RNA–Protein interactions for RNA: ENST00000628810.1

SOX2-OT-249, SOX2 overlapping transcript, humanhuman

TSL 5 BASIC

Gene SOX2-OT, Length 618 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-249ENST00000628810 C10orf95Q9H7T3 257 aa3.88□□□□□ -1.79
SOX2-OT-249ENST00000628810 SYNE2Q8WXH0 6885 aaKnown RBP3.86□□□□□ -1.79
SOX2-OT-249ENST00000628810 KRTAP6-3Q3LI67 103 aa3.86□□□□□ -1.79
SOX2-OT-249ENST00000628810 KMT2DO14686 5537 aa3.83□□□□□ -1.8
SOX2-OT-249ENST00000628810 KRTAP5-9P26371 169 aa3.83□□□□□ -1.8
SOX2-OT-249ENST00000628810 TNP1P09430 55 aa3.81□□□□□ -1.8
SOX2-OT-249ENST00000628810 KRTAP8-1Q8IUC2 63 aa3.81□□□□□ -1.8
SOX2-OT-249ENST00000628810 PRAC1Q96KF2 57 aa3.79□□□□□ -1.8
SOX2-OT-249ENST00000628810 KRTAP25-1Q3LHN0 102 aa3.76□□□□□ -1.81
SOX2-OT-249ENST00000628810 BRK1Q8WUW1 75 aa3.76□□□□□ -1.81
SOX2-OT-249ENST00000628810 ROMO1P60602 79 aa3.73□□□□□ -1.81
SOX2-OT-249ENST00000628810 SPRR2FQ96RM1 72 aa3.73□□□□□ -1.81
SOX2-OT-249ENST00000628810 LCE3AQ5TA76 89 aa3.71□□□□□ -1.82
SOX2-OT-249ENST00000628810 KRTAP19-7Q3SYF9 63 aa3.7□□□□□ -1.82
SOX2-OT-249ENST00000628810 KRTAP5-1Q6L8H4 278 aa3.7□□□□□ -1.82
SOX2-OT-249ENST00000628810 MUC12Q9UKN1 5478 aa3.67□□□□□ -1.82
SOX2-OT-249ENST00000628810 KRTAP9-6A8MVA2 160 aa3.67□□□□□ -1.82
SOX2-OT-249ENST00000628810 MDN1Q9NU22 5596 aa3.65□□□□□ -1.82
SOX2-OT-249ENST00000628810 MT1EP04732 61 aa3.65□□□□□ -1.83
SOX2-OT-249ENST00000628810 KRTAP19-5Q3LI72 72 aa3.65□□□□□ -1.83
SOX2-OT-249ENST00000628810 NEBP20929 6669 aa3.63□□□□□ -1.83
SOX2-OT-249ENST00000628810 LCE1FQ5T754 118 aa3.61□□□□□ -1.83
SOX2-OT-249ENST00000628810 SPRR2EP22531 72 aa3.6□□□□□ -1.83
SOX2-OT-249ENST00000628810 SPRR2BP35325 72 aa3.6□□□□□ -1.83
SOX2-OT-249ENST00000628810 SPRR2AP35326 72 aa3.6□□□□□ -1.83
SOX2-OT-249ENST00000628810 NDUFAF8A1L188 74 aa3.58□□□□□ -1.84
SOX2-OT-249ENST00000628810 KRTAP12-3P60328 96 aa3.57□□□□□ -1.84
SOX2-OT-249ENST00000628810 KRTAP5-4Q6L8H1 288 aa3.57□□□□□ -1.84
SOX2-OT-249ENST00000628810 PP632Q6XCG6 107 aa3.57□□□□□ -1.84
SOX2-OT-249ENST00000628810 PRO0628Q9UI54 55 aa3.57□□□□□ -1.84
SOX2-OT-249ENST00000628810 PMAIP1Q13794 54 aa3.55□□□□□ -1.84
SOX2-OT-249ENST00000628810 KRTAP19-3Q7Z4W3 81 aa3.55□□□□□ -1.84
SOX2-OT-249ENST00000628810 MT1LQ93083 61 aa3.53□□□□□ -1.84
SOX2-OT-249ENST00000628810 KRTAP4-4Q9BYR3 166 aa3.52□□□□□ -1.85
SOX2-OT-249ENST00000628810 MT1GP13640 62 aa3.49□□□□□ -1.85
SOX2-OT-249ENST00000628810 SPRR2DP22532 72 aa3.48□□□□□ -1.85
SOX2-OT-249ENST00000628810 MT1MQ8N339 61 aa3.44□□□□□ -1.86
SOX2-OT-249ENST00000628810 KRTAP20-1Q3LI63 56 aa3.42□□□□□ -1.86
