MUC5ACP98088 5654 aa6.19□□□□□ -1.42
CLN6-212ENST00000636020 SYNE1Q8NF91 8797 aaKnown RBP6.15□□□□□ -1.42
CLN6-212ENST00000636020 MUC5BQ9HC84 5762 aaPredicted RBP6.12□□□□□ -1.43
CLN6-212ENST00000636020 PRO0628Q9UI54 55 aa6.11□□□□□ -1.43
CLN6-212ENST00000636020 KRTAP12-4P60329 112 aa6.1□□□□□ -1.43
CLN6-212ENST00000636020 KRTAP5-5Q701N2 237 aaPredicted RBP6.07□□□□□ -1.44
CLN6-212ENST00000636020 KRTAP4-11Q9BYQ6 195 aa6.04□□□□□ -1.44
CLN6-212ENST00000636020 C10orf95Q9H7T3 257 aa6.03□□□□□ -1.44
CLN6-212ENST00000636020 KRTAP4-7Q9BYR0 210 aa6.02□□□□□ -1.45
CLN6-212ENST00000636020 PMAIP1Q13794 54 aa5.96□□□□□ -1.46
CLN6-212ENST00000636020 ROMO1P60602 79 aa5.95□□□□□ -1.46
CLN6-212ENST00000636020 KRTAP5-8O75690 187 aa5.9□□□□□ -1.46
CLN6-212ENST00000636020 TNP1P09430 55 aa5.85□□□□□ -1.47
CLN6-212ENST00000636020 LCE3AQ5TA76 89 aa5.85□□□□□ -1.47
CLN6-212ENST00000636020 KRTAP25-1Q3LHN0 102 aa5.83□□□□□ -1.48
CLN6-212ENST00000636020 OBSCNQ5VST9 7968 aa5.75□□□□□ -1.49
CLN6-212ENST00000636020 KRTAP5-2Q701N4 177 aa5.75□□□□□ -1.49
CLN6-212ENST00000636020 LOC100996750A0A140TA64 210 aa5.74□□□□□ -1.49
CLN6-212ENST00000636020 KTN1-AS1Q86SY8 53 aa5.69□□□□□ -1.5
CLN6-212ENST00000636020 KRTAP9-9Q9BYP9 154 aa5.69□□□□□ -1.5
CLN6-212ENST00000636020 KRTAP23-1A1A580 65 aa5.65□□□□□ -1.5
CLN6-212ENST00000636020 PRAC1Q96KF2 57 aa5.63□□□□□ -1.51
CLN6-212ENST00000636020 KRTAP12-3P60328 96 aa5.61□□□□□ -1.51
CLN6-212ENST00000636020 KRTAP6-1Q3LI64 71 aa5.42□□□□□ -1.54
CLN6-212ENST00000636020 MT1AP04731 61 aa5.38□□□□□ -1.55
CLN6-212ENST00000636020 KRTAP6-2Q3LI66 62 aa5.33□□□□□ -1.56
CLN6-212ENST00000636020 SVIPQ8NHG7 77 aa5.33□□□□□ -1.56
CLN6-212ENST00000636020 KRTAP9-4Q9BYQ2 154 aa5.33□□□□□ -1.56
CLN6-212ENST00000636020 KRTAP5-1Q6L8H4 278 aa5.31□□□□□ -1.56
CLN6-212ENST00000636020 KRTAP15-1Q3LI76 137 aa5.28□□□□□ -1.56
CLN6-212ENST00000636020 KRTAP19-4Q3LI73 84 aa5.24□□□□□ -1.57
CLN6-212ENST00000636020 LCE3CQ5T5A8 94 aa5.09□□□□□ -1.59
CLN6-212ENST00000636020 MT3P25713 68 aa4.96□□□□□ -1.62
CLN6-212ENST00000636020 KRTAP9-6A8MVA2 160 aa4.86□□□□□ -1.63
CLN6-212ENST00000636020 LCE1EQ5T753 118 aa4.77□□□□□ -1.65
CLN6-212ENST00000636020 KRTAP4-2Q9BYR5 136 aa4.6□□□□□ -1.67
CLN6-212ENST00000636020 LUZP6Q538Z0 58 aa4.56□□□□□ -1.68
CLN6-212ENST00000636020 LCE1BQ5T7P3 118 aa4.54□□□□□ -1.68
CLN6-212ENST00000636020 KRTAP4-12Q9BQ66 201 aa4.47□□□□□ -1.69
CLN6-212ENST00000636020 LCE1CQ5T751 118 aa4.42□□□□□ -1.7
CLN6-212ENST00000636020 NDUFAF8A1L188 74 aa4.35□□□□□ -1.71
CLN6-212ENST00000636020 KRTAP5-11Q6L8G4 156 aa4.26□□□□□ -1.73
CLN6-212ENST00000636020 PHGR1C9JFL3 82 aa4.18□□□□□ -1.74
CLN6-212ENST00000636020 LCE1FQ5T754 118 aa4.17□□□□□ -1.74
CLN6-212ENST00000636020 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.92□□□□□ -1.78
CLN6-212ENST00000636020 H3BS24 57 aa3.87□□□□□ -1.79
CLN6-212ENST00000636020 LCE3DQ9BYE3 92 aa3.76□□□□□ -1.81
CLN6-212ENST00000636020 A0A0A0MQY5 61 aa3.75□□□□□ -1.81
CLN6-212ENST00000636020 LCE3EQ5T5B0 92 aa3.64□□□□□ -1.83
CLN6-212ENST00000636020 MUC19Q7Z5P9 8384 aa3.62□□□□□ -1.83
CLN6-212ENST00000636020 INE1O15225 51 aa3.6□□□□□ -1.83
CLN6-212ENST00000636020 KRTAP21-2Q3LI59 83 aa3.58□□□□□ -1.84
CLN6-212ENST00000636020 KRTAP4-4Q9BYR3 166 aa3.41□□□□□ -1.86
CLN6-212ENST00000636020 KRTAP21-1Q3LI58 79 aa3.19□□□□□ -1.9
CLN6-212ENST00000636020 PRM1P04553 51 aa3.1□□□□□ -1.91
CLN6-212ENST00000636020 MUC16Q8WXI7 14507 aa2.55□□□□□ -2
Retrieved 78 of 20,778 RNA–protein pairs in 123.2 ms