RNA–Protein interactions for RNA: ENST00000623529.1

LINC01561-202, Transcript of long intergenic non-protein coding RNA 1561, humanhuman

Gene LINC01561, Length 2,160 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01561-202ENST00000623529 KRTAP10-7P60409 375 aaPredicted RBP4.03□□□□□ -1.76
LINC01561-202ENST00000623529 KRTAP5-9P26371 169 aa3.99□□□□□ -1.77
LINC01561-202ENST00000623529 KRTAP2-2Q9BYT5 123 aa3.98□□□□□ -1.77
LINC01561-202ENST00000623529 KRTAP2-1Q9BYU5 128 aa3.98□□□□□ -1.77
LINC01561-202ENST00000623529 KRTAP10-12P60413 245 aa3.95□□□□□ -1.78
LINC01561-202ENST00000623529 KRTAP4-8A0A0G2JLE6 195 aa3.94□□□□□ -1.78
LINC01561-202ENST00000623529 KRTAP4-8Q9BYQ9 185 aa3.94□□□□□ -1.78
LINC01561-202ENST00000623529 LOC100996750A0A140TA64 210 aa3.9□□□□□ -1.78
LINC01561-202ENST00000623529 KRTAP4-6Q9BYQ5 205 aa3.9□□□□□ -1.78
LINC01561-202ENST00000623529 LCE3AQ5TA76 89 aa3.87□□□□□ -1.79
LINC01561-202ENST00000623529 KRTAP8-1Q8IUC2 63 aa3.85□□□□□ -1.79
LINC01561-202ENST00000623529 SPRR2EP22531 72 aa3.83□□□□□ -1.8
LINC01561-202ENST00000623529 SPRR2BP35325 72 aa3.83□□□□□ -1.8
LINC01561-202ENST00000623529 SPRR2AP35326 72 aa3.83□□□□□ -1.8
LINC01561-202ENST00000623529 KRTAP19-5Q3LI72 72 aa3.76□□□□□ -1.81
LINC01561-202ENST00000623529 KRTAP19-7Q3SYF9 63 aa3.75□□□□□ -1.81
LINC01561-202ENST00000623529 SPRR2FQ96RM1 72 aa3.73□□□□□ -1.81
LINC01561-202ENST00000623529 SPRR2DP22532 72 aa3.72□□□□□ -1.81
LINC01561-202ENST00000623529 KRTAP12-3P60328 96 aa3.7□□□□□ -1.82
LINC01561-202ENST00000623529 LCE1AQ5T7P2 110 aa3.7□□□□□ -1.82
LINC01561-202ENST00000623529 MT1EP04732 61 aa3.66□□□□□ -1.82
LINC01561-202ENST00000623529 LCE3BQ5TA77 95 aa3.66□□□□□ -1.82
LINC01561-202ENST00000623529 KRTAP19-4Q3LI73 84 aa3.58□□□□□ -1.84
LINC01561-202ENST00000623529 MT1LQ93083 61 aa3.58□□□□□ -1.84
LINC01561-202ENST00000623529 KRTAP4-9Q9BYQ8 210 aa3.57□□□□□ -1.84
LINC01561-202ENST00000623529 KRTAP19-3Q7Z4W3 81 aa3.53□□□□□ -1.84
LINC01561-202ENST00000623529 KRTAP4-7Q9BYR0 210 aa3.52□□□□□ -1.85
LINC01561-202ENST00000623529 LCE3CQ5T5A8 94 aa3.51□□□□□ -1.85
LINC01561-202ENST00000623529 DSTQ03001 7570 aaKnown RBP3.51□□□□□ -1.85
LINC01561-202ENST00000623529 LCE5AQ5TCM9 118 aa3.51□□□□□ -1.85
LINC01561-202ENST00000623529 MT1GP13640 62 aa3.49□□□□□ -1.85
LINC01561-202ENST00000623529 AHNAK2Q8IVF2 5795 aa3.49□□□□□ -1.85
LINC01561-202ENST00000623529 HMCN1Q96RW7 5635 aa3.49□□□□□ -1.85
LINC01561-202ENST00000623529 KRTAP5-10Q6L8G5 202 aa3.48□□□□□ -1.85
LINC01561-202ENST00000623529 MT1MQ8N339 61 aa3.45□□□□□ -1.86
LINC01561-202ENST00000623529 KRTAP4-3Q9BYR4 195 aa3.45□□□□□ -1.86
LINC01561-202ENST00000623529 KRTAP5-3Q6L8H2 238 aa3.45□□□□□ -1.86
LINC01561-202ENST00000623529 KRTAP5-7Q6L8G8 165 aa3.43□□□□□ -1.86
