RNA–Protein interactions for RNA: ENST00000629378.2

SPTAN1-219, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 2

Gene SPTAN1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-219ENST00000629378 SPRR2BP35325 72 aa3.74□□□□□ -1.81
SPTAN1-219ENST00000629378 SPRR2AP35326 72 aa3.74□□□□□ -1.81
SPTAN1-219ENST00000629378 KRTAP2-4Q9BYR9 128 aa3.74□□□□□ -1.81
SPTAN1-219ENST00000629378 KRTAP4-9Q9BYQ8 210 aa3.73□□□□□ -1.81
SPTAN1-219ENST00000629378 KTN1-AS1Q86SY8 53 aa3.72□□□□□ -1.81
SPTAN1-219ENST00000629378 C10orf95Q9H7T3 257 aa3.72□□□□□ -1.81
SPTAN1-219ENST00000629378 PRO2289Q9P1D8 64 aa3.72□□□□□ -1.81
SPTAN1-219ENST00000629378 KRTAP8-1Q8IUC2 63 aa3.7□□□□□ -1.82
SPTAN1-219ENST00000629378 KRTAP4-2Q9BYR5 136 aa3.7□□□□□ -1.82
SPTAN1-219ENST00000629378 LCE1AQ5T7P2 110 aa3.68□□□□□ -1.82
SPTAN1-219ENST00000629378 PRAC1Q96KF2 57 aa3.66□□□□□ -1.82
SPTAN1-219ENST00000629378 KRTAP15-1Q3LI76 137 aa3.64□□□□□ -1.83
SPTAN1-219ENST00000629378 LCE5AQ5TCM9 118 aa3.64□□□□□ -1.83
SPTAN1-219ENST00000629378 KRTAP10-7P60409 375 aaPredicted RBP3.63□□□□□ -1.83
SPTAN1-219ENST00000629378 KRTAP25-1Q3LHN0 102 aa3.62□□□□□ -1.83
SPTAN1-219ENST00000629378 TNP1P09430 55 aa3.61□□□□□ -1.83
SPTAN1-219ENST00000629378 SPRR2DP22532 72 aa3.61□□□□□ -1.83
SPTAN1-219ENST00000629378 KRTAP2-2Q9BYT5 123 aa3.61□□□□□ -1.83
SPTAN1-219ENST00000629378 KRTAP2-1Q9BYU5 128 aa3.61□□□□□ -1.83
SPTAN1-219ENST00000629378 KRTAP10-12P60413 245 aa3.58□□□□□ -1.84
SPTAN1-219ENST00000629378 KRTAP4-11Q9BYQ6 195 aa3.56□□□□□ -1.84
SPTAN1-219ENST00000629378 A0A0A0MQY5 61 aa3.51□□□□□ -1.85
SPTAN1-219ENST00000629378 KRTAP5-3Q6L8H2 238 aa3.51□□□□□ -1.85
SPTAN1-219ENST00000629378 PP632Q6XCG6 107 aa3.49□□□□□ -1.85
SPTAN1-219ENST00000629378 LCE3AQ5TA76 89 aa3.46□□□□□ -1.86
SPTAN1-219ENST00000629378 KRTAP19-7Q3SYF9 63 aa3.39□□□□□ -1.87
SPTAN1-219ENST00000629378 DSTQ03001 7570 aaKnown RBP3.37□□□□□ -1.87
SPTAN1-219ENST00000629378 MT1EP04732 61 aa3.35□□□□□ -1.87
SPTAN1-219ENST00000629378 KRTAP19-3Q7Z4W3 81 aa3.33□□□□□ -1.88
SPTAN1-219ENST00000629378 KRTAP12-3P60328 96 aa3.32□□□□□ -1.88
SPTAN1-219ENST00000629378 KRTAP19-5Q3LI72 72 aa3.32□□□□□ -1.88
SPTAN1-219ENST00000629378 GPR98Q8WXG9 6306 aa3.3□□□□□ -1.88
SPTAN1-219ENST00000629378 MT1GP13640 62 aa3.24□□□□□ -1.89
SPTAN1-219ENST00000629378 MT4P47944 62 aa3.2□□□□□ -1.9
SPTAN1-219ENST00000629378 MT1MQ8N339 61 aa3.2□□□□□ -1.9
SPTAN1-219ENST00000629378 KRTAP4-3Q9BYR4 195 aa3.2□□□□□ -1.9
SPTAN1-219ENST00000629378 MT1LQ93083 61 aa3.19□□□□□ -1.9
SPTAN1-219ENST00000629378 HMCN1Q96RW7 5635 aa3.16□□□□□ -1.9
