RNA–Protein interactions for RNA: ENST00000627809.1

SPTAN1-213, Transcript of spectrin alpha, non-erythrocytic 1, humanhuman

TSL 3

Gene SPTAN1, Length 342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTAN1-213ENST00000627809 KRTAP25-1Q3LHN0 102 aa3.04□□□□□ -1.92
SPTAN1-213ENST00000627809 MT1EP04732 61 aa3.03□□□□□ -1.92
SPTAN1-213ENST00000627809 LCE3BQ5TA77 95 aa3.03□□□□□ -1.92
SPTAN1-213ENST00000627809 BRK1Q8WUW1 75 aa3.02□□□□□ -1.93
SPTAN1-213ENST00000627809 ROMO1P60602 79 aa3□□□□□ -1.93
SPTAN1-213ENST00000627809 KRTAP19-5Q3LI72 72 aa2.99□□□□□ -1.93
SPTAN1-213ENST00000627809 LCE3AQ5TA76 89 aa2.99□□□□□ -1.93
SPTAN1-213ENST00000627809 LCE5AQ5TCM9 118 aa2.99□□□□□ -1.93
SPTAN1-213ENST00000627809 DSTQ03001 7570 aaKnown RBP2.95□□□□□ -1.94
SPTAN1-213ENST00000627809 KRTAP23-1A1A580 65 aa2.95□□□□□ -1.94
SPTAN1-213ENST00000627809 KRTAP19-3Q7Z4W3 81 aa2.95□□□□□ -1.94
SPTAN1-213ENST00000627809 KRTAP4-3Q9BYR4 195 aa2.95□□□□□ -1.94
SPTAN1-213ENST00000627809 KRTAP4-9Q9BYQ8 210 aa2.93□□□□□ -1.94
SPTAN1-213ENST00000627809 HMCN1Q96RW7 5635 aa2.9□□□□□ -1.94
SPTAN1-213ENST00000627809 A0A0A0MQY5 61 aa2.9□□□□□ -1.95
SPTAN1-213ENST00000627809 MT1LQ93083 61 aa2.9□□□□□ -1.95
SPTAN1-213ENST00000627809 KRTAP12-3P60328 96 aa2.89□□□□□ -1.95
SPTAN1-213ENST00000627809 PP632Q6XCG6 107 aa2.89□□□□□ -1.95
SPTAN1-213ENST00000627809 MT1MQ8N339 61 aa2.89□□□□□ -1.95
SPTAN1-213ENST00000627809 AHNAK2Q8IVF2 5795 aa2.88□□□□□ -1.95
SPTAN1-213ENST00000627809 KRTAP4-7Q9BYR0 210 aa2.88□□□□□ -1.95
SPTAN1-213ENST00000627809 PMAIP1Q13794 54 aa2.86□□□□□ -1.95
SPTAN1-213ENST00000627809 MT1GP13640 62 aa2.85□□□□□ -1.95
SPTAN1-213ENST00000627809 PRO0628Q9UI54 55 aa2.83□□□□□ -1.96
SPTAN1-213ENST00000627809 LCE1DQ5T752 114 aa2.82□□□□□ -1.96
SPTAN1-213ENST00000627809 KRTAP19-4Q3LI73 84 aa2.79□□□□□ -1.96
SPTAN1-213ENST00000627809 MT4P47944 62 aa2.78□□□□□ -1.96
SPTAN1-213ENST00000627809 KRTAP15-1Q3LI76 137 aa2.78□□□□□ -1.96
SPTAN1-213ENST00000627809 KRTAP4-6Q9BYQ5 205 aa2.76□□□□□ -1.97
SPTAN1-213ENST00000627809 KRTAP5-10Q6L8G5 202 aa2.75□□□□□ -1.97
SPTAN1-213ENST00000627809 KRTAP5-4Q6L8H1 288 aa2.74□□□□□ -1.97
SPTAN1-213ENST00000627809 LOC100996750A0A140TA64 210 aa2.72□□□□□ -1.97
SPTAN1-213ENST00000627809 LCE3CQ5T5A8 94 aa2.69□□□□□ -1.98
SPTAN1-213ENST00000627809 LCE4AQ5TA78 99 aa2.67□□□□□ -1.98
SPTAN1-213ENST00000627809 KRTAP5-5Q701N2 237 aaPredicted RBP2.67□□□□□ -1.98
SPTAN1-213ENST00000627809 PRAC1Q96KF2 57 aa2.67□□□□□ -1.98
SPTAN1-213ENST00000627809 KRTAP5-7Q6L8G8 165 aa2.66□□□□□ -1.98
SPTAN1-213ENST00000627809 KTN1-AS1Q86SY8 53 aa2.66□□□□□ -1.98
