RNA–Protein interactions for RNA: ENST00000635675.2

LINC00339-210, long intergenic non-protein coding RNA 339, humanhuman

TSL 5 BASIC

Gene LINC00339, Length 1,404 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-210ENST00000635675 KRTAP8-1Q8IUC2 63 aa3.86□□□□□ -1.79
LINC00339-210ENST00000635675 MUC12Q9UKN1 5478 aa3.84□□□□□ -1.8
LINC00339-210ENST00000635675 SPRR2FQ96RM1 72 aa3.82□□□□□ -1.8
LINC00339-210ENST00000635675 ROMO1P60602 79 aa3.79□□□□□ -1.8
LINC00339-210ENST00000635675 C10orf95Q9H7T3 257 aa3.79□□□□□ -1.8
LINC00339-210ENST00000635675 MDN1Q9NU22 5596 aa3.78□□□□□ -1.8
LINC00339-210ENST00000635675 SPRR2EP22531 72 aa3.73□□□□□ -1.81
LINC00339-210ENST00000635675 SPRR2BP35325 72 aa3.73□□□□□ -1.81
LINC00339-210ENST00000635675 SPRR2AP35326 72 aa3.73□□□□□ -1.81
LINC00339-210ENST00000635675 LCE1AQ5T7P2 110 aa3.72□□□□□ -1.81
LINC00339-210ENST00000635675 PRAC1Q96KF2 57 aa3.7□□□□□ -1.82
LINC00339-210ENST00000635675 TNP1P09430 55 aa3.68□□□□□ -1.82
LINC00339-210ENST00000635675 KTN1-AS1Q86SY8 53 aa3.67□□□□□ -1.82
LINC00339-210ENST00000635675 KRTAP20-1Q3LI63 56 aa3.66□□□□□ -1.82
LINC00339-210ENST00000635675 KRTAP19-7Q3SYF9 63 aa3.66□□□□□ -1.82
LINC00339-210ENST00000635675 KRTAP25-1Q3LHN0 102 aa3.64□□□□□ -1.83
LINC00339-210ENST00000635675 KRTAP2-3P0C7H8 128 aa3.62□□□□□ -1.83
LINC00339-210ENST00000635675 KRTAP2-4Q9BYR9 128 aa3.62□□□□□ -1.83
LINC00339-210ENST00000635675 MT1EP04732 61 aa3.61□□□□□ -1.83
LINC00339-210ENST00000635675 SPRR2DP22532 72 aa3.61□□□□□ -1.83
LINC00339-210ENST00000635675 KRTAP19-5Q3LI72 72 aa3.6□□□□□ -1.83
LINC00339-210ENST00000635675 KRTAP15-1Q3LI76 137 aa3.58□□□□□ -1.84
LINC00339-210ENST00000635675 LCE3AQ5TA76 89 aa3.58□□□□□ -1.84
LINC00339-210ENST00000635675 KRTAP19-3Q7Z4W3 81 aa3.55□□□□□ -1.84
LINC00339-210ENST00000635675 KRTAP2-2Q9BYT5 123 aa3.52□□□□□ -1.85
LINC00339-210ENST00000635675 KRTAP2-1Q9BYU5 128 aa3.52□□□□□ -1.85
LINC00339-210ENST00000635675 MT1GP13640 62 aa3.49□□□□□ -1.85
LINC00339-210ENST00000635675 MT1LQ93083 61 aa3.48□□□□□ -1.85
LINC00339-210ENST00000635675 PP632Q6XCG6 107 aa3.47□□□□□ -1.85
LINC00339-210ENST00000635675 KRTAP12-3P60328 96 aa3.44□□□□□ -1.86
LINC00339-210ENST00000635675 MT1MQ8N339 61 aa3.43□□□□□ -1.86
LINC00339-210ENST00000635675 A0A0A0MQY5 61 aa3.4□□□□□ -1.87
LINC00339-210ENST00000635675 DSTQ03001 7570 aaKnown RBP3.36□□□□□ -1.87
LINC00339-210ENST00000635675 KRTAP4-3Q9BYR4 195 aa3.34□□□□□ -1.88
LINC00339-210ENST00000635675 LCE3CQ5T5A8 94 aa3.2□□□□□ -1.9
LINC00339-210ENST00000635675 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.19□□□□□ -1.9
LINC00339-210ENST00000635675 KRTAP5-4Q6L8H1 288 aa3.19□□□□□ -1.9
