RNA–Protein interactions for RNA: ENST00000620709.4

CD40-207, Transcript of CD40 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD40, Length 1,522 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD40-207ENST00000620709 PRAC1Q96KF2 57 aa6.37□□□□□ -1.39
CD40-207ENST00000620709 KRTAP10-12P60413 245 aa6.35□□□□□ -1.39
CD40-207ENST00000620709 LCE3BQ5TA77 95 aa6.25□□□□□ -1.41
CD40-207ENST00000620709 SVIPQ8NHG7 77 aa6.25□□□□□ -1.41
CD40-207ENST00000620709 KRTAP23-1A1A580 65 aa6.18□□□□□ -1.42
CD40-207ENST00000620709 PP632Q6XCG6 107 aa6.18□□□□□ -1.42
CD40-207ENST00000620709 LCE3AQ5TA76 89 aa6.09□□□□□ -1.43
CD40-207ENST00000620709 DSTQ03001 7570 aaKnown RBP5.99□□□□□ -1.45
CD40-207ENST00000620709 KRTAP19-7Q3SYF9 63 aa5.99□□□□□ -1.45
CD40-207ENST00000620709 MT1EP04732 61 aa5.96□□□□□ -1.46
CD40-207ENST00000620709 LCE5AQ5TCM9 118 aa5.95□□□□□ -1.46
CD40-207ENST00000620709 KRTAP19-3Q7Z4W3 81 aa5.94□□□□□ -1.46
CD40-207ENST00000620709 KRTAP4-9Q9BYQ8 210 aa5.89□□□□□ -1.47
CD40-207ENST00000620709 GPR98Q8WXG9 6306 aa5.87□□□□□ -1.47
CD40-207ENST00000620709 KRTAP12-3P60328 96 aa5.86□□□□□ -1.47
CD40-207ENST00000620709 KRTAP19-5Q3LI72 72 aa5.85□□□□□ -1.47
CD40-207ENST00000620709 MT1GP13640 62 aa5.78□□□□□ -1.48
CD40-207ENST00000620709 KRTAP15-1Q3LI76 137 aa5.74□□□□□ -1.49
CD40-207ENST00000620709 LCE1DQ5T752 114 aa5.69□□□□□ -1.5
CD40-207ENST00000620709 MT1MQ8N339 61 aa5.69□□□□□ -1.5
CD40-207ENST00000620709 MT1LQ93083 61 aa5.67□□□□□ -1.5
CD40-207ENST00000620709 MT4P47944 62 aa5.66□□□□□ -1.5
CD40-207ENST00000620709 LCE4AQ5TA78 99 aa5.63□□□□□ -1.51
CD40-207ENST00000620709 HMCN1Q96RW7 5635 aa5.63□□□□□ -1.51
CD40-207ENST00000620709 KRTAP4-3Q9BYR4 195 aa5.61□□□□□ -1.51
CD40-207ENST00000620709 KRTAP19-4Q3LI73 84 aa5.54□□□□□ -1.52
CD40-207ENST00000620709 AHNAK2Q8IVF2 5795 aa5.49□□□□□ -1.53
CD40-207ENST00000620709 LCE3CQ5T5A8 94 aa5.47□□□□□ -1.53
CD40-207ENST00000620709 KRTAP5-4Q6L8H1 288 aa5.45□□□□□ -1.54
CD40-207ENST00000620709 KRTAP4-7Q9BYR0 210 aa5.44□□□□□ -1.54
CD40-207ENST00000620709 KRTAP4-6Q9BYQ5 205 aa5.43□□□□□ -1.54
CD40-207ENST00000620709 SPRR5A0A1B0GTR4 108 aa5.42□□□□□ -1.54
CD40-207ENST00000620709 KRTAP5-10Q6L8G5 202 aa5.31□□□□□ -1.56
CD40-207ENST00000620709 LUZP6Q538Z0 58 aa5.25□□□□□ -1.57
CD40-207ENST00000620709 KRTAP20-2Q3LI61 65 aa5.2□□□□□ -1.58
CD40-207ENST00000620709 KRTAP5-5Q701N2 237 aaPredicted RBP5.18□□□□□ -1.58
CD40-207ENST00000620709 KRTAP5-3Q6L8H2 238 aa5.18□□□□□ -1.58
CD40-207ENST00000620709 LOC100996750A0A140TA64 210 aa5.17□□□□□ -1.58
