RNA–Protein interactions for RNA: ENST00000620242.1

SRSF3-206, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 2

Gene SRSF3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-206ENST00000620242 KRTAP4-6Q9BYQ5 205 aa4.81□□□□□ -1.64
SRSF3-206ENST00000620242 KRTAP19-7Q3SYF9 63 aa4.8□□□□□ -1.64
SRSF3-206ENST00000620242 MT1EP04732 61 aa4.78□□□□□ -1.64
SRSF3-206ENST00000620242 SPRR2DP22532 72 aa4.78□□□□□ -1.64
SRSF3-206ENST00000620242 LCE3AQ5TA76 89 aa4.78□□□□□ -1.64
SRSF3-206ENST00000620242 KRTAP2-2Q9BYT5 123 aa4.77□□□□□ -1.65
SRSF3-206ENST00000620242 KRTAP2-1Q9BYU5 128 aa4.77□□□□□ -1.65
SRSF3-206ENST00000620242 KRTAP19-5Q3LI72 72 aa4.76□□□□□ -1.65
SRSF3-206ENST00000620242 KRTAP19-3Q7Z4W3 81 aa4.73□□□□□ -1.65
SRSF3-206ENST00000620242 ROMO1P60602 79 aa4.71□□□□□ -1.66
SRSF3-206ENST00000620242 PP632Q6XCG6 107 aa4.71□□□□□ -1.66
SRSF3-206ENST00000620242 MT1GP13640 62 aa4.69□□□□□ -1.66
SRSF3-206ENST00000620242 LCE5AQ5TCM9 118 aa4.69□□□□□ -1.66
SRSF3-206ENST00000620242 KRTAP4-12Q9BQ66 201 aa4.68□□□□□ -1.66
SRSF3-206ENST00000620242 KRTAP15-1Q3LI76 137 aa4.67□□□□□ -1.66
SRSF3-206ENST00000620242 KRTAP12-3P60328 96 aa4.66□□□□□ -1.66
SRSF3-206ENST00000620242 LCE4AQ5TA78 99 aa4.64□□□□□ -1.67
SRSF3-206ENST00000620242 LCE3BQ5TA77 95 aa4.63□□□□□ -1.67
SRSF3-206ENST00000620242 MT1LQ93083 61 aa4.61□□□□□ -1.67
SRSF3-206ENST00000620242 GPR98Q8WXG9 6306 aa4.59□□□□□ -1.67
SRSF3-206ENST00000620242 BRK1Q8WUW1 75 aa4.58□□□□□ -1.68
SRSF3-206ENST00000620242 KRTAP9-4Q9BYQ2 154 aa4.54□□□□□ -1.68
SRSF3-206ENST00000620242 MT1MQ8N339 61 aa4.53□□□□□ -1.68
SRSF3-206ENST00000620242 KRTAP9-9Q9BYP9 154 aa4.48□□□□□ -1.69
SRSF3-206ENST00000620242 DSTQ03001 7570 aaKnown RBP4.43□□□□□ -1.7
SRSF3-206ENST00000620242 PMAIP1Q13794 54 aa4.35□□□□□ -1.71
SRSF3-206ENST00000620242 KRTAP4-9Q9BYQ8 210 aa4.34□□□□□ -1.71
SRSF3-206ENST00000620242 LCE3CQ5T5A8 94 aa4.31□□□□□ -1.72
SRSF3-206ENST00000620242 KRTAP4-3Q9BYR4 195 aa4.31□□□□□ -1.72
SRSF3-206ENST00000620242 KRTAP4-7Q9BYR0 210 aa4.29□□□□□ -1.72
SRSF3-206ENST00000620242 PRAC1Q96KF2 57 aa4.28□□□□□ -1.72
SRSF3-206ENST00000620242 PRO0628Q9UI54 55 aa4.25□□□□□ -1.73
SRSF3-206ENST00000620242 LCE1DQ5T752 114 aa4.19□□□□□ -1.74
SRSF3-206ENST00000620242 KRTAP5-4Q6L8H1 288 aa4.19□□□□□ -1.74
SRSF3-206ENST00000620242 HMCN1Q96RW7 5635 aa4.17□□□□□ -1.74
SRSF3-206ENST00000620242 KRTAP5-5Q701N2 237 aaPredicted RBP4.12□□□□□ -1.75
SRSF3-206ENST00000620242 MT4P47944 62 aa4.11□□□□□ -1.75
SRSF3-206ENST00000620242 AHNAK2Q8IVF2 5795 aa4.1□□□□□ -1.75