LINC01561-202ENST00000623529 LCE1DQ5T752 114 aa3.41□□□□□ -1.86
LINC01561-202ENST00000623529 KRTAP9-6A8MVA2 160 aa3.35□□□□□ -1.87
LINC01561-202ENST00000623529 MT4P47944 62 aa3.29□□□□□ -1.88
LINC01561-202ENST00000623529 LCE4AQ5TA78 99 aa3.25□□□□□ -1.89
LINC01561-202ENST00000623529 LCE1FQ5T754 118 aa3.18□□□□□ -1.9
LINC01561-202ENST00000623529 KRTAP12-4P60329 112 aa3.17□□□□□ -1.9
LINC01561-202ENST00000623529 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
LINC01561-202ENST00000623529 AHNAKQ09666 5890 aaKnown RBP3.15□□□□□ -1.91
LINC01561-202ENST00000623529 KRTAP5-5Q701N2 237 aaPredicted RBP3.14□□□□□ -1.91
LINC01561-202ENST00000623529 SYNE1Q8NF91 8797 aaKnown RBP3.07□□□□□ -1.92
LINC01561-202ENST00000623529 KRTAP5-4Q6L8H1 288 aa3.07□□□□□ -1.92
LINC01561-202ENST00000623529 MT3P25713 68 aa3.04□□□□□ -1.92
LINC01561-202ENST00000623529 KRTAP9-4Q9BYQ2 154 aa3.04□□□□□ -1.92
LINC01561-202ENST00000623529 KRTAP6-1Q3LI64 71 aa3.04□□□□□ -1.92
LINC01561-202ENST00000623529 MT1AP04731 61 aa3.01□□□□□ -1.93
LINC01561-202ENST00000623529 MUC5ACP98088 5654 aa3.01□□□□□ -1.93
LINC01561-202ENST00000623529 MUC5BQ9HC84 5762 aaPredicted RBP2.99□□□□□ -1.93
LINC01561-202ENST00000623529 KRTAP20-2Q3LI61 65 aa2.94□□□□□ -1.94
LINC01561-202ENST00000623529 KRTAP4-2Q9BYR5 136 aa2.94□□□□□ -1.94
LINC01561-202ENST00000623529 KRTAP9-9Q9BYP9 154 aa2.87□□□□□ -1.95
LINC01561-202ENST00000623529 KRTAP4-11Q9BYQ6 195 aa2.83□□□□□ -1.96
LINC01561-202ENST00000623529 KRTAP6-2Q3LI66 62 aa2.81□□□□□ -1.96
LINC01561-202ENST00000623529 LCE3EQ5T5B0 92 aa2.8□□□□□ -1.96
LINC01561-202ENST00000623529 KRTAP5-8O75690 187 aa2.8□□□□□ -1.96
LINC01561-202ENST00000623529 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
LINC01561-202ENST00000623529 OBSCNQ5VST9 7968 aa2.77□□□□□ -1.97
LINC01561-202ENST00000623529 PRM1P04553 51 aa2.74□□□□□ -1.97
LINC01561-202ENST00000623529 KRTAP5-2Q701N4 177 aa2.74□□□□□ -1.97
LINC01561-202ENST00000623529 KRTAP4-12Q9BQ66 201 aa2.53□□□□□ -2
LINC01561-202ENST00000623529 KRTAP5-1Q6L8H4 278 aa2.43□□□□□ -2.02
LINC01561-202ENST00000623529 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.36□□□□□ -2.03
LINC01561-202ENST00000623529 LCE1BQ5T7P3 118 aa2.28□□□□□ -2.04
LINC01561-202ENST00000623529 LCE1CQ5T751 118 aa2.25□□□□□ -2.05
LINC01561-202ENST00000623529 PHGR1C9JFL3 82 aa2.06□□□□□ -2.08
LINC01561-202ENST00000623529 KRTAP21-2Q3LI59 83 aa2□□□□□ -2.09
LINC01561-202ENST00000623529 KRTAP5-11Q6L8G4 156 aa1.99□□□□□ -2.09
LINC01561-202ENST00000623529 MUC19Q7Z5P9 8384 aa1.94□□□□□ -2.1
LINC01561-202ENST00000623529 KRTAP21-1Q3LI58 79 aa1.88□□□□□ -2.11
LINC01561-202ENST00000623529 KRTAP4-4Q9BYR3 166 aa1.88□□□□□ -2.11
LINC01561-202ENST00000623529 MUC16Q8WXI7 14507 aa1.13□□□□□ -2.23
Retrieved 78 of 20,778 RNA–protein pairs in 31.8 ms