RNA–Protein interactions for RNA: ENST00000630553.1

SOX2-OT-257, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 905 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-257ENST00000630553 KRTAP12-1P59990 96 aa4.09□□□□□ -1.75
SOX2-OT-257ENST00000630553 Q1T7F1 81 aa4.08□□□□□ -1.76
SOX2-OT-257ENST00000630553 V9GYY9 64 aa4.08□□□□□ -1.76
SOX2-OT-257ENST00000630553 A0A0D9SG42 100 aa4.07□□□□□ -1.76
SOX2-OT-257ENST00000630553 KRTAP10-12P60413 245 aa4.06□□□□□ -1.76
SOX2-OT-257ENST00000630553 RPS28P62857 69 aaKnown RBP4.06□□□□□ -1.76
SOX2-OT-257ENST00000630553 UQCR11O14957 56 aa4.04□□□□□ -1.76
SOX2-OT-257ENST00000630553 CAMK2N1Q7Z7J9 78 aa4.04□□□□□ -1.76
SOX2-OT-257ENST00000630553 A8MU10 97 aa4.03□□□□□ -1.76
SOX2-OT-257ENST00000630553 KRTAP10-7P60409 375 aaPredicted RBP4.03□□□□□ -1.76
SOX2-OT-257ENST00000630553 SPINT4Q6UDR6 99 aa4□□□□□ -1.77
SOX2-OT-257ENST00000630553 PSPHP1O15172 72 aa3.95□□□□□ -1.78
SOX2-OT-257ENST00000630553 MIR22HGQ0VDD5 57 aa3.94□□□□□ -1.78
SOX2-OT-257ENST00000630553 HMCN1Q96RW7 5635 aa3.92□□□□□ -1.78
SOX2-OT-257ENST00000630553 AHNAK2Q8IVF2 5795 aa3.9□□□□□ -1.79
SOX2-OT-257ENST00000630553 MT4P47944 62 aa3.89□□□□□ -1.79
SOX2-OT-257ENST00000630553 KRTAP5-10Q6L8G5 202 aa3.88□□□□□ -1.79
SOX2-OT-257ENST00000630553 C10orf95Q9H7T3 257 aa3.88□□□□□ -1.79
SOX2-OT-257ENST00000630553 A6NED7 52 aa3.84□□□□□ -1.79
SOX2-OT-257ENST00000630553 K7ERS5 55 aa3.81□□□□□ -1.8
SOX2-OT-257ENST00000630553 TNP1P09430 55 aa3.81□□□□□ -1.8
SOX2-OT-257ENST00000630553 KRTAP19-7Q3SYF9 63 aa3.81□□□□□ -1.8
SOX2-OT-257ENST00000630553 PRAC1Q96KF2 57 aa3.81□□□□□ -1.8
SOX2-OT-257ENST00000630553 SPRR5A0A1B0GTR4 108 aa3.79□□□□□ -1.8
SOX2-OT-257ENST00000630553 KRTAP5-7Q6L8G8 165 aa3.79□□□□□ -1.8
SOX2-OT-257ENST00000630553 CDC42SE1Q9NRR8 79 aa3.78□□□□□ -1.8
SOX2-OT-257ENST00000630553 KRTAP19-3Q7Z4W3 81 aa3.76□□□□□ -1.81
SOX2-OT-257ENST00000630553 MT1EP04732 61 aa3.75□□□□□ -1.81
SOX2-OT-257ENST00000630553 KRTAP25-1Q3LHN0 102 aa3.74□□□□□ -1.81
SOX2-OT-257ENST00000630553 LCE3AQ5TA76 89 aa3.74□□□□□ -1.81
SOX2-OT-257ENST00000630553 KRTAP19-5Q3LI72 72 aa3.71□□□□□ -1.82
SOX2-OT-257ENST00000630553 PP632Q6XCG6 107 aa3.64□□□□□ -1.83
SOX2-OT-257ENST00000630553 MT1GP13640 62 aa3.62□□□□□ -1.83
SOX2-OT-257ENST00000630553 ROMO1P60602 79 aa3.62□□□□□ -1.83
SOX2-OT-257ENST00000630553 MT1LQ93083 61 aa3.62□□□□□ -1.83
SOX2-OT-257ENST00000630553 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.61□□□□□ -1.83
SOX2-OT-257ENST00000630553 KRTAP5-4Q6L8H1 288 aa3.61□□□□□ -1.83
SOX2-OT-257ENST00000630553 KRTAP12-3P60328 96 aa3.6□□□□□ -1.83
