RNA–Protein interactions for RNA: ENST00000620675.4

NEK3-210, Transcript of NIMA related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene NEK3, Length 2,072 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-210ENST00000620675 TNP1P09430 55 aa5.19□□□□□ -1.58
NEK3-210ENST00000620675 NEBP20929 6669 aa5.16□□□□□ -1.58
NEK3-210ENST00000620675 LCE3AQ5TA76 89 aa5.14□□□□□ -1.59
NEK3-210ENST00000620675 KRTAP19-7Q3SYF9 63 aa5.13□□□□□ -1.59
NEK3-210ENST00000620675 KRTAP19-5Q3LI72 72 aa5.09□□□□□ -1.59
NEK3-210ENST00000620675 KTN1-AS1Q86SY8 53 aa5.09□□□□□ -1.59
NEK3-210ENST00000620675 SPRR2EP22531 72 aa5.06□□□□□ -1.6
NEK3-210ENST00000620675 SPRR2BP35325 72 aa5.06□□□□□ -1.6
NEK3-210ENST00000620675 SPRR2AP35326 72 aa5.06□□□□□ -1.6
NEK3-210ENST00000620675 LCE1AQ5T7P2 110 aa5.06□□□□□ -1.6
NEK3-210ENST00000620675 KRTAP25-1Q3LHN0 102 aa5.06□□□□□ -1.6
NEK3-210ENST00000620675 MT1EP04732 61 aa5.04□□□□□ -1.6
NEK3-210ENST00000620675 ROMO1P60602 79 aa5.03□□□□□ -1.6
NEK3-210ENST00000620675 LCE5AQ5TCM9 118 aa5□□□□□ -1.61
NEK3-210ENST00000620675 LCE4AQ5TA78 99 aa4.99□□□□□ -1.61
NEK3-210ENST00000620675 KRTAP23-1A1A580 65 aa4.94□□□□□ -1.62
NEK3-210ENST00000620675 A0A0A0MQY5 61 aa4.92□□□□□ -1.62
NEK3-210ENST00000620675 KRTAP12-3P60328 96 aa4.91□□□□□ -1.62
NEK3-210ENST00000620675 KRTAP19-3Q7Z4W3 81 aa4.9□□□□□ -1.62
NEK3-210ENST00000620675 MT1LQ93083 61 aa4.88□□□□□ -1.63
NEK3-210ENST00000620675 SPRR2DP22532 72 aa4.87□□□□□ -1.63
NEK3-210ENST00000620675 DSTQ03001 7570 aaKnown RBP4.81□□□□□ -1.64
NEK3-210ENST00000620675 KRTAP20-1Q3LI63 56 aa4.8□□□□□ -1.64
NEK3-210ENST00000620675 MT1GP13640 62 aa4.79□□□□□ -1.64
NEK3-210ENST00000620675 MT1MQ8N339 61 aa4.77□□□□□ -1.65
NEK3-210ENST00000620675 KRTAP2-3P0C7H8 128 aa4.76□□□□□ -1.65
NEK3-210ENST00000620675 KRTAP2-4Q9BYR9 128 aa4.76□□□□□ -1.65
NEK3-210ENST00000620675 PP632Q6XCG6 107 aa4.74□□□□□ -1.65
NEK3-210ENST00000620675 KRTAP4-3Q9BYR4 195 aa4.74□□□□□ -1.65
NEK3-210ENST00000620675 PRAC1Q96KF2 57 aa4.74□□□□□ -1.65
NEK3-210ENST00000620675 KRTAP15-1Q3LI76 137 aa4.69□□□□□ -1.66
NEK3-210ENST00000620675 KRTAP2-2Q9BYT5 123 aa4.63□□□□□ -1.67
NEK3-210ENST00000620675 KRTAP2-1Q9BYU5 128 aa4.63□□□□□ -1.67
NEK3-210ENST00000620675 LCE3CQ5T5A8 94 aa4.56□□□□□ -1.68
NEK3-210ENST00000620675 KRTAP19-4Q3LI73 84 aa4.49□□□□□ -1.69
NEK3-210ENST00000620675 KRTAP9-6A8MVA2 160 aa4.39□□□□□ -1.71
NEK3-210ENST00000620675 KRTAP5-5Q701N2 237 aaPredicted RBP4.35□□□□□ -1.71
