RNA–Protein interactions for RNA: ENST00000620770.1

MUC1-229, Transcript of mucin 1, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC1, Length 572 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-229ENST00000620770 KRTAP19-5Q3LI72 72 aa5.03□□□□□ -1.6
MUC1-229ENST00000620770 KRTAP19-7Q3SYF9 63 aa5.03□□□□□ -1.6
MUC1-229ENST00000620770 LCE3BQ5TA77 95 aa5□□□□□ -1.61
MUC1-229ENST00000620770 MT1EP04732 61 aa4.99□□□□□ -1.61
MUC1-229ENST00000620770 KRTAP12-3P60328 96 aa4.88□□□□□ -1.63
MUC1-229ENST00000620770 KRTAP19-3Q7Z4W3 81 aa4.87□□□□□ -1.63
MUC1-229ENST00000620770 KRTAP23-1A1A580 65 aa4.84□□□□□ -1.63
MUC1-229ENST00000620770 LCE5AQ5TCM9 118 aa4.82□□□□□ -1.64
MUC1-229ENST00000620770 MT1LQ93083 61 aa4.82□□□□□ -1.64
MUC1-229ENST00000620770 PP632Q6XCG6 107 aa4.78□□□□□ -1.64
MUC1-229ENST00000620770 MT1GP13640 62 aa4.77□□□□□ -1.65
MUC1-229ENST00000620770 PMAIP1Q13794 54 aa4.76□□□□□ -1.65
MUC1-229ENST00000620770 DSTQ03001 7570 aaKnown RBP4.74□□□□□ -1.65
MUC1-229ENST00000620770 MT1MQ8N339 61 aa4.73□□□□□ -1.65
MUC1-229ENST00000620770 LOC100996750A0A140TA64 210 aa4.68□□□□□ -1.66
MUC1-229ENST00000620770 KRTAP4-6Q9BYQ5 205 aa4.68□□□□□ -1.66
MUC1-229ENST00000620770 PRO0628Q9UI54 55 aa4.68□□□□□ -1.66
MUC1-229ENST00000620770 KRTAP15-1Q3LI76 137 aa4.66□□□□□ -1.66
MUC1-229ENST00000620770 KRTAP4-9Q9BYQ8 210 aa4.64□□□□□ -1.67
MUC1-229ENST00000620770 KRTAP4-7Q9BYR0 210 aa4.64□□□□□ -1.67
MUC1-229ENST00000620770 KRTAP4-3Q9BYR4 195 aa4.64□□□□□ -1.67
MUC1-229ENST00000620770 GPR98Q8WXG9 6306 aa4.64□□□□□ -1.67
MUC1-229ENST00000620770 LCE1DQ5T752 114 aa4.55□□□□□ -1.68
MUC1-229ENST00000620770 PRAC1Q96KF2 57 aa4.55□□□□□ -1.68
MUC1-229ENST00000620770 LCE4AQ5TA78 99 aa4.53□□□□□ -1.68
MUC1-229ENST00000620770 KRTAP19-4Q3LI73 84 aa4.52□□□□□ -1.69
MUC1-229ENST00000620770 LCE3CQ5T5A8 94 aa4.51□□□□□ -1.69
MUC1-229ENST00000620770 MT4P47944 62 aa4.49□□□□□ -1.69
MUC1-229ENST00000620770 HMCN1Q96RW7 5635 aa4.47□□□□□ -1.69
MUC1-229ENST00000620770 KTN1-AS1Q86SY8 53 aa4.41□□□□□ -1.7
MUC1-229ENST00000620770 KRTAP5-4Q6L8H1 288 aa4.4□□□□□ -1.71
MUC1-229ENST00000620770 AHNAK2Q8IVF2 5795 aa4.35□□□□□ -1.71
MUC1-229ENST00000620770 KRTAP5-5Q701N2 237 aaPredicted RBP4.27□□□□□ -1.73
MUC1-229ENST00000620770 KRTAP9-6A8MVA2 160 aa4.26□□□□□ -1.73
MUC1-229ENST00000620770 KRTAP5-10Q6L8G5 202 aa4.26□□□□□ -1.73
MUC1-229ENST00000620770 SVIPQ8NHG7 77 aa4.26□□□□□ -1.73
MUC1-229ENST00000620770 KRTAP4-12Q9BQ66 201 aa4.22□□□□□ -1.73
MUC1-229ENST00000620770 KRTAP20-2Q3LI61 65 aa4.17□□□□□ -1.74