SOX2-OT-257ENST00000630553 MT1MQ8N339 61 aa3.55□□□□□ -1.84
SOX2-OT-257ENST00000630553 KRTAP5-11Q6L8G4 156 aa3.54□□□□□ -1.84
SOX2-OT-257ENST00000630553 BRK1Q8WUW1 75 aa3.51□□□□□ -1.85
SOX2-OT-257ENST00000630553 NDUFAF8A1L188 74 aa3.49□□□□□ -1.85
SOX2-OT-257ENST00000630553 KRTAP4-3Q9BYR4 195 aa3.49□□□□□ -1.85
SOX2-OT-257ENST00000630553 KRTAP20-2Q3LI61 65 aa3.47□□□□□ -1.85
SOX2-OT-257ENST00000630553 MT3P25713 68 aa3.44□□□□□ -1.86
SOX2-OT-257ENST00000630553 LCE1EQ5T753 118 aa3.41□□□□□ -1.86
SOX2-OT-257ENST00000630553 KRTAP12-4P60329 112 aa3.37□□□□□ -1.87
SOX2-OT-257ENST00000630553 AHNAKQ09666 5890 aaKnown RBP3.36□□□□□ -1.87
SOX2-OT-257ENST00000630553 PRO0628Q9UI54 55 aa3.36□□□□□ -1.87
SOX2-OT-257ENST00000630553 LCE3CQ5T5A8 94 aa3.34□□□□□ -1.87
SOX2-OT-257ENST00000630553 LCE1FQ5T754 118 aa3.33□□□□□ -1.88
SOX2-OT-257ENST00000630553 PMAIP1Q13794 54 aa3.31□□□□□ -1.88
SOX2-OT-257ENST00000630553 MUC5ACP98088 5654 aa3.31□□□□□ -1.88
SOX2-OT-257ENST00000630553 KRTAP5-5Q701N2 237 aaPredicted RBP3.3□□□□□ -1.88
SOX2-OT-257ENST00000630553 MUC5BQ9HC84 5762 aaPredicted RBP3.29□□□□□ -1.88
SOX2-OT-257ENST00000630553 SYNE1Q8NF91 8797 aaKnown RBP3.26□□□□□ -1.89
SOX2-OT-257ENST00000630553 KRTAP5-8O75690 187 aa3.22□□□□□ -1.89
SOX2-OT-257ENST00000630553 KRTAP9-6A8MVA2 160 aa3.17□□□□□ -1.9
SOX2-OT-257ENST00000630553 LUZP6Q538Z0 58 aa3.14□□□□□ -1.91
SOX2-OT-257ENST00000630553 KRTAP5-1Q6L8H4 278 aa3.13□□□□□ -1.91
SOX2-OT-257ENST00000630553 OBSCNQ5VST9 7968 aa3.13□□□□□ -1.91
SOX2-OT-257ENST00000630553 KTN1-AS1Q86SY8 53 aa3.11□□□□□ -1.91
SOX2-OT-257ENST00000630553 MT1AP04731 61 aa3.09□□□□□ -1.91
SOX2-OT-257ENST00000630553 KRTAP5-2Q701N4 177 aa3.07□□□□□ -1.92
SOX2-OT-257ENST00000630553 KRTAP6-1Q3LI64 71 aa3.04□□□□□ -1.92
SOX2-OT-257ENST00000630553 KRTAP4-4Q9BYR3 166 aa3□□□□□ -1.93
SOX2-OT-257ENST00000630553 KRTAP6-2Q3LI66 62 aa2.92□□□□□ -1.94
SOX2-OT-257ENST00000630553 LCE3EQ5T5B0 92 aa2.8□□□□□ -1.96
SOX2-OT-257ENST00000630553 LCE1BQ5T7P3 118 aa2.54□□□□□ -2
SOX2-OT-257ENST00000630553 LCE3DQ9BYE3 92 aa2.44□□□□□ -2.02
SOX2-OT-257ENST00000630553 LCE1CQ5T751 118 aa2.4□□□□□ -2.03
SOX2-OT-257ENST00000630553 PHGR1C9JFL3 82 aa2.33□□□□□ -2.04
SOX2-OT-257ENST00000630553 INE1O15225 51 aa2.14□□□□□ -2.07
SOX2-OT-257ENST00000630553 KRTAP21-2Q3LI59 83 aa2.02□□□□□ -2.09
SOX2-OT-257ENST00000630553 MUC19Q7Z5P9 8384 aa1.93□□□□□ -2.1
SOX2-OT-257ENST00000630553 PRM1P04553 51 aa1.84□□□□□ -2.11
SOX2-OT-257ENST00000630553 KRTAP21-1Q3LI58 79 aa1.76□□□□□ -2.13
SOX2-OT-257ENST00000630553 MUC16Q8WXI7 14507 aa1.29□□□□□ -2.2
Retrieved 78 of 20,778 RNA–protein pairs in 81.2 ms