RNA–Protein interactions for RNA: ENST00000629830.2

SOX2-OT-254, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 680 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-254ENST00000629830 KRTAP2-3P0C7H8 128 aa5.07□□□□□ -1.6
SOX2-OT-254ENST00000629830 SPRR2DP22532 72 aa5.07□□□□□ -1.6
SOX2-OT-254ENST00000629830 KRTAP2-4Q9BYR9 128 aa5.07□□□□□ -1.6
SOX2-OT-254ENST00000629830 MT1EP04732 61 aa5.05□□□□□ -1.6
SOX2-OT-254ENST00000629830 TNP1P09430 55 aa5.04□□□□□ -1.6
SOX2-OT-254ENST00000629830 KRTAP19-5Q3LI72 72 aa5.02□□□□□ -1.61
SOX2-OT-254ENST00000629830 RPS28P62857 69 aaKnown RBP5.01□□□□□ -1.61
SOX2-OT-254ENST00000629830 LCE3AQ5TA76 89 aa4.99□□□□□ -1.61
SOX2-OT-254ENST00000629830 KRTAP19-4Q3LI73 84 aa4.98□□□□□ -1.61
SOX2-OT-254ENST00000629830 LCE5AQ5TCM9 118 aa4.96□□□□□ -1.62
SOX2-OT-254ENST00000629830 KRTAP19-3Q7Z4W3 81 aa4.96□□□□□ -1.62
SOX2-OT-254ENST00000629830 A6NED7 52 aa4.94□□□□□ -1.62
SOX2-OT-254ENST00000629830 K7ERS5 55 aa4.93□□□□□ -1.62
SOX2-OT-254ENST00000629830 KRTAP2-2Q9BYT5 123 aa4.92□□□□□ -1.62
SOX2-OT-254ENST00000629830 KRTAP2-1Q9BYU5 128 aa4.92□□□□□ -1.62
SOX2-OT-254ENST00000629830 MT1LQ93083 61 aa4.86□□□□□ -1.63
SOX2-OT-254ENST00000629830 KRTAP25-1Q3LHN0 102 aa4.85□□□□□ -1.63
SOX2-OT-254ENST00000629830 MT1GP13640 62 aa4.84□□□□□ -1.63
SOX2-OT-254ENST00000629830 KRTAP12-3P60328 96 aa4.79□□□□□ -1.64
SOX2-OT-254ENST00000629830 PP632Q6XCG6 107 aa4.79□□□□□ -1.64
SOX2-OT-254ENST00000629830 MT1MQ8N339 61 aa4.79□□□□□ -1.64
SOX2-OT-254ENST00000629830 KRTAP23-1A1A580 65 aa4.76□□□□□ -1.65
SOX2-OT-254ENST00000629830 SVIPQ8NHG7 77 aa4.76□□□□□ -1.65
SOX2-OT-254ENST00000629830 CDC42SE1Q9NRR8 79 aa4.75□□□□□ -1.65
SOX2-OT-254ENST00000629830 DSTQ03001 7570 aaKnown RBP4.72□□□□□ -1.65
SOX2-OT-254ENST00000629830 KRTAP4-3Q9BYR4 195 aa4.69□□□□□ -1.66
SOX2-OT-254ENST00000629830 ROMO1P60602 79 aa4.67□□□□□ -1.66
SOX2-OT-254ENST00000629830 LCE4AQ5TA78 99 aa4.58□□□□□ -1.68
SOX2-OT-254ENST00000629830 KRTAP15-1Q3LI76 137 aa4.53□□□□□ -1.68
SOX2-OT-254ENST00000629830 KRTAP5-4Q6L8H1 288 aa4.47□□□□□ -1.69
SOX2-OT-254ENST00000629830 MT4P47944 62 aa4.43□□□□□ -1.7
SOX2-OT-254ENST00000629830 LCE3CQ5T5A8 94 aa4.43□□□□□ -1.7
SOX2-OT-254ENST00000629830 BRK1Q8WUW1 75 aa4.43□□□□□ -1.7
SOX2-OT-254ENST00000629830 KRTAP5-5Q701N2 237 aaPredicted RBP4.39□□□□□ -1.71
SOX2-OT-254ENST00000629830 HMCN1Q96RW7 5635 aa4.34□□□□□ -1.72
SOX2-OT-254ENST00000629830 KRTAP9-6A8MVA2 160 aa4.21□□□□□ -1.74
SOX2-OT-254ENST00000629830 KRTAP20-2Q3LI61 65 aa4.2□□□□□ -1.74
SOX2-OT-254ENST00000629830 KRTAP12-4P60329 112 aa4.19□□□□□ -1.74
