RNA–Protein interactions for RNA: ENST00000617564.1

COL4A2-210, Transcript of collagen type IV alpha 2 chain, humanhuman

Gene COL4A2, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A2-210ENST00000617564 PRR15LQ9BU68 103 aa4.79□□□□□ -1.64
COL4A2-210ENST00000617564 PCP4P48539 62 aa4.77□□□□□ -1.65
COL4A2-210ENST00000617564 SVIPQ8NHG7 77 aa4.77□□□□□ -1.65
COL4A2-210ENST00000617564 LINC01558Q9Y6Z2 57 aa4.77□□□□□ -1.65
COL4A2-210ENST00000617564 SPRR5A0A1B0GTR4 108 aa4.75□□□□□ -1.65
COL4A2-210ENST00000617564 SPATA8Q6RVD6 105 aa4.74□□□□□ -1.65
COL4A2-210ENST00000617564 A0A0D9SG42 100 aa4.72□□□□□ -1.65
COL4A2-210ENST00000617564 SMIM26A0A096LP01 95 aa4.7□□□□□ -1.66
COL4A2-210ENST00000617564 MT4P47944 62 aa4.67□□□□□ -1.66
COL4A2-210ENST00000617564 CAMK2N1Q7Z7J9 78 aa4.67□□□□□ -1.66
COL4A2-210ENST00000617564 V9GYY9 64 aa4.67□□□□□ -1.66
COL4A2-210ENST00000617564 SPINT4Q6UDR6 99 aa4.64□□□□□ -1.67
COL4A2-210ENST00000617564 Q1T7F1 81 aa4.62□□□□□ -1.67
COL4A2-210ENST00000617564 KRTAP5-11Q6L8G4 156 aa4.62□□□□□ -1.67
COL4A2-210ENST00000617564 A8MU10 97 aa4.61□□□□□ -1.67
COL4A2-210ENST00000617564 UQCR11O14957 56 aa4.61□□□□□ -1.67
COL4A2-210ENST00000617564 KRTAP12-1P59990 96 aa4.61□□□□□ -1.67
COL4A2-210ENST00000617564 RPS28P62857 69 aaKnown RBP4.6□□□□□ -1.67
COL4A2-210ENST00000617564 PSPHP1O15172 72 aa4.57□□□□□ -1.68
COL4A2-210ENST00000617564 MIR22HGQ0VDD5 57 aa4.53□□□□□ -1.68
COL4A2-210ENST00000617564 KRTAP19-3Q7Z4W3 81 aa4.53□□□□□ -1.68
COL4A2-210ENST00000617564 KRTAP19-7Q3SYF9 63 aa4.51□□□□□ -1.69
COL4A2-210ENST00000617564 MT1EP04732 61 aa4.5□□□□□ -1.69
COL4A2-210ENST00000617564 A6NED7 52 aa4.45□□□□□ -1.7
COL4A2-210ENST00000617564 K7ERS5 55 aa4.44□□□□□ -1.7
COL4A2-210ENST00000617564 C10orf95Q9H7T3 257 aa4.39□□□□□ -1.71
COL4A2-210ENST00000617564 MT1GP13640 62 aa4.38□□□□□ -1.71
COL4A2-210ENST00000617564 TNP1P09430 55 aa4.37□□□□□ -1.71
COL4A2-210ENST00000617564 PP632Q6XCG6 107 aa4.37□□□□□ -1.71
COL4A2-210ENST00000617564 KRTAP5-4Q6L8H1 288 aa4.33□□□□□ -1.72
COL4A2-210ENST00000617564 KRTAP19-5Q3LI72 72 aa4.31□□□□□ -1.72
COL4A2-210ENST00000617564 MT1MQ8N339 61 aa4.3□□□□□ -1.72
COL4A2-210ENST00000617564 CDC42SE1Q9NRR8 79 aa4.29□□□□□ -1.72
COL4A2-210ENST00000617564 AHNAKQ09666 5890 aaKnown RBP4.28□□□□□ -1.72
COL4A2-210ENST00000617564 KRTAP5-1Q6L8H4 278 aa4.25□□□□□ -1.73
COL4A2-210ENST00000617564 KRTAP25-1Q3LHN0 102 aa4.24□□□□□ -1.73
COL4A2-210ENST00000617564 MT1LQ93083 61 aa4.24□□□□□ -1.73
COL4A2-210ENST00000617564 LCE3AQ5TA76 89 aa4.22□□□□□ -1.73