NEK3-210ENST00000620675 KRTAP5-4Q6L8H1 288 aa4.33□□□□□ -1.72
NEK3-210ENST00000620675 MT4P47944 62 aa4.28□□□□□ -1.72
NEK3-210ENST00000620675 HMCN1Q96RW7 5635 aa4.27□□□□□ -1.73
NEK3-210ENST00000620675 SYNE1Q8NF91 8797 aaKnown RBP4.21□□□□□ -1.74
NEK3-210ENST00000620675 KRTAP6-1Q3LI64 71 aa4.15□□□□□ -1.75
NEK3-210ENST00000620675 MT1AP04731 61 aa4.12□□□□□ -1.75
NEK3-210ENST00000620675 SPRR5A0A1B0GTR4 108 aa4.12□□□□□ -1.75
NEK3-210ENST00000620675 KRTAP5-6Q6L8G9 129 aaPredicted RBP4.1□□□□□ -1.75
NEK3-210ENST00000620675 NDUFAF8A1L188 74 aa4.09□□□□□ -1.76
NEK3-210ENST00000620675 KRTAP12-4P60329 112 aa4.07□□□□□ -1.76
NEK3-210ENST00000620675 KRTAP20-2Q3LI61 65 aa4.07□□□□□ -1.76
NEK3-210ENST00000620675 AHNAK2Q8IVF2 5795 aa3.98□□□□□ -1.77
NEK3-210ENST00000620675 GPR98Q8WXG9 6306 aa3.9□□□□□ -1.79
NEK3-210ENST00000620675 KRTAP6-2Q3LI66 62 aa3.88□□□□□ -1.79
NEK3-210ENST00000620675 KRTAP5-2Q701N4 177 aa3.85□□□□□ -1.79
NEK3-210ENST00000620675 LUZP6Q538Z0 58 aa3.8□□□□□ -1.8
NEK3-210ENST00000620675 KRTAP5-10Q6L8G5 202 aa3.78□□□□□ -1.8
NEK3-210ENST00000620675 OBSCNQ5VST9 7968 aa3.73□□□□□ -1.81
NEK3-210ENST00000620675 MT3P25713 68 aa3.73□□□□□ -1.81
NEK3-210ENST00000620675 KRTAP5-11Q6L8G4 156 aa3.69□□□□□ -1.82
NEK3-210ENST00000620675 KRTAP5-7Q6L8G8 165 aa3.54□□□□□ -1.84
NEK3-210ENST00000620675 KRTAP5-8O75690 187 aa3.51□□□□□ -1.85
NEK3-210ENST00000620675 KRTAP5-1Q6L8H4 278 aa3.47□□□□□ -1.85
NEK3-210ENST00000620675 KRTAP4-4Q9BYR3 166 aa3.4□□□□□ -1.87
NEK3-210ENST00000620675 MUC5ACP98088 5654 aa3.39□□□□□ -1.87
NEK3-210ENST00000620675 INE1O15225 51 aa3.37□□□□□ -1.87
NEK3-210ENST00000620675 LCE3DQ9BYE3 92 aa3.34□□□□□ -1.87
NEK3-210ENST00000620675 LCE1EQ5T753 118 aa3.32□□□□□ -1.88
NEK3-210ENST00000620675 MUC5BQ9HC84 5762 aaPredicted RBP3.24□□□□□ -1.89
NEK3-210ENST00000620675 LCE3EQ5T5B0 92 aa3.2□□□□□ -1.9
NEK3-210ENST00000620675 LCE1BQ5T7P3 118 aa3.18□□□□□ -1.9
NEK3-210ENST00000620675 LCE1FQ5T754 118 aa3.16□□□□□ -1.9
NEK3-210ENST00000620675 AHNAKQ09666 5890 aaKnown RBP3.13□□□□□ -1.91
NEK3-210ENST00000620675 LCE1CQ5T751 118 aa3.1□□□□□ -1.91
NEK3-210ENST00000620675 KRTAP21-2Q3LI59 83 aa2.72□□□□□ -1.97
NEK3-210ENST00000620675 PRM1P04553 51 aa2.64□□□□□ -1.99
NEK3-210ENST00000620675 PHGR1C9JFL3 82 aa2.41□□□□□ -2.02
NEK3-210ENST00000620675 MUC19Q7Z5P9 8384 aa2.28□□□□□ -2.04
NEK3-210ENST00000620675 KRTAP21-1Q3LI58 79 aa1.59□□□□□ -2.15
NEK3-210ENST00000620675 MUC16Q8WXI7 14507 aa1.53□□□□□ -2.16
Retrieved 77 of 20,778 RNA–protein pairs in 10.5 ms