MUC1-229ENST00000620770 SPRR5A0A1B0GTR4 108 aa4.15□□□□□ -1.75
MUC1-229ENST00000620770 H3BS24 57 aa4.15□□□□□ -1.75
MUC1-229ENST00000620770 KRTAP5-3Q6L8H2 238 aa4.15□□□□□ -1.75
MUC1-229ENST00000620770 KRTAP12-4P60329 112 aa4.14□□□□□ -1.75
MUC1-229ENST00000620770 KRTAP5-7Q6L8G8 165 aa4.12□□□□□ -1.75
MUC1-229ENST00000620770 MT1AP04731 61 aa4.1□□□□□ -1.75
MUC1-229ENST00000620770 KRTAP6-1Q3LI64 71 aa4.08□□□□□ -1.76
MUC1-229ENST00000620770 SYNE1Q8NF91 8797 aaKnown RBP4.05□□□□□ -1.76
MUC1-229ENST00000620770 KRTAP9-9Q9BYP9 154 aa4.03□□□□□ -1.76
MUC1-229ENST00000620770 KRTAP9-4Q9BYQ2 154 aa4.03□□□□□ -1.76
MUC1-229ENST00000620770 KRTAP5-2Q701N4 177 aa3.84□□□□□ -1.79
MUC1-229ENST00000620770 KRTAP6-2Q3LI66 62 aa3.83□□□□□ -1.8
MUC1-229ENST00000620770 KRTAP4-11Q9BYQ6 195 aa3.83□□□□□ -1.8
MUC1-229ENST00000620770 LUZP6Q538Z0 58 aa3.75□□□□□ -1.81
MUC1-229ENST00000620770 MT3P25713 68 aa3.73□□□□□ -1.81
MUC1-229ENST00000620770 KRTAP5-8O75690 187 aa3.69□□□□□ -1.82
MUC1-229ENST00000620770 OBSCNQ5VST9 7968 aa3.66□□□□□ -1.82
MUC1-229ENST00000620770 KRTAP4-2Q9BYR5 136 aa3.64□□□□□ -1.83
MUC1-229ENST00000620770 MUC5ACP98088 5654 aa3.6□□□□□ -1.83
MUC1-229ENST00000620770 AHNAKQ09666 5890 aaKnown RBP3.59□□□□□ -1.83
MUC1-229ENST00000620770 MUC5BQ9HC84 5762 aaPredicted RBP3.56□□□□□ -1.84
MUC1-229ENST00000620770 KRTAP5-1Q6L8H4 278 aa3.45□□□□□ -1.86
MUC1-229ENST00000620770 NDUFAF8A1L188 74 aa3.37□□□□□ -1.87
MUC1-229ENST00000620770 LCE3DQ9BYE3 92 aa3.33□□□□□ -1.88
MUC1-229ENST00000620770 LCE1EQ5T753 118 aa3.3□□□□□ -1.88
MUC1-229ENST00000620770 LCE3EQ5T5B0 92 aa3.18□□□□□ -1.9
MUC1-229ENST00000620770 LCE1BQ5T7P3 118 aa3.18□□□□□ -1.9
MUC1-229ENST00000620770 LCE1CQ5T751 118 aa3.08□□□□□ -1.92
MUC1-229ENST00000620770 A0A0A0MQY5 61 aa2.83□□□□□ -1.96
MUC1-229ENST00000620770 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.82□□□□□ -1.96
MUC1-229ENST00000620770 KRTAP5-11Q6L8G4 156 aa2.79□□□□□ -1.96
MUC1-229ENST00000620770 LCE1FQ5T754 118 aa2.73□□□□□ -1.97
MUC1-229ENST00000620770 INE1O15225 51 aa2.71□□□□□ -1.98
MUC1-229ENST00000620770 KRTAP21-2Q3LI59 83 aa2.66□□□□□ -1.98
MUC1-229ENST00000620770 PRM1P04553 51 aa2.62□□□□□ -1.99
MUC1-229ENST00000620770 PHGR1C9JFL3 82 aa2.5□□□□□ -2.01
MUC1-229ENST00000620770 KRTAP4-4Q9BYR3 166 aa2.45□□□□□ -2.02
MUC1-229ENST00000620770 MUC19Q7Z5P9 8384 aa2.26□□□□□ -2.05
MUC1-229ENST00000620770 KRTAP21-1Q3LI58 79 aa1.91□□□□□ -2.1
MUC1-229ENST00000620770 MUC16Q8WXI7 14507 aa1.59□□□□□ -2.15
Retrieved 78 of 20,778 RNA–protein pairs in 182.8 ms