RNA–Protein interactions for RNA: ENST00000628597.1

SCARNA4.1-201, small Cajal body-specific RNA 4, humanhuman

BASIC

Gene SCARNA4, Length 123 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA4.1-201ENST00000628597 LINC01545Q5VT33 79 aa0.21□□□□□ -2.38
SCARNA4.1-201ENST00000628597 H3BT86 120 aa0.2□□□□□ -2.38
SCARNA4.1-201ENST00000628597 ATOX1O00244 68 aa0.19□□□□□ -2.38
SCARNA4.1-201ENST00000628597 SPATA8Q6RVD6 105 aa0.19□□□□□ -2.38
SCARNA4.1-201ENST00000628597 HSBP1L1C9JCN9 74 aa0.18□□□□□ -2.38
SCARNA4.1-201ENST00000628597 SYS1-DBNDD2H3BUS1 97 aa0.18□□□□□ -2.38
SCARNA4.1-201ENST00000628597 COX6CP09669 75 aa0.18□□□□□ -2.38
SCARNA4.1-201ENST00000628597 C14orf132Q9NPU4 83 aa0.17□□□□□ -2.38
SCARNA4.1-201ENST00000628597 H0Y9P7 68 aa0.16□□□□□ -2.38
SCARNA4.1-201ENST00000628597 H7BZZ5 65 aa0.16□□□□□ -2.38
SCARNA4.1-201ENST00000628597 DMAC1Q96GE9 116 aa0.16□□□□□ -2.38
SCARNA4.1-201ENST00000628597 CHKB-CPT1BH3BT56 60 aa0.15□□□□□ -2.39
SCARNA4.1-201ENST00000628597 INE1O15225 51 aa0.15□□□□□ -2.39
SCARNA4.1-201ENST00000628597 CLLU1Q5K131 121 aa0.15□□□□□ -2.39
SCARNA4.1-201ENST00000628597 PRO1854Q9UHT4 67 aa0.15□□□□□ -2.39
SCARNA4.1-201ENST00000628597 SPCS1Q9Y6A9 102 aa0.15□□□□□ -2.39
SCARNA4.1-201ENST00000628597 HIST1H2BLQ99880 126 aa0.14□□□□□ -2.39
SCARNA4.1-201ENST00000628597 HIST1H2BOP23527 126 aa0.13□□□□□ -2.39
SCARNA4.1-201ENST00000628597 HIST1H2BBP33778 126 aa0.13□□□□□ -2.39
SCARNA4.1-201ENST00000628597 HIST1H2BDP58876 126 aa0.13□□□□□ -2.39
SCARNA4.1-201ENST00000628597 HIST1H2BCP62807 126 aa0.13□□□□□ -2.39
SCARNA4.1-201ENST00000628597 HIST2H2BEQ16778 126 aa0.13□□□□□ -2.39
SCARNA4.1-201ENST00000628597 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.13□□□□□ -2.39
SCARNA4.1-201ENST00000628597 HIST1H2BHQ93079 126 aa0.13□□□□□ -2.39
SCARNA4.1-201ENST00000628597 HIST1H2BNQ99877 126 aa0.13□□□□□ -2.39
SCARNA4.1-201ENST00000628597 HIST1H2BMQ99879 126 aa0.13□□□□□ -2.39
SCARNA4.1-201ENST00000628597 SERP1Q9Y6X1 66 aa0.12□□□□□ -2.39
SCARNA4.1-201ENST00000628597 UQCRQO14949 82 aa0.11□□□□□ -2.39
SCARNA4.1-201ENST00000628597 HIST3H2BBQ8N257 126 aa0.11□□□□□ -2.39
SCARNA4.1-201ENST00000628597 PMAIP1Q13794 54 aa0.1□□□□□ -2.39
SCARNA4.1-201ENST00000628597 ATOH7Q8N100 152 aa0.09□□□□□ -2.4
SCARNA4.1-201ENST00000628597 TMEM218A2RU14 115 aa0.08□□□□□ -2.4
SCARNA4.1-201ENST00000628597 CDC42SE1Q9NRR8 79 aa0.08□□□□□ -2.4
SCARNA4.1-201ENST00000628597 ATXN8Q156A1 80 aa0.07□□□□□ -2.4
SCARNA4.1-201ENST00000628597 UBL5Q9BZL1 73 aa0.06□□□□□ -2.4
SCARNA4.1-201ENST00000628597 SPATA45Q537H7 98 aa0.05□□□□□ -2.4
SCARNA4.1-201ENST00000628597 RPS28P62857 69 aaKnown RBP0.04□□□□□ -2.4