SOX2-OT-249ENST00000628810 LCE3CQ5T5A8 94 aa3.42□□□□□ -1.86
SOX2-OT-249ENST00000628810 KRTAP2-3P0C7H8 128 aa3.41□□□□□ -1.86
SOX2-OT-249ENST00000628810 KRTAP2-4Q9BYR9 128 aa3.41□□□□□ -1.86
SOX2-OT-249ENST00000628810 KTN1-AS1Q86SY8 53 aa3.35□□□□□ -1.87
SOX2-OT-249ENST00000628810 KRTAP4-3Q9BYR4 195 aa3.32□□□□□ -1.88
SOX2-OT-249ENST00000628810 KRTAP2-1Q9BYU5 128 aa3.32□□□□□ -1.88
SOX2-OT-249ENST00000628810 DSTQ03001 7570 aaKnown RBP3.28□□□□□ -1.88
SOX2-OT-249ENST00000628810 OBSCNQ5VST9 7968 aa3.23□□□□□ -1.89
SOX2-OT-249ENST00000628810 KRTAP5-5Q701N2 237 aaPredicted RBP3.17□□□□□ -1.9
SOX2-OT-249ENST00000628810 LCE3EQ5T5B0 92 aa3.1□□□□□ -1.91
SOX2-OT-249ENST00000628810 SPRR5A0A1B0GTR4 108 aa3.08□□□□□ -1.92
SOX2-OT-249ENST00000628810 MT1AP04731 61 aa3□□□□□ -1.93
SOX2-OT-249ENST00000628810 MT4P47944 62 aa3□□□□□ -1.93
SOX2-OT-249ENST00000628810 HMCN1Q96RW7 5635 aa2.99□□□□□ -1.93
SOX2-OT-249ENST00000628810 KRTAP12-4P60329 112 aa2.96□□□□□ -1.94
SOX2-OT-249ENST00000628810 KRTAP6-1Q3LI64 71 aa2.96□□□□□ -1.94
SOX2-OT-249ENST00000628810 KRTAP20-2Q3LI61 65 aa2.93□□□□□ -1.94
SOX2-OT-249ENST00000628810 KRTAP5-2Q701N4 177 aa2.92□□□□□ -1.94
SOX2-OT-249ENST00000628810 SYNE1Q8NF91 8797 aaKnown RBP2.91□□□□□ -1.94
SOX2-OT-249ENST00000628810 LUZP6Q538Z0 58 aa2.77□□□□□ -1.97
SOX2-OT-249ENST00000628810 KRTAP6-2Q3LI66 62 aa2.76□□□□□ -1.97
SOX2-OT-249ENST00000628810 LCE1CQ5T751 118 aa2.76□□□□□ -1.97
SOX2-OT-249ENST00000628810 LCE1BQ5T7P3 118 aa2.76□□□□□ -1.97
SOX2-OT-249ENST00000628810 AHNAK2Q8IVF2 5795 aa2.74□□□□□ -1.97
SOX2-OT-249ENST00000628810 KRTAP5-10Q6L8G5 202 aa2.7□□□□□ -1.98
SOX2-OT-249ENST00000628810 GPR98Q8WXG9 6306 aa2.7□□□□□ -1.98
SOX2-OT-249ENST00000628810 KRTAP5-7Q6L8G8 165 aa2.55□□□□□ -2
SOX2-OT-249ENST00000628810 KRTAP5-8O75690 187 aa2.51□□□□□ -2.01
SOX2-OT-249ENST00000628810 LCE3DQ9BYE3 92 aa2.44□□□□□ -2.02
SOX2-OT-249ENST00000628810 MUC5ACP98088 5654 aa2.37□□□□□ -2.03
SOX2-OT-249ENST00000628810 MUC5BQ9HC84 5762 aaPredicted RBP2.24□□□□□ -2.05
SOX2-OT-249ENST00000628810 MUC19Q7Z5P9 8384 aa2.2□□□□□ -2.06
SOX2-OT-249ENST00000628810 INE1O15225 51 aa2.18□□□□□ -2.06
SOX2-OT-249ENST00000628810 AHNAKQ09666 5890 aaKnown RBP2.16□□□□□ -2.06
SOX2-OT-249ENST00000628810 KRTAP21-2Q3LI59 83 aa1.96□□□□□ -2.1
SOX2-OT-249ENST00000628810 PRM1P04553 51 aa1.91□□□□□ -2.1
SOX2-OT-249ENST00000628810 PHGR1C9JFL3 82 aa1.75□□□□□ -2.13
SOX2-OT-249ENST00000628810 KRTAP21-1Q3LI58 79 aa1.17□□□□□ -2.22
SOX2-OT-249ENST00000628810 MUC16Q8WXI7 14507 aa1.1□□□□□ -2.23
Retrieved 77 of 20,778 RNA–protein pairs in 39.3 ms