SPTAN1-219ENST00000629378 AHNAK2Q8IVF2 5795 aa3.12□□□□□ -1.91
SPTAN1-219ENST00000629378 LCE3CQ5T5A8 94 aa3.1□□□□□ -1.91
SPTAN1-219ENST00000629378 KRTAP5-4Q6L8H1 288 aa3.09□□□□□ -1.91
SPTAN1-219ENST00000629378 SPRR5A0A1B0GTR4 108 aa3.07□□□□□ -1.92
SPTAN1-219ENST00000629378 KRTAP5-10Q6L8G5 202 aa3.03□□□□□ -1.92
SPTAN1-219ENST00000629378 LUZP6Q538Z0 58 aa2.98□□□□□ -1.93
SPTAN1-219ENST00000629378 KRTAP20-2Q3LI61 65 aa2.94□□□□□ -1.94
SPTAN1-219ENST00000629378 KRTAP5-5Q701N2 237 aaPredicted RBP2.94□□□□□ -1.94
SPTAN1-219ENST00000629378 KRTAP9-6A8MVA2 160 aa2.92□□□□□ -1.94
SPTAN1-219ENST00000629378 NDUFAF8A1L188 74 aa2.91□□□□□ -1.94
SPTAN1-219ENST00000629378 KRTAP5-7Q6L8G8 165 aa2.91□□□□□ -1.94
SPTAN1-219ENST00000629378 KRTAP12-4P60329 112 aa2.86□□□□□ -1.95
SPTAN1-219ENST00000629378 SYNE1Q8NF91 8797 aaKnown RBP2.83□□□□□ -1.96
SPTAN1-219ENST00000629378 MT3P25713 68 aa2.8□□□□□ -1.96
SPTAN1-219ENST00000629378 KRTAP6-1Q3LI64 71 aa2.73□□□□□ -1.97
SPTAN1-219ENST00000629378 MT1AP04731 61 aa2.7□□□□□ -1.98
SPTAN1-219ENST00000629378 KRTAP5-2Q701N4 177 aa2.69□□□□□ -1.98
SPTAN1-219ENST00000629378 KRTAP5-8O75690 187 aa2.62□□□□□ -1.99
SPTAN1-219ENST00000629378 KRTAP6-2Q3LI66 62 aa2.62□□□□□ -1.99
SPTAN1-219ENST00000629378 LCE1FQ5T754 118 aa2.61□□□□□ -1.99
SPTAN1-219ENST00000629378 OBSCNQ5VST9 7968 aa2.56□□□□□ -2
SPTAN1-219ENST00000629378 AHNAKQ09666 5890 aaKnown RBP2.56□□□□□ -2
SPTAN1-219ENST00000629378 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.55□□□□□ -2
SPTAN1-219ENST00000629378 MUC5BQ9HC84 5762 aaPredicted RBP2.53□□□□□ -2
SPTAN1-219ENST00000629378 MUC5ACP98088 5654 aa2.53□□□□□ -2
SPTAN1-219ENST00000629378 KRTAP5-1Q6L8H4 278 aa2.45□□□□□ -2.02
SPTAN1-219ENST00000629378 LCE1EQ5T753 118 aa2.43□□□□□ -2.02
SPTAN1-219ENST00000629378 INE1O15225 51 aa2.39□□□□□ -2.03
SPTAN1-219ENST00000629378 KRTAP5-11Q6L8G4 156 aa2.37□□□□□ -2.03
SPTAN1-219ENST00000629378 LCE3DQ9BYE3 92 aa2.33□□□□□ -2.04
SPTAN1-219ENST00000629378 LCE3EQ5T5B0 92 aa2.26□□□□□ -2.05
SPTAN1-219ENST00000629378 LCE1BQ5T7P3 118 aa2.2□□□□□ -2.06
SPTAN1-219ENST00000629378 KRTAP4-4Q9BYR3 166 aa2.12□□□□□ -2.07
SPTAN1-219ENST00000629378 LCE1CQ5T751 118 aa2.11□□□□□ -2.07
SPTAN1-219ENST00000629378 PRM1P04553 51 aa1.97□□□□□ -2.09
SPTAN1-219ENST00000629378 KRTAP21-2Q3LI59 83 aa1.79□□□□□ -2.12
SPTAN1-219ENST00000629378 PHGR1C9JFL3 82 aa1.77□□□□□ -2.13
SPTAN1-219ENST00000629378 MUC19Q7Z5P9 8384 aa1.58□□□□□ -2.16
SPTAN1-219ENST00000629378 KRTAP21-1Q3LI58 79 aa1.31□□□□□ -2.2
SPTAN1-219ENST00000629378 MUC16Q8WXI7 14507 aa1.12□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 13.6 ms