COL4A2-210ENST00000617564 LCE1EQ5T753 118 aa4.19□□□□□ -1.74
COL4A2-210ENST00000617564 MUC5ACP98088 5654 aa4.17□□□□□ -1.74
COL4A2-210ENST00000617564 KRTAP20-2Q3LI61 65 aa4.16□□□□□ -1.74
COL4A2-210ENST00000617564 KRTAP4-3Q9BYR4 195 aa4.16□□□□□ -1.74
COL4A2-210ENST00000617564 ROMO1P60602 79 aa4.15□□□□□ -1.75
COL4A2-210ENST00000617564 MUC5BQ9HC84 5762 aaPredicted RBP4.14□□□□□ -1.75
COL4A2-210ENST00000617564 KRTAP4-4Q9BYR3 166 aa4.12□□□□□ -1.75
COL4A2-210ENST00000617564 KRTAP12-3P60328 96 aa4.08□□□□□ -1.76
COL4A2-210ENST00000617564 BRK1Q8WUW1 75 aa4.08□□□□□ -1.76
COL4A2-210ENST00000617564 KRTAP5-5Q701N2 237 aaPredicted RBP3.98□□□□□ -1.77
COL4A2-210ENST00000617564 KRTAP12-4P60329 112 aa3.96□□□□□ -1.78
COL4A2-210ENST00000617564 KRTAP5-8O75690 187 aa3.95□□□□□ -1.78
COL4A2-210ENST00000617564 A0A0A0MQY5 61 aa3.92□□□□□ -1.78
COL4A2-210ENST00000617564 SYNE1Q8NF91 8797 aaKnown RBP3.89□□□□□ -1.79
COL4A2-210ENST00000617564 PMAIP1Q13794 54 aa3.86□□□□□ -1.79
COL4A2-210ENST00000617564 MT3P25713 68 aa3.81□□□□□ -1.8
COL4A2-210ENST00000617564 LCE3CQ5T5A8 94 aa3.78□□□□□ -1.8
COL4A2-210ENST00000617564 PRO0628Q9UI54 55 aa3.78□□□□□ -1.8
COL4A2-210ENST00000617564 KRTAP5-2Q701N4 177 aa3.72□□□□□ -1.81
COL4A2-210ENST00000617564 OBSCNQ5VST9 7968 aa3.71□□□□□ -1.82
COL4A2-210ENST00000617564 PRAC1Q96KF2 57 aa3.64□□□□□ -1.83
COL4A2-210ENST00000617564 MT1AP04731 61 aa3.62□□□□□ -1.83
COL4A2-210ENST00000617564 KRTAP6-1Q3LI64 71 aa3.59□□□□□ -1.83
COL4A2-210ENST00000617564 KTN1-AS1Q86SY8 53 aa3.56□□□□□ -1.84
COL4A2-210ENST00000617564 KRTAP9-6A8MVA2 160 aa3.52□□□□□ -1.85
COL4A2-210ENST00000617564 KRTAP6-2Q3LI66 62 aa3.48□□□□□ -1.85
COL4A2-210ENST00000617564 LCE1FQ5T754 118 aa3.28□□□□□ -1.88
COL4A2-210ENST00000617564 LUZP6Q538Z0 58 aa3.08□□□□□ -1.92
COL4A2-210ENST00000617564 NDUFAF8A1L188 74 aa3.06□□□□□ -1.92
COL4A2-210ENST00000617564 LCE1BQ5T7P3 118 aa2.94□□□□□ -1.94
COL4A2-210ENST00000617564 LCE1CQ5T751 118 aa2.91□□□□□ -1.94
COL4A2-210ENST00000617564 PHGR1C9JFL3 82 aa2.9□□□□□ -1.95
COL4A2-210ENST00000617564 LCE3EQ5T5B0 92 aa2.81□□□□□ -1.96
COL4A2-210ENST00000617564 LCE3DQ9BYE3 92 aa2.78□□□□□ -1.96
COL4A2-210ENST00000617564 KRTAP21-2Q3LI59 83 aa2.37□□□□□ -2.03
COL4A2-210ENST00000617564 MUC19Q7Z5P9 8384 aa2.33□□□□□ -2.04
COL4A2-210ENST00000617564 INE1O15225 51 aa2.22□□□□□ -2.05
COL4A2-210ENST00000617564 KRTAP21-1Q3LI58 79 aa2.2□□□□□ -2.06
COL4A2-210ENST00000617564 PRM1P04553 51 aa2.12□□□□□ -2.07
COL4A2-210ENST00000617564 MUC16Q8WXI7 14507 aa1.57□□□□□ -2.16
Retrieved 78 of 20,778 RNA–protein pairs in 60 ms