LINC00339-210ENST00000635675 MT4P47944 62 aa3.14□□□□□ -1.91
LINC00339-210ENST00000635675 KRTAP5-5Q701N2 237 aaPredicted RBP3.14□□□□□ -1.91
LINC00339-210ENST00000635675 KRTAP5-11Q6L8G4 156 aa3.11□□□□□ -1.91
LINC00339-210ENST00000635675 GPR98Q8WXG9 6306 aa3.11□□□□□ -1.91
LINC00339-210ENST00000635675 HMCN1Q96RW7 5635 aa3.09□□□□□ -1.91
LINC00339-210ENST00000635675 SPRR5A0A1B0GTR4 108 aa3.03□□□□□ -1.92
LINC00339-210ENST00000635675 KRTAP9-6A8MVA2 160 aa3.02□□□□□ -1.93
LINC00339-210ENST00000635675 KRTAP12-4P60329 112 aa3.01□□□□□ -1.93
LINC00339-210ENST00000635675 KRTAP20-2Q3LI61 65 aa2.99□□□□□ -1.93
LINC00339-210ENST00000635675 SYNE1Q8NF91 8797 aaKnown RBP2.97□□□□□ -1.93
LINC00339-210ENST00000635675 MT1AP04731 61 aa2.95□□□□□ -1.94
LINC00339-210ENST00000635675 LUZP6Q538Z0 58 aa2.95□□□□□ -1.94
LINC00339-210ENST00000635675 KRTAP6-1Q3LI64 71 aa2.93□□□□□ -1.94
LINC00339-210ENST00000635675 AHNAK2Q8IVF2 5795 aa2.93□□□□□ -1.94
LINC00339-210ENST00000635675 MT3P25713 68 aa2.93□□□□□ -1.94
LINC00339-210ENST00000635675 NDUFAF8A1L188 74 aa2.88□□□□□ -1.95
LINC00339-210ENST00000635675 KRTAP5-10Q6L8G5 202 aa2.87□□□□□ -1.95
LINC00339-210ENST00000635675 LCE1EQ5T753 118 aa2.83□□□□□ -1.96
LINC00339-210ENST00000635675 KRTAP5-2Q701N4 177 aa2.83□□□□□ -1.96
LINC00339-210ENST00000635675 KRTAP5-1Q6L8H4 278 aa2.81□□□□□ -1.96
LINC00339-210ENST00000635675 KRTAP6-2Q3LI66 62 aa2.77□□□□□ -1.97
LINC00339-210ENST00000635675 KRTAP5-7Q6L8G8 165 aa2.74□□□□□ -1.97
LINC00339-210ENST00000635675 KRTAP4-4Q9BYR3 166 aa2.7□□□□□ -1.98
LINC00339-210ENST00000635675 KRTAP5-8O75690 187 aa2.6□□□□□ -1.99
LINC00339-210ENST00000635675 OBSCNQ5VST9 7968 aa2.55□□□□□ -2
LINC00339-210ENST00000635675 LCE1FQ5T754 118 aa2.51□□□□□ -2.01
LINC00339-210ENST00000635675 AHNAKQ09666 5890 aaKnown RBP2.43□□□□□ -2.02
LINC00339-210ENST00000635675 MUC5ACP98088 5654 aa2.41□□□□□ -2.02
LINC00339-210ENST00000635675 MUC5BQ9HC84 5762 aaPredicted RBP2.37□□□□□ -2.03
LINC00339-210ENST00000635675 LCE3DQ9BYE3 92 aa2.35□□□□□ -2.03
LINC00339-210ENST00000635675 INE1O15225 51 aa2.3□□□□□ -2.04
LINC00339-210ENST00000635675 LCE3EQ5T5B0 92 aa2.29□□□□□ -2.04
LINC00339-210ENST00000635675 LCE1CQ5T751 118 aa2.28□□□□□ -2.04
LINC00339-210ENST00000635675 LCE1BQ5T7P3 118 aa2.28□□□□□ -2.04
LINC00339-210ENST00000635675 PRM1P04553 51 aa2.01□□□□□ -2.09
LINC00339-210ENST00000635675 KRTAP21-2Q3LI59 83 aa1.94□□□□□ -2.1
LINC00339-210ENST00000635675 PHGR1C9JFL3 82 aa1.76□□□□□ -2.13
LINC00339-210ENST00000635675 MUC19Q7Z5P9 8384 aa1.59□□□□□ -2.15
LINC00339-210ENST00000635675 KRTAP21-1Q3LI58 79 aa1.25□□□□□ -2.21
LINC00339-210ENST00000635675 MUC16Q8WXI7 14507 aa1.14□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 51.8 ms