SOX2-OT-254ENST00000629830 SPRR5A0A1B0GTR4 108 aa4.18□□□□□ -1.74
SOX2-OT-254ENST00000629830 PMAIP1Q13794 54 aa4.16□□□□□ -1.74
SOX2-OT-254ENST00000629830 GPR98Q8WXG9 6306 aa4.14□□□□□ -1.75
SOX2-OT-254ENST00000629830 MT1AP04731 61 aa4.12□□□□□ -1.75
SOX2-OT-254ENST00000629830 KRTAP6-1Q3LI64 71 aa4.1□□□□□ -1.75
SOX2-OT-254ENST00000629830 SYNE1Q8NF91 8797 aaKnown RBP4.09□□□□□ -1.75
SOX2-OT-254ENST00000629830 A0A0A0MQY5 61 aa4.08□□□□□ -1.76
SOX2-OT-254ENST00000629830 AHNAK2Q8IVF2 5795 aa4.08□□□□□ -1.76
SOX2-OT-254ENST00000629830 KRTAP5-10Q6L8G5 202 aa4.05□□□□□ -1.76
SOX2-OT-254ENST00000629830 PRAC1Q96KF2 57 aa4.01□□□□□ -1.77
SOX2-OT-254ENST00000629830 PRO0628Q9UI54 55 aa3.99□□□□□ -1.77
SOX2-OT-254ENST00000629830 KRTAP5-2Q701N4 177 aa3.95□□□□□ -1.78
SOX2-OT-254ENST00000629830 KRTAP6-2Q3LI66 62 aa3.88□□□□□ -1.79
SOX2-OT-254ENST00000629830 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.87□□□□□ -1.79
SOX2-OT-254ENST00000629830 KRTAP5-7Q6L8G8 165 aa3.86□□□□□ -1.79
SOX2-OT-254ENST00000629830 KTN1-AS1Q86SY8 53 aa3.79□□□□□ -1.8
SOX2-OT-254ENST00000629830 MT3P25713 68 aa3.75□□□□□ -1.81
SOX2-OT-254ENST00000629830 KRTAP5-8O75690 187 aa3.66□□□□□ -1.82
SOX2-OT-254ENST00000629830 OBSCNQ5VST9 7968 aa3.57□□□□□ -1.84
SOX2-OT-254ENST00000629830 KRTAP5-1Q6L8H4 278 aa3.51□□□□□ -1.85
SOX2-OT-254ENST00000629830 KRTAP5-11Q6L8G4 156 aa3.44□□□□□ -1.86
SOX2-OT-254ENST00000629830 LCE1EQ5T753 118 aa3.4□□□□□ -1.87
SOX2-OT-254ENST00000629830 MUC5ACP98088 5654 aa3.36□□□□□ -1.87
SOX2-OT-254ENST00000629830 MUC5BQ9HC84 5762 aaPredicted RBP3.34□□□□□ -1.87
SOX2-OT-254ENST00000629830 NDUFAF8A1L188 74 aa3.31□□□□□ -1.88
SOX2-OT-254ENST00000629830 LUZP6Q538Z0 58 aa3.3□□□□□ -1.88
SOX2-OT-254ENST00000629830 AHNAKQ09666 5890 aaKnown RBP3.28□□□□□ -1.88
SOX2-OT-254ENST00000629830 LCE3DQ9BYE3 92 aa3.22□□□□□ -1.89
SOX2-OT-254ENST00000629830 KRTAP4-4Q9BYR3 166 aa3.21□□□□□ -1.9
SOX2-OT-254ENST00000629830 LCE1BQ5T7P3 118 aa3.2□□□□□ -1.9
SOX2-OT-254ENST00000629830 LCE1CQ5T751 118 aa3.16□□□□□ -1.9
SOX2-OT-254ENST00000629830 LCE3EQ5T5B0 92 aa3.06□□□□□ -1.92
SOX2-OT-254ENST00000629830 LCE1FQ5T754 118 aa2.95□□□□□ -1.94
SOX2-OT-254ENST00000629830 KRTAP21-2Q3LI59 83 aa2.7□□□□□ -1.98
SOX2-OT-254ENST00000629830 PHGR1C9JFL3 82 aa2.46□□□□□ -2.02
SOX2-OT-254ENST00000629830 PRM1P04553 51 aa2.41□□□□□ -2.02
SOX2-OT-254ENST00000629830 INE1O15225 51 aa2.27□□□□□ -2.05
SOX2-OT-254ENST00000629830 MUC19Q7Z5P9 8384 aa2.19□□□□□ -2.06
SOX2-OT-254ENST00000629830 KRTAP21-1Q3LI58 79 aa1.77□□□□□ -2.13
SOX2-OT-254ENST00000629830 MUC16Q8WXI7 14507 aa1.56□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 52.6 ms