RNA–Protein interactions for RNA: ENST00000615520.1

LHX9-208, Transcript of LIM homeobox 9, humanhuman

Gene LHX9, Length 1,051 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX9-208ENST00000615520 KRTAP2-3P0C7H8 128 aa6.57□□□□□ -1.36
LHX9-208ENST00000615520 SPRR2DP22532 72 aa6.57□□□□□ -1.36
LHX9-208ENST00000615520 KRTAP2-4Q9BYR9 128 aa6.57□□□□□ -1.36
LHX9-208ENST00000615520 KRTAP19-3Q7Z4W3 81 aa6.56□□□□□ -1.36
LHX9-208ENST00000615520 PMAIP1Q13794 54 aa6.55□□□□□ -1.36
LHX9-208ENST00000615520 PP632Q6XCG6 107 aa6.53□□□□□ -1.36
LHX9-208ENST00000615520 MT1LQ93083 61 aa6.49□□□□□ -1.37
LHX9-208ENST00000615520 LCE5AQ5TCM9 118 aa6.47□□□□□ -1.37
LHX9-208ENST00000615520 PRO0628Q9UI54 55 aa6.46□□□□□ -1.38
LHX9-208ENST00000615520 MT1GP13640 62 aa6.44□□□□□ -1.38
LHX9-208ENST00000615520 MT1MQ8N339 61 aa6.36□□□□□ -1.39
LHX9-208ENST00000615520 KRTAP2-2Q9BYT5 123 aa6.36□□□□□ -1.39
LHX9-208ENST00000615520 KRTAP2-1Q9BYU5 128 aa6.36□□□□□ -1.39
LHX9-208ENST00000615520 KRTAP15-1Q3LI76 137 aa6.33□□□□□ -1.4
LHX9-208ENST00000615520 LCE3BQ5TA77 95 aa6.33□□□□□ -1.4
LHX9-208ENST00000615520 KRTAP4-7Q9BYR0 210 aa6.23□□□□□ -1.41
LHX9-208ENST00000615520 KRTAP4-3Q9BYR4 195 aa6.22□□□□□ -1.41
LHX9-208ENST00000615520 PRAC1Q96KF2 57 aa6.21□□□□□ -1.42
LHX9-208ENST00000615520 KRTAP19-4Q3LI73 84 aa6.16□□□□□ -1.42
LHX9-208ENST00000615520 DSTQ03001 7570 aaKnown RBP6.15□□□□□ -1.43
LHX9-208ENST00000615520 LCE3CQ5T5A8 94 aa6.12□□□□□ -1.43
LHX9-208ENST00000615520 KTN1-AS1Q86SY8 53 aa6.08□□□□□ -1.44
LHX9-208ENST00000615520 GPR98Q8WXG9 6306 aa5.98□□□□□ -1.45
LHX9-208ENST00000615520 LOC100996750A0A140TA64 210 aa5.88□□□□□ -1.47
LHX9-208ENST00000615520 SVIPQ8NHG7 77 aa5.88□□□□□ -1.47
LHX9-208ENST00000615520 LCE4AQ5TA78 99 aa5.78□□□□□ -1.48
LHX9-208ENST00000615520 KRTAP4-9Q9BYQ8 210 aa5.78□□□□□ -1.48
LHX9-208ENST00000615520 KRTAP9-6A8MVA2 160 aa5.73□□□□□ -1.49
LHX9-208ENST00000615520 MT4P47944 62 aa5.72□□□□□ -1.49
LHX9-208ENST00000615520 KRTAP5-5Q701N2 237 aaPredicted RBP5.72□□□□□ -1.49
LHX9-208ENST00000615520 KRTAP5-4Q6L8H1 288 aa5.71□□□□□ -1.5
LHX9-208ENST00000615520 LCE1DQ5T752 114 aa5.68□□□□□ -1.5
LHX9-208ENST00000615520 HMCN1Q96RW7 5635 aa5.6□□□□□ -1.51
LHX9-208ENST00000615520 KRTAP4-6Q9BYQ5 205 aa5.55□□□□□ -1.52
LHX9-208ENST00000615520 MT1AP04731 61 aa5.53□□□□□ -1.52
LHX9-208ENST00000615520 KRTAP12-4P60329 112 aa5.53□□□□□ -1.52
LHX9-208ENST00000615520 SPRR5A0A1B0GTR4 108 aa5.49□□□□□ -1.53
LHX9-208ENST00000615520 KRTAP6-1Q3LI64 71 aa5.48□□□□□ -1.53
