RNA–Protein interactions for RNA: ENST00000634926.1

SMARCB1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 1 (best)

Gene SMARCB1, Length 269 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-208ENST00000634926 KRTAP19-7Q3SYF9 63 aa0.83□□□□□ -2.28
SMARCB1-208ENST00000634926 KRTAP5-10Q6L8G5 202 aa0.83□□□□□ -2.28
SMARCB1-208ENST00000634926 UQCR10Q9UDW1 63 aa0.83□□□□□ -2.28
SMARCB1-208ENST00000634926 INE1O15225 51 aa0.82□□□□□ -2.28
SMARCB1-208ENST00000634926 CYP4F30PQ9H0H9 118 aa0.82□□□□□ -2.28
SMARCB1-208ENST00000634926 TSTD3H0UI37 97 aa0.81□□□□□ -2.28
SMARCB1-208ENST00000634926 MT1EP04732 61 aa0.81□□□□□ -2.28
SMARCB1-208ENST00000634926 S100A1P23297 94 aa0.81□□□□□ -2.28
SMARCB1-208ENST00000634926 TRAV22A0A0B4J277 110 aa0.8□□□□□ -2.28
SMARCB1-208ENST00000634926 M0R143 59 aa0.8□□□□□ -2.28
SMARCB1-208ENST00000634926 KRTAP19-3Q7Z4W3 81 aa0.8□□□□□ -2.28
SMARCB1-208ENST00000634926 TP53AIP1Q9HCN2 124 aa0.8□□□□□ -2.28
SMARCB1-208ENST00000634926 CDC42SE1Q9NRR8 79 aa0.8□□□□□ -2.28
SMARCB1-208ENST00000634926 LOC101927531A0A1B0GV80 90 aa0.79□□□□□ -2.28
SMARCB1-208ENST00000634926 A0A1W2PPM0 123 aa0.79□□□□□ -2.28
SMARCB1-208ENST00000634926 K7EP34 96 aa0.79□□□□□ -2.28
SMARCB1-208ENST00000634926 NDUFC1O43677 76 aa0.78□□□□□ -2.28
SMARCB1-208ENST00000634926 COX7CP15954 63 aa0.78□□□□□ -2.28
SMARCB1-208ENST00000634926 RPS28P62857 69 aaKnown RBP0.78□□□□□ -2.28
SMARCB1-208ENST00000634926 PLAC4Q8WY50 150 aa0.78□□□□□ -2.28
SMARCB1-208ENST00000634926 AHNAKQ09666 5890 aaKnown RBP0.77□□□□□ -2.29
SMARCB1-208ENST00000634926 F8W1H4 67 aa0.77□□□□□ -2.29
SMARCB1-208ENST00000634926 M0QZ58 72 aa0.77□□□□□ -2.29
SMARCB1-208ENST00000634926 SMIM6P0DI80 62 aa0.77□□□□□ -2.29
SMARCB1-208ENST00000634926 MT1MQ8N339 61 aa0.77□□□□□ -2.29
SMARCB1-208ENST00000634926 UBL5Q9BZL1 73 aa0.77□□□□□ -2.29
SMARCB1-208ENST00000634926 MUC5BQ9HC84 5762 aaPredicted RBP0.77□□□□□ -2.29
SMARCB1-208ENST00000634926 ATOX1O00244 68 aa0.76□□□□□ -2.29
SMARCB1-208ENST00000634926 MT1GP13640 62 aa0.76□□□□□ -2.29
SMARCB1-208ENST00000634926 MT4P47944 62 aa0.76□□□□□ -2.29
SMARCB1-208ENST00000634926 MT1LQ93083 61 aa0.76□□□□□ -2.29
SMARCB1-208ENST00000634926 DMAC1Q96GE9 116 aa0.76□□□□□ -2.29
SMARCB1-208ENST00000634926 SPCS1Q9Y6A9 102 aa0.76□□□□□ -2.29
SMARCB1-208ENST00000634926 H0Y9P7 68 aa0.75□□□□□ -2.29
SMARCB1-208ENST00000634926 UQCRQO14949 82 aa0.75□□□□□ -2.29
SMARCB1-208ENST00000634926 SCGB1A1P11684 91 aa0.75□□□□□ -2.29
SMARCB1-208ENST00000634926 KRTAP20-2Q3LI61 65 aa0.75□□□□□ -2.29
SMARCB1-208ENST00000634926 C20orf197Q8N268 126 aa0.75□□□□□ -2.29
