RNA–Protein interactions for RNA: ENST00000626000.1

SNRPA1-216, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 5 BASIC

Gene SNRPA1, Length 539 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-216ENST00000626000 K7ERS5 55 aa5.34□□□□□ -1.55
SNRPA1-216ENST00000626000 TNP1P09430 55 aa5.34□□□□□ -1.55
SNRPA1-216ENST00000626000 PCP4P48539 62 aa5.34□□□□□ -1.55
SNRPA1-216ENST00000626000 KRTAP15-1Q3LI76 137 aa5.33□□□□□ -1.56
SNRPA1-216ENST00000626000 KRTAP2-2Q9BYT5 123 aa5.33□□□□□ -1.56
SNRPA1-216ENST00000626000 KRTAP2-1Q9BYU5 128 aa5.33□□□□□ -1.56
SNRPA1-216ENST00000626000 RPS28P62857 69 aaKnown RBP5.31□□□□□ -1.56
SNRPA1-216ENST00000626000 PSPHP1O15172 72 aa5.3□□□□□ -1.56
SNRPA1-216ENST00000626000 KRTAP23-1A1A580 65 aa5.29□□□□□ -1.56
SNRPA1-216ENST00000626000 SPRR2DP22532 72 aa5.26□□□□□ -1.57
SNRPA1-216ENST00000626000 C10orf95Q9H7T3 257 aa5.26□□□□□ -1.57
SNRPA1-216ENST00000626000 KRTAP19-7Q3SYF9 63 aa5.22□□□□□ -1.57
SNRPA1-216ENST00000626000 A6NED7 52 aa5.2□□□□□ -1.58
SNRPA1-216ENST00000626000 MT1EP04732 61 aa5.19□□□□□ -1.58
SNRPA1-216ENST00000626000 KRTAP25-1Q3LHN0 102 aa5.15□□□□□ -1.59
SNRPA1-216ENST00000626000 KRTAP19-5Q3LI72 72 aa5.14□□□□□ -1.59
SNRPA1-216ENST00000626000 KRTAP19-3Q7Z4W3 81 aa5.14□□□□□ -1.59
SNRPA1-216ENST00000626000 LCE3AQ5TA76 89 aa5.13□□□□□ -1.59
SNRPA1-216ENST00000626000 PP632Q6XCG6 107 aa5.1□□□□□ -1.59
SNRPA1-216ENST00000626000 MT1GP13640 62 aa5.08□□□□□ -1.6
SNRPA1-216ENST00000626000 CDC42SE1Q9NRR8 79 aa5.02□□□□□ -1.61
SNRPA1-216ENST00000626000 KRTAP12-3P60328 96 aa4.99□□□□□ -1.61
SNRPA1-216ENST00000626000 MT1LQ93083 61 aa4.99□□□□□ -1.61
SNRPA1-216ENST00000626000 DSTQ03001 7570 aaKnown RBP4.94□□□□□ -1.62
SNRPA1-216ENST00000626000 MT1MQ8N339 61 aa4.92□□□□□ -1.62
SNRPA1-216ENST00000626000 ROMO1P60602 79 aa4.91□□□□□ -1.62
SNRPA1-216ENST00000626000 GPR98Q8WXG9 6306 aa4.84□□□□□ -1.63
SNRPA1-216ENST00000626000 KRTAP4-3Q9BYR4 195 aa4.7□□□□□ -1.66
SNRPA1-216ENST00000626000 BRK1Q8WUW1 75 aa4.65□□□□□ -1.67
SNRPA1-216ENST00000626000 SVIPQ8NHG7 77 aa4.62□□□□□ -1.67
SNRPA1-216ENST00000626000 LCE3CQ5T5A8 94 aa4.61□□□□□ -1.67
SNRPA1-216ENST00000626000 KRTAP5-4Q6L8H1 288 aa4.61□□□□□ -1.67
SNRPA1-216ENST00000626000 HMCN1Q96RW7 5635 aa4.6□□□□□ -1.67
SNRPA1-216ENST00000626000 MT4P47944 62 aa4.53□□□□□ -1.68
SNRPA1-216ENST00000626000 KRTAP5-5Q701N2 237 aaPredicted RBP4.49□□□□□ -1.69
SNRPA1-216ENST00000626000 AHNAK2Q8IVF2 5795 aa4.46□□□□□ -1.7
SNRPA1-216ENST00000626000 KRTAP12-4P60329 112 aa4.43□□□□□ -1.7
SNRPA1-216ENST00000626000 PMAIP1Q13794 54 aa4.41□□□□□ -1.7
