RNA–Protein interactions for RNA: ENST00000626619.2

SOX2-OT-239, SOX2 overlapping transcript, humanhuman

TSL 5

Gene SOX2-OT, Length 660 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-239ENST00000626619 KRTAP19-3Q7Z4W3 81 aa5.07□□□□□ -1.6
SOX2-OT-239ENST00000626619 A0A1B0GU69 56 aa5.04□□□□□ -1.6
SOX2-OT-239ENST00000626619 DSTQ03001 7570 aaKnown RBP5.03□□□□□ -1.6
SOX2-OT-239ENST00000626619 SMIM26A0A096LP01 95 aa4.96□□□□□ -1.62
SOX2-OT-239ENST00000626619 C10orf95Q9H7T3 257 aa4.96□□□□□ -1.62
SOX2-OT-239ENST00000626619 TMEM258P61165 79 aa4.94□□□□□ -1.62
SOX2-OT-239ENST00000626619 LCE3AQ5TA76 89 aa4.94□□□□□ -1.62
SOX2-OT-239ENST00000626619 MT1LQ93083 61 aa4.92□□□□□ -1.62
SOX2-OT-239ENST00000626619 MT1GP13640 62 aa4.9□□□□□ -1.63
SOX2-OT-239ENST00000626619 MT1MQ8N339 61 aa4.9□□□□□ -1.63
SOX2-OT-239ENST00000626619 KRTAP4-3Q9BYR4 195 aa4.89□□□□□ -1.63
SOX2-OT-239ENST00000626619 ATP5EP56381 51 aaPredicted RBP4.88□□□□□ -1.63
SOX2-OT-239ENST00000626619 LINC01558Q9Y6Z2 57 aa4.84□□□□□ -1.63
SOX2-OT-239ENST00000626619 TNP1P09430 55 aa4.83□□□□□ -1.64
SOX2-OT-239ENST00000626619 PP632Q6XCG6 107 aa4.82□□□□□ -1.64
SOX2-OT-239ENST00000626619 PRR15LQ9BU68 103 aa4.81□□□□□ -1.64
SOX2-OT-239ENST00000626619 GPR98Q8WXG9 6306 aa4.79□□□□□ -1.64
SOX2-OT-239ENST00000626619 RPS28P62857 69 aaKnown RBP4.79□□□□□ -1.64
SOX2-OT-239ENST00000626619 MT4P47944 62 aa4.74□□□□□ -1.65
SOX2-OT-239ENST00000626619 HMCN1Q96RW7 5635 aa4.74□□□□□ -1.65
SOX2-OT-239ENST00000626619 KRTAP12-3P60328 96 aa4.7□□□□□ -1.66
SOX2-OT-239ENST00000626619 UQCR11O14957 56 aa4.69□□□□□ -1.66
SOX2-OT-239ENST00000626619 KRTAP5-4Q6L8H1 288 aa4.66□□□□□ -1.66
SOX2-OT-239ENST00000626619 MIR22HGQ0VDD5 57 aa4.62□□□□□ -1.67
SOX2-OT-239ENST00000626619 PSPHP1O15172 72 aa4.58□□□□□ -1.68
SOX2-OT-239ENST00000626619 Q1T7F1 81 aa4.57□□□□□ -1.68
SOX2-OT-239ENST00000626619 V9GYY9 64 aa4.56□□□□□ -1.68
SOX2-OT-239ENST00000626619 AHNAK2Q8IVF2 5795 aa4.55□□□□□ -1.68
SOX2-OT-239ENST00000626619 KRTAP25-1Q3LHN0 102 aa4.54□□□□□ -1.68
SOX2-OT-239ENST00000626619 KRTAP5-5Q701N2 237 aaPredicted RBP4.5□□□□□ -1.69
SOX2-OT-239ENST00000626619 SVIPQ8NHG7 77 aa4.48□□□□□ -1.69
SOX2-OT-239ENST00000626619 KRTAP5-10Q6L8G5 202 aa4.46□□□□□ -1.7
SOX2-OT-239ENST00000626619 K7ERS5 55 aa4.43□□□□□ -1.7
SOX2-OT-239ENST00000626619 KRTAP20-2Q3LI61 65 aa4.42□□□□□ -1.7
SOX2-OT-239ENST00000626619 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.41□□□□□ -1.7
SOX2-OT-239ENST00000626619 A6NED7 52 aa4.35□□□□□ -1.71
SOX2-OT-239ENST00000626619 SYNE1Q8NF91 8797 aaKnown RBP4.33□□□□□ -1.72
SOX2-OT-239ENST00000626619 SPRR5A0A1B0GTR4 108 aa4.32□□□□□ -1.72