SMARCB1-208ENST00000634926 MUC5ACP98088 5654 aa0.74□□□□□ -2.29
SMARCB1-208ENST00000634926 ACYP1P07311 99 aa0.74□□□□□ -2.29
SMARCB1-208ENST00000634926 MIR22HGQ0VDD5 57 aa0.74□□□□□ -2.29
SMARCB1-208ENST00000634926 KRTAP19-5Q3LI72 72 aa0.74□□□□□ -2.29
SMARCB1-208ENST00000634926 ATP5EP2Q5VTU8 51 aa0.74□□□□□ -2.29
SMARCB1-208ENST00000634926 BRK1Q8WUW1 75 aa0.74□□□□□ -2.29
SMARCB1-208ENST00000634926 SYNE1Q8NF91 8797 aaKnown RBP0.73□□□□□ -2.29
SMARCB1-208ENST00000634926 ETDBQ3ZM63 59 aa0.72□□□□□ -2.29
SMARCB1-208ENST00000634926 LINC00208Q96KT6 92 aa0.72□□□□□ -2.29
SMARCB1-208ENST00000634926 LOC105371267A0A1B0GV96 52 aa0.71□□□□□ -2.3
SMARCB1-208ENST00000634926 COL5A1-AS1Q5SY13 56 aa0.71□□□□□ -2.3
SMARCB1-208ENST00000634926 A0A0D9SG42 100 aa0.7□□□□□ -2.3
SMARCB1-208ENST00000634926 MT-ATP8P03928 68 aa0.69□□□□□ -2.3
SMARCB1-208ENST00000634926 LINC00643Q86TS7 51 aa0.69□□□□□ -2.3
SMARCB1-208ENST00000634926 C10orf95Q9H7T3 257 aa0.69□□□□□ -2.3
SMARCB1-208ENST00000634926 MUC16Q8WXI7 14507 aa0.69□□□□□ -2.3
SMARCB1-208ENST00000634926 GTF2H5Q6ZYL4 71 aa0.68□□□□□ -2.3
SMARCB1-208ENST00000634926 ACYP2P14621 99 aa0.66□□□□□ -2.3
SMARCB1-208ENST00000634926 SPTSSBQ8NFR3 76 aa0.66□□□□□ -2.3
SMARCB1-208ENST00000634926 MT1AP04731 61 aa0.64□□□□□ -2.31
SMARCB1-208ENST00000634926 KRTAP6-1Q3LI64 71 aa0.64□□□□□ -2.31
SMARCB1-208ENST00000634926 SPATA8Q6RVD6 105 aa0.64□□□□□ -2.31
SMARCB1-208ENST00000634926 CHKB-CPT1BH3BT56 60 aa0.62□□□□□ -2.31
SMARCB1-208ENST00000634926 TNP1P09430 55 aa0.62□□□□□ -2.31
SMARCB1-208ENST00000634926 KRTAP6-2Q3LI66 62 aa0.61□□□□□ -2.31
SMARCB1-208ENST00000634926 J3QR89 54 aa0.6□□□□□ -2.31
SMARCB1-208ENST00000634926 A0A1B0GV90 55 aa0.59□□□□□ -2.31
SMARCB1-208ENST00000634926 H7BZZ5 65 aa0.58□□□□□ -2.32
SMARCB1-208ENST00000634926 SERP2Q8N6R1 65 aa0.58□□□□□ -2.32
SMARCB1-208ENST00000634926 K7ERU9 68 aa0.57□□□□□ -2.32
SMARCB1-208ENST00000634926 SERP1Q9Y6X1 66 aa0.57□□□□□ -2.32
SMARCB1-208ENST00000634926 CCDC179H3BU77 68 aa0.56□□□□□ -2.32
SMARCB1-208ENST00000634926 A0A1B0GU69 56 aa0.55□□□□□ -2.32
SMARCB1-208ENST00000634926 PRR15LQ9BU68 103 aa0.53□□□□□ -2.32
SMARCB1-208ENST00000634926 LINC01558Q9Y6Z2 57 aa0.53□□□□□ -2.32
SMARCB1-208ENST00000634926 UQCR11O14957 56 aa0.5□□□□□ -2.33
SMARCB1-208ENST00000634926 ATP5EP56381 51 aaPredicted RBP0.49□□□□□ -2.33
SMARCB1-208ENST00000634926 PHGR1C9JFL3 82 aa0.44□□□□□ -2.34
SMARCB1-208ENST00000634926 KRTAP21-1Q3LI58 79 aa0.34□□□□□ -2.36
SMARCB1-208ENST00000634926 PRM1P04553 51 aa0.23□□□□□ -2.37
Retrieved 78 of 20,778 RNA–protein pairs in 115.7 ms