SNRPA1-216ENST00000626000 SPRR5A0A1B0GTR4 108 aa4.4□□□□□ -1.71
SNRPA1-216ENST00000626000 KRTAP5-10Q6L8G5 202 aa4.39□□□□□ -1.71
SNRPA1-216ENST00000626000 KRTAP5-11Q6L8G4 156 aa4.36□□□□□ -1.71
SNRPA1-216ENST00000626000 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.33□□□□□ -1.72
SNRPA1-216ENST00000626000 KRTAP20-2Q3LI61 65 aa4.32□□□□□ -1.72
SNRPA1-216ENST00000626000 KRTAP5-7Q6L8G8 165 aa4.29□□□□□ -1.72
SNRPA1-216ENST00000626000 MT1AP04731 61 aa4.28□□□□□ -1.72
SNRPA1-216ENST00000626000 PRO0628Q9UI54 55 aa4.25□□□□□ -1.73
SNRPA1-216ENST00000626000 SYNE1Q8NF91 8797 aaKnown RBP4.24□□□□□ -1.73
SNRPA1-216ENST00000626000 KRTAP9-6A8MVA2 160 aa4.23□□□□□ -1.73
SNRPA1-216ENST00000626000 KRTAP6-1Q3LI64 71 aa4.17□□□□□ -1.74
SNRPA1-216ENST00000626000 LCE1EQ5T753 118 aa4.11□□□□□ -1.75
SNRPA1-216ENST00000626000 PRAC1Q96KF2 57 aa4.08□□□□□ -1.76
SNRPA1-216ENST00000626000 KRTAP5-2Q701N4 177 aa4.07□□□□□ -1.76
SNRPA1-216ENST00000626000 KTN1-AS1Q86SY8 53 aa4.02□□□□□ -1.77
SNRPA1-216ENST00000626000 KRTAP6-2Q3LI66 62 aa3.97□□□□□ -1.77
SNRPA1-216ENST00000626000 MT3P25713 68 aa3.94□□□□□ -1.78
SNRPA1-216ENST00000626000 KRTAP5-1Q6L8H4 278 aa3.77□□□□□ -1.81
SNRPA1-216ENST00000626000 OBSCNQ5VST9 7968 aa3.77□□□□□ -1.81
SNRPA1-216ENST00000626000 AHNAKQ09666 5890 aaKnown RBP3.77□□□□□ -1.81
SNRPA1-216ENST00000626000 MUC5BQ9HC84 5762 aaPredicted RBP3.76□□□□□ -1.81
SNRPA1-216ENST00000626000 KRTAP5-8O75690 187 aa3.75□□□□□ -1.81
SNRPA1-216ENST00000626000 MUC5ACP98088 5654 aa3.73□□□□□ -1.81
SNRPA1-216ENST00000626000 LCE1FQ5T754 118 aa3.68□□□□□ -1.82
SNRPA1-216ENST00000626000 A0A0A0MQY5 61 aa3.66□□□□□ -1.82
SNRPA1-216ENST00000626000 KRTAP4-4Q9BYR3 166 aa3.64□□□□□ -1.83
SNRPA1-216ENST00000626000 LUZP6Q538Z0 58 aa3.62□□□□□ -1.83
SNRPA1-216ENST00000626000 LCE3DQ9BYE3 92 aa3.38□□□□□ -1.87
SNRPA1-216ENST00000626000 LCE1CQ5T751 118 aa3.32□□□□□ -1.88
SNRPA1-216ENST00000626000 LCE1BQ5T7P3 118 aa3.32□□□□□ -1.88
SNRPA1-216ENST00000626000 LCE3EQ5T5B0 92 aa3.22□□□□□ -1.89
SNRPA1-216ENST00000626000 NDUFAF8A1L188 74 aa3.01□□□□□ -1.93
SNRPA1-216ENST00000626000 KRTAP21-2Q3LI59 83 aa2.76□□□□□ -1.97
SNRPA1-216ENST00000626000 PHGR1C9JFL3 82 aa2.58□□□□□ -2
SNRPA1-216ENST00000626000 INE1O15225 51 aa2.52□□□□□ -2.01
SNRPA1-216ENST00000626000 PRM1P04553 51 aa2.47□□□□□ -2.01
SNRPA1-216ENST00000626000 MUC19Q7Z5P9 8384 aa2.3□□□□□ -2.04
SNRPA1-216ENST00000626000 KRTAP21-1Q3LI58 79 aa2.04□□□□□ -2.08
SNRPA1-216ENST00000626000 MUC16Q8WXI7 14507 aa1.67□□□□□ -2.14
Retrieved 77 of 20,778 RNA–protein pairs in 48.7 ms