LHX9-208ENST00000615520 KRTAP20-2Q3LI61 65 aa5.41□□□□□ -1.54
LHX9-208ENST00000615520 SYNE1Q8NF91 8797 aaKnown RBP5.41□□□□□ -1.54
LHX9-208ENST00000615520 AHNAK2Q8IVF2 5795 aa5.39□□□□□ -1.55
LHX9-208ENST00000615520 KRTAP9-4Q9BYQ2 154 aa5.29□□□□□ -1.56
LHX9-208ENST00000615520 KRTAP5-10Q6L8G5 202 aa5.25□□□□□ -1.57
LHX9-208ENST00000615520 KRTAP5-3Q6L8H2 238 aa5.19□□□□□ -1.58
LHX9-208ENST00000615520 LUZP6Q538Z0 58 aa5.18□□□□□ -1.58
LHX9-208ENST00000615520 KRTAP6-2Q3LI66 62 aa5.15□□□□□ -1.59
LHX9-208ENST00000615520 KRTAP5-2Q701N4 177 aa5.09□□□□□ -1.59
LHX9-208ENST00000615520 H3BS24 57 aa5.05□□□□□ -1.6
LHX9-208ENST00000615520 MT3P25713 68 aa5.05□□□□□ -1.6
LHX9-208ENST00000615520 KRTAP5-7Q6L8G8 165 aa5.05□□□□□ -1.6
LHX9-208ENST00000615520 KRTAP4-11Q9BYQ6 195 aa4.82□□□□□ -1.64
LHX9-208ENST00000615520 KRTAP4-12Q9BQ66 201 aa4.74□□□□□ -1.65
LHX9-208ENST00000615520 OBSCNQ5VST9 7968 aa4.7□□□□□ -1.66
LHX9-208ENST00000615520 NDUFAF8A1L188 74 aa4.65□□□□□ -1.67
LHX9-208ENST00000615520 KRTAP5-8O75690 187 aa4.65□□□□□ -1.67
LHX9-208ENST00000615520 AHNAKQ09666 5890 aaKnown RBP4.55□□□□□ -1.68
LHX9-208ENST00000615520 LCE3DQ9BYE3 92 aa4.53□□□□□ -1.68
LHX9-208ENST00000615520 KRTAP9-9Q9BYP9 154 aa4.52□□□□□ -1.69
LHX9-208ENST00000615520 KRTAP5-1Q6L8H4 278 aa4.48□□□□□ -1.69
LHX9-208ENST00000615520 LCE1EQ5T753 118 aa4.46□□□□□ -1.7
LHX9-208ENST00000615520 MUC5ACP98088 5654 aa4.44□□□□□ -1.7
LHX9-208ENST00000615520 MUC5BQ9HC84 5762 aaPredicted RBP4.44□□□□□ -1.7
LHX9-208ENST00000615520 LCE3EQ5T5B0 92 aa4.34□□□□□ -1.71
LHX9-208ENST00000615520 LCE1BQ5T7P3 118 aa4.28□□□□□ -1.72
LHX9-208ENST00000615520 KRTAP4-2Q9BYR5 136 aa4.18□□□□□ -1.74
LHX9-208ENST00000615520 LCE1CQ5T751 118 aa4.15□□□□□ -1.75
LHX9-208ENST00000615520 A0A0A0MQY5 61 aa3.95□□□□□ -1.78
LHX9-208ENST00000615520 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.8□□□□□ -1.8
LHX9-208ENST00000615520 INE1O15225 51 aa3.78□□□□□ -1.8
LHX9-208ENST00000615520 KRTAP5-11Q6L8G4 156 aa3.71□□□□□ -1.82
LHX9-208ENST00000615520 PRM1P04553 51 aa3.56□□□□□ -1.84
LHX9-208ENST00000615520 KRTAP21-2Q3LI59 83 aa3.56□□□□□ -1.84
LHX9-208ENST00000615520 LCE1FQ5T754 118 aa3.48□□□□□ -1.85
LHX9-208ENST00000615520 KRTAP4-4Q9BYR3 166 aa3.28□□□□□ -1.88
LHX9-208ENST00000615520 PHGR1C9JFL3 82 aa3.2□□□□□ -1.9
LHX9-208ENST00000615520 MUC19Q7Z5P9 8384 aa2.85□□□□□ -1.95
LHX9-208ENST00000615520 KRTAP21-1Q3LI58 79 aa2.34□□□□□ -2.03
LHX9-208ENST00000615520 MUC16Q8WXI7 14507 aa2.07□□□□□ -2.08
Retrieved 78 of 20,778 RNA–protein pairs in 41.3 ms