CD40-207ENST00000620709 KRTAP12-4P60329 112 aa5.15□□□□□ -1.58
CD40-207ENST00000620709 KRTAP9-6A8MVA2 160 aa5.14□□□□□ -1.59
CD40-207ENST00000620709 KRTAP5-7Q6L8G8 165 aa5.12□□□□□ -1.59
CD40-207ENST00000620709 SYNE1Q8NF91 8797 aaKnown RBP5.05□□□□□ -1.6
CD40-207ENST00000620709 NDUFAF8A1L188 74 aa5.04□□□□□ -1.6
CD40-207ENST00000620709 KRTAP6-1Q3LI64 71 aa4.82□□□□□ -1.64
CD40-207ENST00000620709 MT1AP04731 61 aa4.82□□□□□ -1.64
CD40-207ENST00000620709 KRTAP4-11Q9BYQ6 195 aa4.77□□□□□ -1.65
CD40-207ENST00000620709 KRTAP5-2Q701N4 177 aa4.75□□□□□ -1.65
CD40-207ENST00000620709 KRTAP9-4Q9BYQ2 154 aa4.68□□□□□ -1.66
CD40-207ENST00000620709 KRTAP6-2Q3LI66 62 aa4.65□□□□□ -1.67
CD40-207ENST00000620709 KRTAP5-8O75690 187 aa4.61□□□□□ -1.67
CD40-207ENST00000620709 OBSCNQ5VST9 7968 aa4.57□□□□□ -1.68
CD40-207ENST00000620709 AHNAKQ09666 5890 aaKnown RBP4.54□□□□□ -1.68
CD40-207ENST00000620709 MUC5BQ9HC84 5762 aaPredicted RBP4.51□□□□□ -1.69
CD40-207ENST00000620709 MUC5ACP98088 5654 aa4.5□□□□□ -1.69
CD40-207ENST00000620709 A0A0A0MQY5 61 aa4.45□□□□□ -1.7
CD40-207ENST00000620709 KRTAP9-9Q9BYP9 154 aa4.44□□□□□ -1.7
CD40-207ENST00000620709 MT3P25713 68 aa4.42□□□□□ -1.7
CD40-207ENST00000620709 KRTAP5-1Q6L8H4 278 aa4.3□□□□□ -1.72
CD40-207ENST00000620709 H3BS24 57 aa4.29□□□□□ -1.72
CD40-207ENST00000620709 INE1O15225 51 aa4.18□□□□□ -1.74
CD40-207ENST00000620709 LCE3DQ9BYE3 92 aa4.11□□□□□ -1.75
CD40-207ENST00000620709 LCE1EQ5T753 118 aa4.05□□□□□ -1.76
CD40-207ENST00000620709 LCE3EQ5T5B0 92 aa3.99□□□□□ -1.77
CD40-207ENST00000620709 LCE1BQ5T7P3 118 aa3.94□□□□□ -1.78
CD40-207ENST00000620709 KRTAP4-2Q9BYR5 136 aa3.85□□□□□ -1.79
CD40-207ENST00000620709 LCE1CQ5T751 118 aa3.77□□□□□ -1.81
CD40-207ENST00000620709 KRTAP4-12Q9BQ66 201 aa3.64□□□□□ -1.83
CD40-207ENST00000620709 PRM1P04553 51 aa3.44□□□□□ -1.86
CD40-207ENST00000620709 KRTAP5-11Q6L8G4 156 aa3.42□□□□□ -1.86
CD40-207ENST00000620709 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.39□□□□□ -1.87
CD40-207ENST00000620709 LCE1FQ5T754 118 aa3.35□□□□□ -1.87
CD40-207ENST00000620709 PHGR1C9JFL3 82 aa3.15□□□□□ -1.9
CD40-207ENST00000620709 KRTAP21-2Q3LI59 83 aa3.14□□□□□ -1.91
CD40-207ENST00000620709 KRTAP4-4Q9BYR3 166 aa2.99□□□□□ -1.93
CD40-207ENST00000620709 MUC19Q7Z5P9 8384 aa2.82□□□□□ -1.96
CD40-207ENST00000620709 KRTAP21-1Q3LI58 79 aa2.37□□□□□ -2.03
CD40-207ENST00000620709 MUC16Q8WXI7 14507 aa1.97□□□□□ -2.09
Retrieved 77 of 20,778 RNA–protein pairs in 34.2 ms