RNA–Protein interactions for RNA: ENST00000635625.1

PTPN11-205, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene PTPN11, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-205ENST00000635625 SSPOA2VEC9 5147 aa5.06□□□□□ -1.6
PTPN11-205ENST00000635625 SPRR5A0A1B0GTR4 108 aa5.01□□□□□ -1.61
PTPN11-205ENST00000635625 KRTAP10-5P60370 271 aa5□□□□□ -1.61
PTPN11-205ENST00000635625 MT1XP80297 61 aa5□□□□□ -1.61
PTPN11-205ENST00000635625 LCE3AQ5TA76 89 aa5□□□□□ -1.61
PTPN11-205ENST00000635625 PRO2289Q9P1D8 64 aa4.99□□□□□ -1.61
PTPN11-205ENST00000635625 KRTAP8-1Q8IUC2 63 aa4.97□□□□□ -1.61
PTPN11-205ENST00000635625 KRTAP10-12P60413 245 aa4.92□□□□□ -1.62
PTPN11-205ENST00000635625 FCGBPQ9Y6R7 5405 aaPredicted RBP4.89□□□□□ -1.63
PTPN11-205ENST00000635625 KRTAP12-3P60328 96 aa4.82□□□□□ -1.64
PTPN11-205ENST00000635625 MACF1Q9UPN3 7388 aaKnown RBP4.8□□□□□ -1.64
PTPN11-205ENST00000635625 KRTAP10-7P60409 375 aaPredicted RBP4.79□□□□□ -1.64
PTPN11-205ENST00000635625 SYNE2Q8WXH0 6885 aaKnown RBP4.79□□□□□ -1.64
PTPN11-205ENST00000635625 KRTAP19-6Q3LI70 58 aa4.68□□□□□ -1.66
PTPN11-205ENST00000635625 LCE1EQ5T753 118 aa4.66□□□□□ -1.66
PTPN11-205ENST00000635625 KRTAP19-5Q3LI72 72 aa4.6□□□□□ -1.67
PTPN11-205ENST00000635625 KRTAP5-11Q6L8G4 156 aa4.6□□□□□ -1.67
PTPN11-205ENST00000635625 LCE1FQ5T754 118 aa4.59□□□□□ -1.67
PTPN11-205ENST00000635625 LCE3CQ5T5A8 94 aa4.53□□□□□ -1.68
PTPN11-205ENST00000635625 MUC12Q9UKN1 5478 aa4.45□□□□□ -1.7
PTPN11-205ENST00000635625 KRTAP19-7Q3SYF9 63 aa4.45□□□□□ -1.7
PTPN11-205ENST00000635625 NEBP20929 6669 aa4.43□□□□□ -1.7
PTPN11-205ENST00000635625 KMT2DO14686 5537 aa4.42□□□□□ -1.7
PTPN11-205ENST00000635625 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.42□□□□□ -1.7
PTPN11-205ENST00000635625 KRTAP6-3Q3LI67 103 aa4.4□□□□□ -1.7
PTPN11-205ENST00000635625 INE1O15225 51 aa4.37□□□□□ -1.71
PTPN11-205ENST00000635625 MT1EP04732 61 aa4.37□□□□□ -1.71
PTPN11-205ENST00000635625 MDN1Q9NU22 5596 aa4.35□□□□□ -1.71
PTPN11-205ENST00000635625 MT1LQ93083 61 aa4.34□□□□□ -1.71
PTPN11-205ENST00000635625 KRTAP9-6A8MVA2 160 aa4.24□□□□□ -1.73
PTPN11-205ENST00000635625 KRTAP5-9P26371 169 aa4.23□□□□□ -1.73
PTPN11-205ENST00000635625 KRTAP2-3P0C7H8 128 aa4.17□□□□□ -1.74
PTPN11-205ENST00000635625 KRTAP2-4Q9BYR9 128 aa4.17□□□□□ -1.74
PTPN11-205ENST00000635625 KRTAP2-1Q9BYU5 128 aa4.17□□□□□ -1.74
PTPN11-205ENST00000635625 SPRR2FQ96RM1 72 aa4.14□□□□□ -1.75
PTPN11-205ENST00000635625 MT1GP13640 62 aa4.14□□□□□ -1.75
PTPN11-205ENST00000635625 KRTAP19-3Q7Z4W3 81 aa4.13□□□□□ -1.75
PTPN11-205ENST00000635625 MT1MQ8N339 61 aa4.09□□□□□ -1.76