SCARNA4.1-201ENST00000628597 SERP2Q8N6R1 65 aa0.04□□□□□ -2.4
SCARNA4.1-201ENST00000628597 COX7CP15954 63 aa0.03□□□□□ -2.4
SCARNA4.1-201ENST00000628597 F8W1H4 67 aa0.02□□□□□ -2.41
SCARNA4.1-201ENST00000628597 VAMP8Q9BV40 100 aa0.02□□□□□ -2.41
SCARNA4.1-201ENST00000628597 ROMO1P60602 79 aa0□□□□□ -2.41
SCARNA4.1-201ENST00000628597 K7ERJ3 54 aa-0.02□□□□□ -2.41
SCARNA4.1-201ENST00000628597 TAX1BP3O14907 124 aa-0.02□□□□□ -2.41
SCARNA4.1-201ENST00000628597 COX8AP10176 69 aa-0.04□□□□□ -2.42
SCARNA4.1-201ENST00000628597 DLEU1O43261 78 aa-0.05□□□□□ -2.42
SCARNA4.1-201ENST00000628597 PRR15LQ9BU68 103 aa-0.05□□□□□ -2.42
SCARNA4.1-201ENST00000628597 HIST1H2BKO60814 126 aa-0.09□□□□□ -2.42
SCARNA4.1-201ENST00000628597 HIST1H2BJP06899 126 aa-0.09□□□□□ -2.42
SCARNA4.1-201ENST00000628597 MIR22HGQ0VDD5 57 aa-0.09□□□□□ -2.42
SCARNA4.1-201ENST00000628597 C14orf144Q96I85 54 aa-0.09□□□□□ -2.42
SCARNA4.1-201ENST00000628597 APOC3P02656 99 aa-0.12□□□□□ -2.43
SCARNA4.1-201ENST00000628597 SVBPQ8N300 66 aa-0.13□□□□□ -2.43
SCARNA4.1-201ENST00000628597 A0A1B0GU69 56 aa-0.14□□□□□ -2.43
SCARNA4.1-201ENST00000628597 S100A6P06703 90 aa-0.14□□□□□ -2.43
SCARNA4.1-201ENST00000628597 HSD52Q0P140 79 aa-0.14□□□□□ -2.43
SCARNA4.1-201ENST00000628597 PRM1P04553 51 aa-0.22□□□□□ -2.44
SCARNA4.1-201ENST00000628597 ATP5EP2Q5VTU8 51 aa-0.23□□□□□ -2.45
SCARNA4.1-201ENST00000628597 SMIM20Q8N5G0 67 aa-0.23□□□□□ -2.45
SCARNA4.1-201ENST00000628597 S100A1P23297 94 aa-0.25□□□□□ -2.45
SCARNA4.1-201ENST00000628597 BRK1Q8WUW1 75 aa-0.25□□□□□ -2.45
SCARNA4.1-201ENST00000628597 CCDC179H3BU77 68 aa-0.26□□□□□ -2.45
SCARNA4.1-201ENST00000628597 UQCR11O14957 56 aa-0.32□□□□□ -2.46
SCARNA4.1-201ENST00000628597 SMIM6P0DI80 62 aa-0.33□□□□□ -2.46
SCARNA4.1-201ENST00000628597 M0R143 59 aa-0.34□□□□□ -2.46
SCARNA4.1-201ENST00000628597 UQCR10Q9UDW1 63 aa-0.34□□□□□ -2.46
SCARNA4.1-201ENST00000628597 LINC00643Q86TS7 51 aa-0.39□□□□□ -2.47
SCARNA4.1-201ENST00000628597 J3QR89 54 aa-0.4□□□□□ -2.47
SCARNA4.1-201ENST00000628597 ETDBQ3ZM63 59 aa-0.44□□□□□ -2.48
SCARNA4.1-201ENST00000628597 K7ERU9 68 aa-0.48□□□□□ -2.49
SCARNA4.1-201ENST00000628597 LINC01558Q9Y6Z2 57 aa-0.49□□□□□ -2.49
SCARNA4.1-201ENST00000628597 PYY3Q5JQD4 70 aa-0.52□□□□□ -2.49
SCARNA4.1-201ENST00000628597 COL5A1-AS1Q5SY13 56 aa-0.57□□□□□ -2.5
SCARNA4.1-201ENST00000628597 GTF2H5Q6ZYL4 71 aa-0.57□□□□□ -2.5
SCARNA4.1-201ENST00000628597 ATP5EP56381 51 aaPredicted RBP-0.63□□□□□ -2.51
SCARNA4.1-201ENST00000628597 LOC105371267A0A1B0GV96 52 aa-0.66□□□□□ -2.52
SCARNA4.1-201ENST00000628597 A0A1B0GV90 55 aa-0.85□□□□□ -2.55
Retrieved 77 of 20,778 RNA–protein pairs in 241.4 ms