RNA–Protein interactions for RNA: ENST00000620103.4

MUC1-228, Transcript of mucin 1, cell surface associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene MUC1, Length 1,811 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC1-228ENST00000620103 KRTAP23-1A1A580 65 aa6.2□□□□□ -1.42
MUC1-228ENST00000620103 SPRR5A0A1B0GTR4 108 aa6.18□□□□□ -1.42
MUC1-228ENST00000620103 KRTAP4-8A0A0G2JLE6 195 aa6.18□□□□□ -1.42
MUC1-228ENST00000620103 KRTAP4-8Q9BYQ9 185 aa6.18□□□□□ -1.42
MUC1-228ENST00000620103 KRTAP10-7P60409 375 aaPredicted RBP6.12□□□□□ -1.43
MUC1-228ENST00000620103 KRTAP10-12P60413 245 aa6.11□□□□□ -1.43
MUC1-228ENST00000620103 CAMK2N1Q7Z7J9 78 aa6.11□□□□□ -1.43
MUC1-228ENST00000620103 KRTAP2-2Q9BYT5 123 aa6.09□□□□□ -1.44
MUC1-228ENST00000620103 KRTAP2-1Q9BYU5 128 aa6.09□□□□□ -1.44
MUC1-228ENST00000620103 SPRR2DP22532 72 aa6.06□□□□□ -1.44
MUC1-228ENST00000620103 TNP1P09430 55 aa6.02□□□□□ -1.45
MUC1-228ENST00000620103 LCE3BQ5TA77 95 aa5.91□□□□□ -1.46
MUC1-228ENST00000620103 INE1O15225 51 aa5.82□□□□□ -1.48
MUC1-228ENST00000620103 KRTAP19-7Q3SYF9 63 aa5.76□□□□□ -1.49
MUC1-228ENST00000620103 LCE5AQ5TCM9 118 aa5.73□□□□□ -1.49
MUC1-228ENST00000620103 MT1EP04732 61 aa5.71□□□□□ -1.5
MUC1-228ENST00000620103 KRTAP19-3Q7Z4W3 81 aa5.69□□□□□ -1.5
MUC1-228ENST00000620103 DSTQ03001 7570 aaKnown RBP5.67□□□□□ -1.5
MUC1-228ENST00000620103 LCE3AQ5TA76 89 aa5.58□□□□□ -1.52
MUC1-228ENST00000620103 GPR98Q8WXG9 6306 aa5.56□□□□□ -1.52
MUC1-228ENST00000620103 KRTAP19-5Q3LI72 72 aa5.55□□□□□ -1.52
MUC1-228ENST00000620103 MT1GP13640 62 aa5.53□□□□□ -1.52
MUC1-228ENST00000620103 KRTAP4-9Q9BYQ8 210 aa5.52□□□□□ -1.53
MUC1-228ENST00000620103 MT1MQ8N339 61 aa5.44□□□□□ -1.54
MUC1-228ENST00000620103 MT1LQ93083 61 aa5.44□□□□□ -1.54
MUC1-228ENST00000620103 LCE1DQ5T752 114 aa5.41□□□□□ -1.54
MUC1-228ENST00000620103 LCE4AQ5TA78 99 aa5.38□□□□□ -1.55
MUC1-228ENST00000620103 HMCN1Q96RW7 5635 aa5.37□□□□□ -1.55
MUC1-228ENST00000620103 LOC100996750A0A140TA64 210 aa5.34□□□□□ -1.55
MUC1-228ENST00000620103 KRTAP4-6Q9BYQ5 205 aa5.34□□□□□ -1.55
MUC1-228ENST00000620103 KRTAP12-3P60328 96 aa5.32□□□□□ -1.56
MUC1-228ENST00000620103 KRTAP4-3Q9BYR4 195 aa5.3□□□□□ -1.56
MUC1-228ENST00000620103 MT4P47944 62 aa5.3□□□□□ -1.56
MUC1-228ENST00000620103 KRTAP5-4Q6L8H1 288 aa5.29□□□□□ -1.56
MUC1-228ENST00000620103 AHNAK2Q8IVF2 5795 aa5.22□□□□□ -1.57
MUC1-228ENST00000620103 KRTAP4-7Q9BYR0 210 aa5.15□□□□□ -1.59
MUC1-228ENST00000620103 KRTAP5-10Q6L8G5 202 aa5.11□□□□□ -1.59
MUC1-228ENST00000620103 LCE3CQ5T5A8 94 aa5.06□□□□□ -1.6
