RNA–Protein interactions for RNA: ENST00000635841.1

XIST-211, X inactive specific transcript, humanhuman

TSL 5 BASIC

Gene XIST, Length 1,734 nt, Biotype lincRNA, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XIST-211ENST00000635841 KRTAP10-7P60409 375 aaPredicted RBP3.53□□□□□ -1.85
XIST-211ENST00000635841 KRTAP10-12P60413 245 aa3.49□□□□□ -1.85
XIST-211ENST00000635841 MACF1Q9UPN3 7388 aaKnown RBP3.48□□□□□ -1.85
XIST-211ENST00000635841 SYNE2Q8WXH0 6885 aaKnown RBP3.47□□□□□ -1.85
XIST-211ENST00000635841 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.44□□□□□ -1.86
XIST-211ENST00000635841 LCE3AQ5TA76 89 aa3.42□□□□□ -1.86
XIST-211ENST00000635841 PP632Q6XCG6 107 aa3.4□□□□□ -1.87
XIST-211ENST00000635841 KMT2DO14686 5537 aa3.38□□□□□ -1.87
XIST-211ENST00000635841 KRTAP8-1Q8IUC2 63 aa3.36□□□□□ -1.87
XIST-211ENST00000635841 KRTAP19-5Q3LI72 72 aa3.31□□□□□ -1.88
XIST-211ENST00000635841 NDUFAF8A1L188 74 aa3.3□□□□□ -1.88
XIST-211ENST00000635841 KRTAP12-3P60328 96 aa3.29□□□□□ -1.88
XIST-211ENST00000635841 KRTAP19-7Q3SYF9 63 aa3.27□□□□□ -1.89
XIST-211ENST00000635841 SPRR2FQ96RM1 72 aa3.25□□□□□ -1.89
XIST-211ENST00000635841 MT1EP04732 61 aa3.23□□□□□ -1.89
XIST-211ENST00000635841 KRTAP5-9P26371 169 aa3.23□□□□□ -1.89
XIST-211ENST00000635841 KRTAP6-3Q3LI67 103 aa3.23□□□□□ -1.89
XIST-211ENST00000635841 LUZP6Q538Z0 58 aa3.21□□□□□ -1.9
XIST-211ENST00000635841 MUC12Q9UKN1 5478 aa3.21□□□□□ -1.9
XIST-211ENST00000635841 MDN1Q9NU22 5596 aa3.16□□□□□ -1.9
XIST-211ENST00000635841 MT1LQ93083 61 aa3.16□□□□□ -1.9
XIST-211ENST00000635841 NEBP20929 6669 aa3.14□□□□□ -1.91
XIST-211ENST00000635841 KRTAP19-3Q7Z4W3 81 aa3.13□□□□□ -1.91
XIST-211ENST00000635841 SPRR2EP22531 72 aa3.11□□□□□ -1.91
XIST-211ENST00000635841 SPRR2BP35325 72 aa3.11□□□□□ -1.91
XIST-211ENST00000635841 SPRR2AP35326 72 aa3.11□□□□□ -1.91
XIST-211ENST00000635841 LCE1AQ5T7P2 110 aa3.1□□□□□ -1.91
XIST-211ENST00000635841 MT1GP13640 62 aa3.1□□□□□ -1.91
XIST-211ENST00000635841 KRTAP5-11Q6L8G4 156 aa3.08□□□□□ -1.92
XIST-211ENST00000635841 LCE3CQ5T5A8 94 aa3.07□□□□□ -1.92
XIST-211ENST00000635841 MT1MQ8N339 61 aa3.05□□□□□ -1.92
XIST-211ENST00000635841 SPRR2DP22532 72 aa3.01□□□□□ -1.93
XIST-211ENST00000635841 KRTAP4-3Q9BYR4 195 aa2.98□□□□□ -1.93
XIST-211ENST00000635841 KRTAP20-1Q3LI63 56 aa2.96□□□□□ -1.94
XIST-211ENST00000635841 SPRR5A0A1B0GTR4 108 aa2.94□□□□□ -1.94
XIST-211ENST00000635841 KRTAP5-4Q6L8H1 288 aa2.93□□□□□ -1.94
XIST-211ENST00000635841 KRTAP5-1Q6L8H4 278 aa2.91□□□□□ -1.94