SOX2-OT-239ENST00000626619 LCE3CQ5T5A8 94 aa4.32□□□□□ -1.72
SOX2-OT-239ENST00000626619 KRTAP5-11Q6L8G4 156 aa4.3□□□□□ -1.72
SOX2-OT-239ENST00000626619 KRTAP12-4P60329 112 aa4.29□□□□□ -1.72
SOX2-OT-239ENST00000626619 BRK1Q8WUW1 75 aa4.29□□□□□ -1.72
SOX2-OT-239ENST00000626619 CDC42SE1Q9NRR8 79 aa4.27□□□□□ -1.73
SOX2-OT-239ENST00000626619 KRTAP5-7Q6L8G8 165 aa4.25□□□□□ -1.73
SOX2-OT-239ENST00000626619 ROMO1P60602 79 aa4.22□□□□□ -1.73
SOX2-OT-239ENST00000626619 PRO0628Q9UI54 55 aa4.21□□□□□ -1.74
SOX2-OT-239ENST00000626619 LCE1EQ5T753 118 aa4.2□□□□□ -1.74
SOX2-OT-239ENST00000626619 KRTAP9-6A8MVA2 160 aa4.19□□□□□ -1.74
SOX2-OT-239ENST00000626619 KRTAP6-1Q3LI64 71 aa4.19□□□□□ -1.74
SOX2-OT-239ENST00000626619 MT1AP04731 61 aa4.15□□□□□ -1.75
SOX2-OT-239ENST00000626619 KRTAP5-2Q701N4 177 aa4.08□□□□□ -1.76
SOX2-OT-239ENST00000626619 PMAIP1Q13794 54 aa4.07□□□□□ -1.76
SOX2-OT-239ENST00000626619 A0A0A0MQY5 61 aa4.03□□□□□ -1.76
SOX2-OT-239ENST00000626619 MT3P25713 68 aa4.03□□□□□ -1.76
SOX2-OT-239ENST00000626619 KRTAP6-2Q3LI66 62 aa3.99□□□□□ -1.77
SOX2-OT-239ENST00000626619 KRTAP5-8O75690 187 aa3.91□□□□□ -1.78
SOX2-OT-239ENST00000626619 KTN1-AS1Q86SY8 53 aa3.89□□□□□ -1.79
SOX2-OT-239ENST00000626619 OBSCNQ5VST9 7968 aa3.88□□□□□ -1.79
SOX2-OT-239ENST00000626619 PRAC1Q96KF2 57 aa3.79□□□□□ -1.8
SOX2-OT-239ENST00000626619 KRTAP5-1Q6L8H4 278 aa3.78□□□□□ -1.8
SOX2-OT-239ENST00000626619 MUC5BQ9HC84 5762 aaPredicted RBP3.76□□□□□ -1.81
SOX2-OT-239ENST00000626619 MUC5ACP98088 5654 aa3.76□□□□□ -1.81
SOX2-OT-239ENST00000626619 AHNAKQ09666 5890 aaKnown RBP3.74□□□□□ -1.81
SOX2-OT-239ENST00000626619 KRTAP4-4Q9BYR3 166 aa3.62□□□□□ -1.83
SOX2-OT-239ENST00000626619 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
SOX2-OT-239ENST00000626619 LCE1BQ5T7P3 118 aa3.33□□□□□ -1.88
SOX2-OT-239ENST00000626619 LCE1CQ5T751 118 aa3.21□□□□□ -1.9
SOX2-OT-239ENST00000626619 LUZP6Q538Z0 58 aa3.11□□□□□ -1.91
SOX2-OT-239ENST00000626619 LCE3DQ9BYE3 92 aa3.08□□□□□ -1.92
SOX2-OT-239ENST00000626619 NDUFAF8A1L188 74 aa3.07□□□□□ -1.92
SOX2-OT-239ENST00000626619 LCE3EQ5T5B0 92 aa2.89□□□□□ -1.95
SOX2-OT-239ENST00000626619 KRTAP21-2Q3LI59 83 aa2.75□□□□□ -1.97
SOX2-OT-239ENST00000626619 PHGR1C9JFL3 82 aa2.59□□□□□ -1.99
SOX2-OT-239ENST00000626619 INE1O15225 51 aa2.51□□□□□ -2.01
SOX2-OT-239ENST00000626619 MUC19Q7Z5P9 8384 aa2.39□□□□□ -2.03
SOX2-OT-239ENST00000626619 PRM1P04553 51 aa2.2□□□□□ -2.06
SOX2-OT-239ENST00000626619 KRTAP21-1Q3LI58 79 aa1.92□□□□□ -2.1
SOX2-OT-239ENST00000626619 MUC16Q8WXI7 14507 aa1.68□□□□□ -2.14
Retrieved 78 of 20,778 RNA–protein pairs in 75.2 ms