PTPN11-205ENST00000635625 SPRR2EP22531 72 aa4.06□□□□□ -1.76
PTPN11-205ENST00000635625 SPRR2BP35325 72 aa4.06□□□□□ -1.76
PTPN11-205ENST00000635625 SPRR2AP35326 72 aa4.06□□□□□ -1.76
PTPN11-205ENST00000635625 KRTAP20-1Q3LI63 56 aa4.06□□□□□ -1.76
PTPN11-205ENST00000635625 KRTAP4-3Q9BYR4 195 aa3.94□□□□□ -1.78
PTPN11-205ENST00000635625 LCE3EQ5T5B0 92 aa3.93□□□□□ -1.78
PTPN11-205ENST00000635625 SPRR2DP22532 72 aa3.92□□□□□ -1.78
PTPN11-205ENST00000635625 DSTQ03001 7570 aaKnown RBP3.9□□□□□ -1.79
PTPN11-205ENST00000635625 KRTAP5-1Q6L8H4 278 aa3.88□□□□□ -1.79
PTPN11-205ENST00000635625 MT1AP04731 61 aa3.71□□□□□ -1.82
PTPN11-205ENST00000635625 KRTAP4-4Q9BYR3 166 aa3.68□□□□□ -1.82
PTPN11-205ENST00000635625 KRTAP5-4Q6L8H1 288 aa3.66□□□□□ -1.82
PTPN11-205ENST00000635625 KRTAP5-5Q701N2 237 aaPredicted RBP3.65□□□□□ -1.83
PTPN11-205ENST00000635625 KRTAP6-1Q3LI64 71 aa3.62□□□□□ -1.83
PTPN11-205ENST00000635625 KRTAP12-4P60329 112 aa3.58□□□□□ -1.84
PTPN11-205ENST00000635625 GPR98Q8WXG9 6306 aa3.57□□□□□ -1.84
PTPN11-205ENST00000635625 HMCN1Q96RW7 5635 aa3.56□□□□□ -1.84
PTPN11-205ENST00000635625 LCE3DQ9BYE3 92 aa3.47□□□□□ -1.85
PTPN11-205ENST00000635625 MT4P47944 62 aa3.46□□□□□ -1.86
PTPN11-205ENST00000635625 OBSCNQ5VST9 7968 aa3.45□□□□□ -1.86
PTPN11-205ENST00000635625 AHNAK2Q8IVF2 5795 aa3.42□□□□□ -1.86
PTPN11-205ENST00000635625 SYNE1Q8NF91 8797 aaKnown RBP3.31□□□□□ -1.88
PTPN11-205ENST00000635625 KRTAP6-2Q3LI66 62 aa3.27□□□□□ -1.89
PTPN11-205ENST00000635625 KRTAP20-2Q3LI61 65 aa3.23□□□□□ -1.89
PTPN11-205ENST00000635625 KRTAP5-10Q6L8G5 202 aa3.19□□□□□ -1.9
PTPN11-205ENST00000635625 PRM1P04553 51 aa3.15□□□□□ -1.91
PTPN11-205ENST00000635625 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
PTPN11-205ENST00000635625 LCE1BQ5T7P3 118 aa3.08□□□□□ -1.92
PTPN11-205ENST00000635625 KRTAP5-2Q701N4 177 aa3.08□□□□□ -1.92
PTPN11-205ENST00000635625 KRTAP5-7Q6L8G8 165 aa3.03□□□□□ -1.92
PTPN11-205ENST00000635625 KRTAP5-8O75690 187 aa2.84□□□□□ -1.95
PTPN11-205ENST00000635625 AHNAKQ09666 5890 aaKnown RBP2.82□□□□□ -1.96
PTPN11-205ENST00000635625 MUC5BQ9HC84 5762 aaPredicted RBP2.82□□□□□ -1.96
PTPN11-205ENST00000635625 MUC5ACP98088 5654 aa2.79□□□□□ -1.96
PTPN11-205ENST00000635625 MUC19Q7Z5P9 8384 aa2.49□□□□□ -2.01
PTPN11-205ENST00000635625 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
PTPN11-205ENST00000635625 KRTAP21-1Q3LI58 79 aa2.02□□□□□ -2.09
PTPN11-205ENST00000635625 PHGR1C9JFL3 82 aa1.95□□□□□ -2.1
PTPN11-205ENST00000635625 MUC16Q8WXI7 14507 aa1.32□□□□□ -2.2
Retrieved 77 of 20,778 RNA–protein pairs in 13.4 ms