XIST-211ENST00000635841 DSTQ03001 7570 aaKnown RBP2.91□□□□□ -1.94
XIST-211ENST00000635841 MT3P25713 68 aa2.9□□□□□ -1.94
XIST-211ENST00000635841 KRTAP2-3P0C7H8 128 aa2.89□□□□□ -1.95
XIST-211ENST00000635841 KRTAP2-4Q9BYR9 128 aa2.89□□□□□ -1.95
XIST-211ENST00000635841 KRTAP9-6A8MVA2 160 aa2.88□□□□□ -1.95
XIST-211ENST00000635841 KRTAP4-4Q9BYR3 166 aa2.85□□□□□ -1.95
XIST-211ENST00000635841 KRTAP2-2Q9BYT5 123 aa2.85□□□□□ -1.95
XIST-211ENST00000635841 LCE1EQ5T753 118 aa2.83□□□□□ -1.96
XIST-211ENST00000635841 KRTAP2-1Q9BYU5 128 aa2.81□□□□□ -1.96
XIST-211ENST00000635841 KRTAP5-5Q701N2 237 aaPredicted RBP2.75□□□□□ -1.97
XIST-211ENST00000635841 HMCN1Q96RW7 5635 aa2.75□□□□□ -1.97
XIST-211ENST00000635841 MT1AP04731 61 aa2.68□□□□□ -1.98
XIST-211ENST00000635841 KRTAP6-1Q3LI64 71 aa2.66□□□□□ -1.98
XIST-211ENST00000635841 LCE1FQ5T754 118 aa2.65□□□□□ -1.99
XIST-211ENST00000635841 SYNE1Q8NF91 8797 aaKnown RBP2.63□□□□□ -1.99
XIST-211ENST00000635841 INE1O15225 51 aa2.62□□□□□ -1.99
XIST-211ENST00000635841 KRTAP5-2Q701N4 177 aa2.62□□□□□ -1.99
XIST-211ENST00000635841 KRTAP12-4P60329 112 aa2.61□□□□□ -1.99
XIST-211ENST00000635841 MT4P47944 62 aa2.6□□□□□ -1.99
XIST-211ENST00000635841 KRTAP20-2Q3LI61 65 aa2.51□□□□□ -2.01
XIST-211ENST00000635841 GPR98Q8WXG9 6306 aa2.49□□□□□ -2.01
XIST-211ENST00000635841 KRTAP6-2Q3LI66 62 aa2.47□□□□□ -2.01
XIST-211ENST00000635841 KRTAP5-8O75690 187 aa2.42□□□□□ -2.02
XIST-211ENST00000635841 OBSCNQ5VST9 7968 aa2.4□□□□□ -2.02
XIST-211ENST00000635841 AHNAK2Q8IVF2 5795 aa2.4□□□□□ -2.03
XIST-211ENST00000635841 KRTAP5-10Q6L8G5 202 aa2.3□□□□□ -2.04
XIST-211ENST00000635841 LCE3DQ9BYE3 92 aa2.29□□□□□ -2.04
XIST-211ENST00000635841 LCE3EQ5T5B0 92 aa2.25□□□□□ -2.05
XIST-211ENST00000635841 KRTAP5-7Q6L8G8 165 aa2.17□□□□□ -2.06
XIST-211ENST00000635841 MUC5ACP98088 5654 aa2.06□□□□□ -2.08
XIST-211ENST00000635841 LCE1BQ5T7P3 118 aa2.02□□□□□ -2.09
XIST-211ENST00000635841 LCE1CQ5T751 118 aa1.99□□□□□ -2.09
XIST-211ENST00000635841 MUC5BQ9HC84 5762 aaPredicted RBP1.98□□□□□ -2.09
XIST-211ENST00000635841 AHNAKQ09666 5890 aaKnown RBP1.92□□□□□ -2.1
XIST-211ENST00000635841 PRM1P04553 51 aa1.88□□□□□ -2.11
XIST-211ENST00000635841 KRTAP21-2Q3LI59 83 aa1.74□□□□□ -2.13
XIST-211ENST00000635841 PHGR1C9JFL3 82 aa1.51□□□□□ -2.17
XIST-211ENST00000635841 MUC19Q7Z5P9 8384 aa1.5□□□□□ -2.17
XIST-211ENST00000635841 KRTAP21-1Q3LI58 79 aa1.12□□□□□ -2.23
XIST-211ENST00000635841 MUC16Q8WXI7 14507 aa1.02□□□□□ -2.25
Retrieved 77 of 20,778 RNA–protein pairs in 10.2 ms