SPTAN1-213ENST00000627809 KRTAP20-2Q3LI61 65 aa2.59□□□□□ -1.99
SPTAN1-213ENST00000627809 KRTAP5-3Q6L8H2 238 aa2.56□□□□□ -2
SPTAN1-213ENST00000627809 SYNE1Q8NF91 8797 aaKnown RBP2.55□□□□□ -2
SPTAN1-213ENST00000627809 KRTAP9-6A8MVA2 160 aa2.55□□□□□ -2
SPTAN1-213ENST00000627809 AHNAKQ09666 5890 aaKnown RBP2.52□□□□□ -2.01
SPTAN1-213ENST00000627809 KRTAP6-1Q3LI64 71 aa2.5□□□□□ -2.01
SPTAN1-213ENST00000627809 SPRR5A0A1B0GTR4 108 aa2.49□□□□□ -2.01
SPTAN1-213ENST00000627809 MUC5BQ9HC84 5762 aaPredicted RBP2.47□□□□□ -2.01
SPTAN1-213ENST00000627809 MUC5ACP98088 5654 aa2.44□□□□□ -2.02
SPTAN1-213ENST00000627809 MT1AP04731 61 aa2.43□□□□□ -2.02
SPTAN1-213ENST00000627809 KRTAP12-4P60329 112 aa2.43□□□□□ -2.02
SPTAN1-213ENST00000627809 KRTAP5-2Q701N4 177 aa2.42□□□□□ -2.02
SPTAN1-213ENST00000627809 KRTAP6-2Q3LI66 62 aa2.35□□□□□ -2.03
SPTAN1-213ENST00000627809 KRTAP9-4Q9BYQ2 154 aa2.33□□□□□ -2.04
SPTAN1-213ENST00000627809 KRTAP4-11Q9BYQ6 195 aa2.33□□□□□ -2.04
SPTAN1-213ENST00000627809 KRTAP5-8O75690 187 aa2.31□□□□□ -2.04
SPTAN1-213ENST00000627809 LUZP6Q538Z0 58 aa2.27□□□□□ -2.05
SPTAN1-213ENST00000627809 MT3P25713 68 aa2.22□□□□□ -2.05
SPTAN1-213ENST00000627809 OBSCNQ5VST9 7968 aa2.22□□□□□ -2.05
SPTAN1-213ENST00000627809 KRTAP5-1Q6L8H4 278 aa2.18□□□□□ -2.06
SPTAN1-213ENST00000627809 KRTAP9-9Q9BYP9 154 aa2.16□□□□□ -2.06
SPTAN1-213ENST00000627809 NDUFAF8A1L188 74 aa2.12□□□□□ -2.07
SPTAN1-213ENST00000627809 KRTAP4-12Q9BQ66 201 aa2.11□□□□□ -2.07
SPTAN1-213ENST00000627809 KRTAP4-2Q9BYR5 136 aa2□□□□□ -2.09
SPTAN1-213ENST00000627809 LCE1EQ5T753 118 aa1.99□□□□□ -2.09
SPTAN1-213ENST00000627809 LCE3DQ9BYE3 92 aa1.99□□□□□ -2.09
SPTAN1-213ENST00000627809 LCE1BQ5T7P3 118 aa1.94□□□□□ -2.1
SPTAN1-213ENST00000627809 LCE3EQ5T5B0 92 aa1.91□□□□□ -2.1
SPTAN1-213ENST00000627809 LCE1CQ5T751 118 aa1.85□□□□□ -2.11
SPTAN1-213ENST00000627809 LCE1FQ5T754 118 aa1.77□□□□□ -2.13
SPTAN1-213ENST00000627809 KRTAP5-6Q6L8G9 129 aaPredicted RBP1.7□□□□□ -2.14
SPTAN1-213ENST00000627809 KRTAP5-11Q6L8G4 156 aa1.69□□□□□ -2.14
SPTAN1-213ENST00000627809 INE1O15225 51 aa1.68□□□□□ -2.14
SPTAN1-213ENST00000627809 KRTAP21-2Q3LI59 83 aa1.64□□□□□ -2.15
SPTAN1-213ENST00000627809 KRTAP4-4Q9BYR3 166 aa1.57□□□□□ -2.16
SPTAN1-213ENST00000627809 PHGR1C9JFL3 82 aa1.55□□□□□ -2.16
SPTAN1-213ENST00000627809 PRM1P04553 51 aa1.54□□□□□ -2.16
SPTAN1-213ENST00000627809 MUC19Q7Z5P9 8384 aa1.39□□□□□ -2.19
SPTAN1-213ENST00000627809 KRTAP21-1Q3LI58 79 aa1.15□□□□□ -2.23
SPTAN1-213ENST00000627809 MUC16Q8WXI7 14507 aa0.96□□□□□ -2.26
Retrieved 78 of 20,778 RNA–protein pairs in 11.2 ms