SRSF3-206ENST00000620242 KRTAP12-4P60329 112 aa4.07□□□□□ -1.76
SRSF3-206ENST00000620242 KRTAP5-10Q6L8G5 202 aa4.03□□□□□ -1.76
SRSF3-206ENST00000620242 SPRR5A0A1B0GTR4 108 aa4.02□□□□□ -1.77
SRSF3-206ENST00000620242 KTN1-AS1Q86SY8 53 aa4□□□□□ -1.77
SRSF3-206ENST00000620242 MT1AP04731 61 aa3.96□□□□□ -1.78
SRSF3-206ENST00000620242 NDUFAF8A1L188 74 aa3.94□□□□□ -1.78
SRSF3-206ENST00000620242 KRTAP4-11Q9BYQ6 195 aa3.94□□□□□ -1.78
SRSF3-206ENST00000620242 KRTAP9-6A8MVA2 160 aa3.93□□□□□ -1.78
SRSF3-206ENST00000620242 KRTAP20-2Q3LI61 65 aa3.93□□□□□ -1.78
SRSF3-206ENST00000620242 KRTAP5-7Q6L8G8 165 aa3.91□□□□□ -1.78
SRSF3-206ENST00000620242 KRTAP5-3Q6L8H2 238 aa3.87□□□□□ -1.79
SRSF3-206ENST00000620242 SYNE1Q8NF91 8797 aaKnown RBP3.85□□□□□ -1.79
SRSF3-206ENST00000620242 KRTAP6-1Q3LI64 71 aa3.85□□□□□ -1.79
SRSF3-206ENST00000620242 KRTAP4-2Q9BYR5 136 aa3.77□□□□□ -1.81
SRSF3-206ENST00000620242 MT3P25713 68 aa3.75□□□□□ -1.81
SRSF3-206ENST00000620242 KRTAP5-2Q701N4 177 aa3.71□□□□□ -1.82
SRSF3-206ENST00000620242 KRTAP6-2Q3LI66 62 aa3.65□□□□□ -1.83
SRSF3-206ENST00000620242 LUZP6Q538Z0 58 aa3.56□□□□□ -1.84
SRSF3-206ENST00000620242 AHNAKQ09666 5890 aaKnown RBP3.51□□□□□ -1.85
SRSF3-206ENST00000620242 MUC5ACP98088 5654 aa3.47□□□□□ -1.85
SRSF3-206ENST00000620242 MUC5BQ9HC84 5762 aaPredicted RBP3.44□□□□□ -1.86
SRSF3-206ENST00000620242 LCE1FQ5T754 118 aa3.41□□□□□ -1.86
SRSF3-206ENST00000620242 KRTAP5-8O75690 187 aa3.39□□□□□ -1.87
SRSF3-206ENST00000620242 OBSCNQ5VST9 7968 aa3.32□□□□□ -1.88
SRSF3-206ENST00000620242 LCE1EQ5T753 118 aa3.31□□□□□ -1.88
SRSF3-206ENST00000620242 KRTAP5-1Q6L8H4 278 aa3.26□□□□□ -1.89
SRSF3-206ENST00000620242 LCE3DQ9BYE3 92 aa3.19□□□□□ -1.9
SRSF3-206ENST00000620242 LCE1CQ5T751 118 aa3.05□□□□□ -1.92
SRSF3-206ENST00000620242 LCE1BQ5T7P3 118 aa3.05□□□□□ -1.92
SRSF3-206ENST00000620242 LCE3EQ5T5B0 92 aa3.04□□□□□ -1.92
SRSF3-206ENST00000620242 KRTAP5-6Q6L8G9 129 aaPredicted RBP2.8□□□□□ -1.96
SRSF3-206ENST00000620242 KRTAP5-11Q6L8G4 156 aa2.74□□□□□ -1.97
SRSF3-206ENST00000620242 INE1O15225 51 aa2.54□□□□□ -2
SRSF3-206ENST00000620242 KRTAP21-2Q3LI59 83 aa2.53□□□□□ -2
SRSF3-206ENST00000620242 PHGR1C9JFL3 82 aa2.37□□□□□ -2.03
SRSF3-206ENST00000620242 PRM1P04553 51 aa2.37□□□□□ -2.03
SRSF3-206ENST00000620242 KRTAP4-4Q9BYR3 166 aa2.23□□□□□ -2.05
SRSF3-206ENST00000620242 MUC19Q7Z5P9 8384 aa2.04□□□□□ -2.08
SRSF3-206ENST00000620242 KRTAP21-1Q3LI58 79 aa1.8□□□□□ -2.12
SRSF3-206ENST00000620242 MUC16Q8WXI7 14507 aa1.51□□□□□ -2.17
Retrieved 78 of 20,778 RNA–protein pairs in 6.6 ms