MUC1-228ENST00000620103 KRTAP5-5Q701N2 237 aaPredicted RBP5.03□□□□□ -1.6
MUC1-228ENST00000620103 KRTAP20-2Q3LI61 65 aa4.97□□□□□ -1.61
MUC1-228ENST00000620103 KRTAP5-3Q6L8H2 238 aa4.95□□□□□ -1.62
MUC1-228ENST00000620103 KRTAP5-7Q6L8G8 165 aa4.93□□□□□ -1.62
MUC1-228ENST00000620103 KRTAP19-4Q3LI73 84 aa4.91□□□□□ -1.62
MUC1-228ENST00000620103 KRTAP12-4P60329 112 aa4.88□□□□□ -1.63
MUC1-228ENST00000620103 KRTAP9-6A8MVA2 160 aa4.84□□□□□ -1.63
MUC1-228ENST00000620103 SYNE1Q8NF91 8797 aaKnown RBP4.83□□□□□ -1.64
MUC1-228ENST00000620103 KRTAP4-12Q9BQ66 201 aa4.78□□□□□ -1.64
MUC1-228ENST00000620103 MT1AP04731 61 aa4.62□□□□□ -1.67
MUC1-228ENST00000620103 KRTAP9-9Q9BYP9 154 aa4.62□□□□□ -1.67
MUC1-228ENST00000620103 KRTAP9-4Q9BYQ2 154 aa4.62□□□□□ -1.67
MUC1-228ENST00000620103 KRTAP5-2Q701N4 177 aa4.61□□□□□ -1.67
MUC1-228ENST00000620103 KRTAP6-1Q3LI64 71 aa4.6□□□□□ -1.67
MUC1-228ENST00000620103 KRTAP4-11Q9BYQ6 195 aa4.57□□□□□ -1.68
MUC1-228ENST00000620103 KRTAP5-8O75690 187 aa4.43□□□□□ -1.7
MUC1-228ENST00000620103 KRTAP6-2Q3LI66 62 aa4.41□□□□□ -1.7
MUC1-228ENST00000620103 AHNAKQ09666 5890 aaKnown RBP4.35□□□□□ -1.71
MUC1-228ENST00000620103 OBSCNQ5VST9 7968 aa4.33□□□□□ -1.72
MUC1-228ENST00000620103 MUC5BQ9HC84 5762 aaPredicted RBP4.33□□□□□ -1.72
MUC1-228ENST00000620103 MUC5ACP98088 5654 aa4.33□□□□□ -1.72
MUC1-228ENST00000620103 MT3P25713 68 aa4.23□□□□□ -1.73
MUC1-228ENST00000620103 KRTAP4-2Q9BYR5 136 aa4.17□□□□□ -1.74
MUC1-228ENST00000620103 KRTAP5-1Q6L8H4 278 aa4.16□□□□□ -1.74
MUC1-228ENST00000620103 LCE3EQ5T5B0 92 aa3.96□□□□□ -1.78
MUC1-228ENST00000620103 LCE3DQ9BYE3 92 aa3.95□□□□□ -1.78
MUC1-228ENST00000620103 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
MUC1-228ENST00000620103 PRM1P04553 51 aa3.92□□□□□ -1.78
MUC1-228ENST00000620103 LCE1BQ5T7P3 118 aa3.66□□□□□ -1.82
MUC1-228ENST00000620103 LCE1CQ5T751 118 aa3.65□□□□□ -1.82
MUC1-228ENST00000620103 KRTAP5-11Q6L8G4 156 aa3.33□□□□□ -1.88
MUC1-228ENST00000620103 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.33□□□□□ -1.88
MUC1-228ENST00000620103 LCE1FQ5T754 118 aa3.3□□□□□ -1.88
MUC1-228ENST00000620103 KRTAP21-2Q3LI59 83 aa3.05□□□□□ -1.92
MUC1-228ENST00000620103 PHGR1C9JFL3 82 aa2.95□□□□□ -1.94
MUC1-228ENST00000620103 KRTAP4-4Q9BYR3 166 aa2.77□□□□□ -1.97
MUC1-228ENST00000620103 MUC19Q7Z5P9 8384 aa2.69□□□□□ -1.98
MUC1-228ENST00000620103 KRTAP21-1Q3LI58 79 aa2.61□□□□□ -1.99
MUC1-228ENST00000620103 MUC16Q8WXI7 14507 aa1.89□□□□□ -2.11
Retrieved 77 of 20,778 RNA–protein pairs in 12.5 ms